Oenanthe melanoleuca (Eastern black-eared wheatear): 130250925
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Entry
130250925 CDS
T09236
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130250925 (GEN1)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
130250925 (GEN1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
130250925
NCBI-ProteinID:
XP_056343087
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Position
3:complement(10388698..10407575)
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AA seq
933 aa
AA seq
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MGVTYLWQILEPVRQPVNMSSLRGKTLAVDLSLWVCEAQTVKKMVGVVTKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSKRNEMRYGPSKKAGPVRTGRSLFKAILKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGLVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
SYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIETLRGQNLLQRFER
WKEQFQYDDNPPVAVKRVIHCSECHHPGSYKEHEHNGCKFCENMRCCKPRDSKHCCPCAW
HQWEQVKQANAVEDSIRKKAKSCEGFPFSEVIQEFLVNKNKLTNIKECRRPDLLSFQLFA
SEKMEWTKHYACKKLLALLTRYDMIQRKSGYIDSKQLQAIRIVKTRIKNGIPCFEIEWQK
PEHYVEPEDEPVELFVVTLEEESLFQAAYPDVVALYQMEKSEVLQKKQKKKKDRPEEKIL
PNAYDEVTSLLSQMNLKPTYRILPGQHSLSDTKAPPEDRTQQRSTGSKDVASCTSTVHVS
ASAAALADSSVPSQCTKYSGMSSSSSVPAGLQLSSADGKGTSFSTSPAHGGDDHDPAADF
TTCIKHSHPLSHETVRNSSEYSDVTQSDMHSGSEDDLFSNDAMGQLQEWSLSERILKKAL
ISSQPFSEDLVQLESLNCFKQSKETLNPDRNHVSSSCQLNNLVQESKNVLSESSTTESSV
RIYQDAYKKADILAEMVKKKTHISGAACLAFSGQATETLHPGCEMLPASQKPAHATGCHI
KEACIETTWKASSKKSVCQNRCSSSEDSDDGHVDKILVYDQQKRQLNPGQFKKCFTKKRS
SVVTSKRTNSDSALLIKGKKKTTNVKEAVNSFSRQVSLKPSSVEEVNFSQSPEQPTERLG
SPTQQDKSAVLTSAWADSPLPLSERLKRRIKIN
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgacttacctgtggcaaatccttgagcctgtgagacaacctgtcaacatgagt
agtctcagagggaaaacacttgctgttgatttaagtttgtgggtttgtgaagcacagact
gttaaaaagatggttggagtggttaccaagccacatctcagaaacctgttttttcggttc
tctttctttacatcaatgggaattaaacttgtatttgtcatggagggagaggcccccagg
ttgaaagcagacaccatgagcaagaggaatgagatgcgctatgggccttcaaaaaaagct
ggacctgtaaggacagggagatctttatttaaagccatattaaaagagtgtcttgaactg
ttggagtgtttaggtgtcccttgggttcaagcagctggagaagcagaggcaatgtgtgcc
tacctaaatgcaaaaggacttgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctcaaacagtttataggaactttgccatgaatgctaaggatccacatcttgac
agttacacaatgtcctctattaaagagaaacttggttgtgacagagagtctttgattggg
ctagcagttcttctgggctgtgattatcttccaaagggggttccaggagtagggaaggaa
caagctttaaagttaattgagactctgcgaggtcaaaatttactgcaaaggtttgagcgg
tggaaggaacaatttcaatatgatgataatccacctgtggctgttaaaagggtaattcac
tgttcagagtgccaccatccaggatcttacaaggaacatgagcacaatggatgtaaattc
tgtgaaaacatgagatgctgcaaacccagggactccaaacactgctgcccttgtgcatgg
catcagtgggagcaagtgaaacaagcaaatgcagtggaggacagtatcagaaaaaaagcc
aagagttgtgagggctttccattttctgaggttatccaagagtttcttgtgaacaagaat
aaattgaccaacataaaggaatgtcgaaggccagatttattgtcctttcagctatttgct
tcagagaagatggaatggaccaaacattatgcttgtaagaagctgttagcacttttgaca
cgttatgatatgatccagagaaaatctggatacattgactcaaaacaactgcaggcaata
cggattgttaagacacgtattaaaaatggaattccttgttttgaaattgaatggcaaaaa
ccagaacattatgttgagccagaagatgagcctgtggagttgtttgtagtcacactagaa
gaagagtctttgtttcaggctgcttatcctgatgttgttgccctctatcaaatggaaaag
tcagaagttcttcagaagaaacagaaaaaaaagaaagacagaccagaagaaaagatatta
ccaaatgcttatgatgaagttaccagtcttctgtctcaaatgaatttaaagcctacatac
agaattcttcctgggcagcactccttgtcagatacaaaagctcccccagaagatcggaca
cagcagagaagtacagggtcaaaagatgtagcttcctgcacatcaactgttcatgtgtca
gcatcagcagctgctcttgctgactcatctgtgccctcacagtgcactaagtattcaggg
atgtcatcctcttcctctgtaccagctggtctgcaactgagcagtgctgatgggaaagga
acctctttcagcacttcaccagcccatggaggtgatgaccatgatccagcagctgacttc
accacatgcataaaacactcacacccactaagtcatgaaacagtaagaaacagctcagaa
tattcagatgttacacagtctgatatgcattctggtagtgaagatgatttgttctcaaat
gatgctatgggacaacttcaggagtggtctttaagcgagcgaatacttaagaaggctctc
atttcatcacagcctttttctgaagatttagtgcagctggaatctttgaattgttttaaa
caatcaaaagaaacattgaatcctgatagaaatcatgtctcttcctcatgtcagttaaat
aacctagtgcaggaaagtaaaaatgttctatcagaaagctccacaactgaatccagcgta
cgtatatatcaagatgcatacaaaaaagctgacatcctggctgaaatggtgaaaaaaaaa
acccatataagtggggcagcatgtctagccttcagtgggcaagcaacagagactcttcat
cctggatgtgaaatgcttccagcatctcaaaagccagcacatgcaactggctgtcacatt
aaagaagcttgtattgaaactacttggaaagcttcttctaaaaagagtgtctgtcagaac
agatgctcttctagtgaagacagtgatgatgggcatgtggataaaatcctggtttatgac
cagcagaaaaggcaactgaaccctggccagtttaaaaaatgttttacaaagaaaaggagc
agtgttgttactagtaaaaggacaaacagtgattcagcccttttaattaaagggaagaag
aaaaccactaatgtaaaggaagctgttaatagtttctcaaggcaggtatctctaaaacca
tcctctgtagaggaagttaatttttcccaaagtccagagcaaccaactgaaagattgggc
tctcccacacagcaagacaaaagtgctgttctgacttctgcgtgggcagacagtcccctt
cccctgtctgaaagactgaaaagaagaatcaaaatcaattag
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