Oenanthe melanoleuca (Eastern black-eared wheatear): 130251012
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Entry
130251012 CDS
T09236
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04517
IgSF CAM signaling
oma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
130251012 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130251012 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oma04812
]
130251012 (SPTBN1)
Cytoskeleton proteins [BR:
oma04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130251012 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
130251012 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
130251012
NCBI-ProteinID:
XP_056343286
LinkDB
All DBs
Position
3:98623497..98735963
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVAEDGDSQQQWDGTKGEQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPVPSPTSERKAKSGVQAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccacggtagcgacagattacgacaacatcgagatccagcagcagtacagcgac
gtcaacaaccgctgggatgtcgacgactgggacaacgagaacagctctgctcggctcttc
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacctggcccgtgtgtcctgccggatcacagacctgtacact
gaccttcgggatgggaggatgctcatcaaactcctggaagtgctttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcaacgagtgcacctggaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggcctcatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaagacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaacgtcaatatccacaacttcacaaca
agctggagggatggcatggccttcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatcttcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaagctcctggaccccgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgccattgaaaca
gagaaaatgatagaaaaatacgagtccctggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaaccgcaagtttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaactcgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagcgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcacgaggccatcgagacggacatcgcggcgtacgaggagcgggtgcaggcc
gtggtggcggtggccaaggagctggagaccgagaactaccacgacatcaagcgcatcacc
gccaggaaggacaacgtcatccgcctctgggagtacctcctggagctgctgcgggcgcgc
cggcagcgcctggagatgaacctggggctgcagaagatcttccaggaaatgctctacatc
atggactggatggacgagatgaaggtgcttttgctgtcccaagactatggcaaacatttg
ttgggagttgaagacctgctgcagaaacatgctctggtagaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgcaactgatggagaaggt
tacaagccctgtgacccgcaggtgatcagggaccgcgtggctcacatggagttctgctac
caggagctctgccagctggcggccgagcgccgcgcgcgcctcgaggagtcccggcgcctc
tggaaattcttctgggaaatggctgaggaggaaggctggatcagggagaaggagcagatc
ctgtcatccgatgactacgggaaggacctaaccagcgtcgtccgactcttgagtaagcac
aaggcgtttgaggacgagatgagcggccgcagcggccactttcagcaggcgattaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagctgtctgccatcaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgacgctgacgatatcgacgcgtggatg
ttggacatcctcaagattgtgtccagcaatgatgttggccacgatgaatattccacacag
tccttggtgaagaagcacaaagacgtggccgaggagattgcgagctaccggccgaccatc
gactccctgcacgagcaggccaaggccctgccgcaggagcacgccgagtccccggacgtg
cagggcaggctgtccgggatcgaggagaggtacaaggaggtggctgagctcacccggctg
cgcaagcaagccctgcaggacaccctcgctctctataagatgttcagtgaggctgatgct
tgtgagctttggatcgacgaaaaggagaagtggctgaacaatatgcagattccagagaag
ctggaggacctggaagtgatccagcacagatttgaaagcttggagccagaaatgaacaac
caggcatcccgtgtggccgtggtgaaccagattgccaggcagctgatgcacagcggccac
cccggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaacttgtagataggaagaaggatgctctgctctctgctctgagtatccagaactaccac
cttgaatgtaatgagaccaaatcctggatcagggaaaagaccaaagtgattgaatccaca
caagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcagaaggaggcagagaag
ctggaatcagagcatcctgaccaggcacaagccatcctgtcacggcttgcagagatcaat
gatgtgtgggaggaaatgaagaccaccctgaagaaccgggaagagtccctgggagaggcc
agcaagctgcagcagttcctgagagatctggatgacttccagtcgtggctctccagaaca
cagactgcaattgcctccgaggacatgcccaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaacgagatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcaaaccgacgctcagtacatgttcctgcgc
cagcgcctccaggctttggacaccggctggaatgagctccacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaactaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaac
gaagaaaagatcaatgcagttgtggagacaggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaggtggactctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttctgatgagactgaaagataacagggatctccaaaagtttctt
caggattgccaggagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctatgatgaggcaaggaacctgcacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggaggggatgcagctcatt
gcagagaagccagagactgaggccgtggtgaaggagaagctgacaggtctccaccaaatg
tgggacgagcttgaatccaccacccagaccaaggctcagcgtctcttcgatgcaaacaag
gcagagcttttcacccagagctgtgcagacctggacaagtggctgaatggtttggagagc
caaatccagtcggatgactacggcaaggatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcagagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaaacgcctt
actgtagaaaagaaattcttggagctgctggagcctttgaatgagaggaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtggaagatgaaattttgtgggtc
ggagagaggatgcccatagctacatctactgatcatggacacaacctccagactgtgcag
ctactaataaagaaaaatcagaccctacagaaagaaatccagggccaccagcctcgtatc
gatgacattttcgagaggagtcagaacatcatcacagagagcagccccaatgctgaggtc
attcagcagagacttgcagacctgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggcgcagcagtattacttcgatgcagcc
gaggccgaggcctggatgagcgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgcagtgtccatgctgaagaaacaccagattttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcggcagtccaaggtggacaagctgtacgcaggc
ctgaaggacctggctgaggagaggaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggatgacctggagcagtggatcgccgagagggaggtggtggcaggg
tcccacgagctgggccaggactacgagcacgtcacgatgctgcaggagcgcttccgcgag
ttcgcccgcgacaccgggaacatcgggcaggagcgcgtggacaccgtgaaccacatggcc
gacgagctcatcaactccggccactcggacgccgccaccatcgccgagtggaaggacggg
ctgaacgaggcctgggccgacctgctggagctcattgacaccaggacacagatcctcgcg
gcctcctacgaactgcacaaattctaccacgacgccaaggagatcttagggcgcatccag
gacaagcataagaaactgcccgaggagcttggcagagaccaaaacacggtggaaacgcta
cagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcggcag
ctgcaggaagatgcagcacgcctccaggctgcctacgctggggacaaggctgatgacatc
cagaagagggagaacgaggtcctggaggcgtggaaggcactgctggatgcctgtgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggtgcgggat
ctcatgctctggatggaggatgttatccggcagatagaggcccaggaaaagccaagggat
gtttcatctgtggaactcctcatgaacaatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tacgcatctgaggagatcaaggaaaagctgctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgccagcgtggctgaggcctggctgctgggacaggagccctacctgtccagc
cgtgagatagggcagagcgtggacgaggtggagaaactaatcaagaggcacgaggcgttt
gagaaatccgcagccacctgggacgagaggtttgcagctctggagagactgaccacgctg
gaactgctggaagtgcgtcggcagcaggaggaggaggagcggaagaggcagccgcccact
ccggagcccaaggttgcagaggatggagactcccagcagcaatgggatgggacaaaagga
gagcaggtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaacgaaatggtcaatggagctgcagagcagaggacgagttccaaagagtcc
agtcccgttccctccccgacgtcagagcgcaaagccaagagcggcgttcaggcgcagact
gctgccaccctcccagccaaaacgcaggagatcccctcggcccagatggagggcttctta
caccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcacaat
gtgtactgtgtcatcaacaaccaagagatgggtttctacaaggactcaaaagctgctgct
tctggcatcccttaccacaacgagatccccgtcagcttgaaggacgcagtgtgcgaagta
gcggtggattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaacgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggatccaggccatcacatca
gcaatctcttcagacaaaatcgaggtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaggagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
