Oenanthe melanoleuca (Eastern black-eared wheatear): 130251017
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Entry
130251017 CDS
T09236
Symbol
TRERF1
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130251017 (TRERF1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
130251017 (TRERF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_6
ELM2
zf-C2H2_4
zf-C2H2
Myb_DNA-binding
zf-met
Myb_DNA-bind_7
Myb_DNA-bind_6
Zn_SUZ12
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
130251017
NCBI-ProteinID:
XP_056343295
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All DBs
Position
3:86899716..86995169
Genome browser
AA seq
1165 aa
AA seq
DB search
MGDQQLYKTNHTANNNENLYYEQHQMNSLPSLNHSYGTSVLDAPQASPLSPPFPQDSRDS
IALPVGSKSLGSMDTSRQTSWTHSGSGNHVPARNSLNNQSAMWSPLGQGESHDGYQYSYP
QPSENRSQKITSGALHKLDSFTQVFANQNLRIQVSNMAQVLHSESSMVDNSGDSALRQLL
SQKPPVEQQPSTVTSTVQRYQPLPQQAHQNFASTQQKQQMQVMQHPQLYYDYQQHLSQMQ
MHSAFQQGQAHVPQMQSQQLLPQQMQHLQQPQYYAQPQQGHQRLSMQEMQQQQPARQQRQ
CPVQIAQYYQTQPVMQQLQQQQQQMQLPLPPYHREPDPKTMHEPHQYSQDPGHPVQLIQL
GAVPQYCFQDPHEQYRHLYPQSLLQQQDQQKQYLSESRVPSLNSHLGLTPPETAEDPARQ
DINSLGNAVPHRTLLAPSGVHLNSKGSQQDSPSTTWPQQVQLSDGRLQPLSPEQSGQNRE
TLLERADAKNKLMCSICLKEFKSLPALNGHMRSHGGVRASPNFKQDEGEKPPQQPLCKEV
DGLAPIVMPVSVPVKLLSPEPSTQPSASAATVTDKPASSVSDDEMPVLVKMTYSPPCSPK
VANPCSSSETSKKPHPSAVKLEENFKPLQDKKKYRHRPEPLFIPPPSFNLSVPHSGATLY
QSQLRSPRVLGDHLLERPHELPPYTPPPMLSPVRQGSGLFSSVLTSSHSAAHAQLPLTPL
TPTPRVLLCRSNSIDGSVIPVTPGPGEQTVEPRINIGSRFQADIPELQDRLLMEKDVHNA
TLVWKPWPELENKVFQQRVEDLLNMSCSSVLPGGGTNSEYALHSLFEAKGDIMVALEKLL
LRKPVRLKCHPLSNYHYAGSDKWTHQERRLFKEALSTYSKDFIFVQKMVKSKTVAQCVEY
YYTWKKILRLGRKHRTRLEKKRDECLTSGEEEVLEEDEEIEEDRKEEREMQKSPDPPAIS
LVGPIDLPAVQGLSLSSSSFICEMPNCGAVFSSRQALNGHARIHGGTNQVPKPRCLVPGT
KQKSGTQSGYCSIKSSPAHSTTSGETDPTTIFPCKECGKVFFKIKSRNAHMKTHRQQEEQ
QRQKAQKAAVAAEMAATIARTTGPAGHSLIPLDHMSLVKHVENVGDIDDDVVPDLGDVME
ENEVMDADLLLDDEDPDLLQDDAEL
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgggggaccagcaattgtataaaactaatcatactgccaacaacaatgagaacttgtac
tacgaacaacaccaaatgaactcccttccatctctaaaccacagctatgggacatctgtt
ctggatgctccccaggcgtcccccctctcccctccatttccccaagattcaagggacagt
atagctttgcctgtaggttcaaaaagtcttgggtcgatggatacatctagacaaaccagt
tggacacattctggctcaggaaaccacgtcccagcgaggaacagtttgaataatcaaagc
gcaatgtggagccccctcgggcagggggagtcccatgacggataccaatattcttaccct
caacccagtgaaaaccgatcgcaaaaaatcaccagtggggccctgcacaaattggactcc
tttacacaagtatttgctaaccaaaatctgagaattcaagtcagcaacatggctcaggtt
ctgcacagcgagtcttcgatggtggataattcaggagacagtgcgctcaggcagctgctg
tcccagaagccgccggttgagcaacagcccagtacagtaacttccaccgtgcagagatac
caaccactgccgcagcaagcgcaccagaattttgcaagcacacagcaaaagcaacaaatg
caagtcatgcagcacccacagttgtactatgactaccagcagcacttatcacagatgcag
atgcattctgcgttccagcagggacaggcgcacgttccgcagatgcagtcccagcagctg
ctgccgcagcagatgcagcacctgcagcagcctcagtactacgcccagccccagcaggga
caccagcgcctctcgatgcaggagatgcagcagcagcagccagctcggcagcagcggcag
tgtcccgtgcagatcgctcagtattaccaaacacagcctgtcatgcagcagttgcagcag
cagcagcagcagatgcagctgccgcttcctccgtatcacagggaacccgacccaaagact
atgcatgaaccacaccagtactctcaggatcccggtcatcctgtgcagcttatccagctg
ggagcagtgcctcagtattgcttccaggatccccacgaacagtacaggcacttgtacccc
cagagcttactgcagcagcaagatcagcagaagcaatacctgagcgagagcagagtgccg
tcgctgaactcccaccttggcctcactccaccagagaccgccgaggatcccgcgcggcag
gacatcaactccctagggaacgccgtccctcatcgaactcttttggcaccctcgggagtt
catctgaacagcaaaggctctcagcaagactcccccagcaccacgtggcctcagcaggtg
caactgtcagatggcagactgcagccactgtccccagaacaaagtggccagaacagagaa
acacttcttgagagagctgatgcgaagaacaagctaatgtgttcaatatgcttgaaggaa
tttaagagtttgcctgctctaaatggtcacatgagatcccatggaggagtaagagcatct
cctaacttcaaacaggatgaaggagagaaaccaccccagcagccgctgtgtaaggaggtg
gatggcctcgcgcccatcgtcatgccagtgtctgtccctgtcaagcttctgtcacctgag
cccagcacgcagccctctgccagcgctgccacagtcacagacaagcctgccagctctgtg
tcagatgacgagatgcccgttctcgtgaagatgacttactctccaccgtgcagtccaaaa
gtggccaacccctgctcatcctctgaaactagcaaaaaacctcatccaagcgctgtaaaa
ttggaagaaaacttcaagccgttgcaggacaagaagaagtaccggcacagacccgaaccc
ctcttcatccctcctccttccttcaacctcagcgtgccgcactcgggcgccactctgtac
cagagccagctgcgctccccgcgcgtgctgggcgatcacctgctggagcggccgcacgag
ctgccgccctacactccgccgcccatgctgagccccgtccggcagggctcggggctcttc
agcagcgtcctcacctcgtcccacagcgcggcgcacgcccagctgccgctcacgccgctc
actcccaccccacgcgtgctcctgtgtcgctccaatagtattgatggaagtgtcattcca
gtgacgcctgggcctggagaacagactgttgaaccgcgaatcaatattgggtccaggttc
caggctgacattcctgagctacaggacagattgctaatggagaaagatgtgcacaatgct
actttggtttggaaaccatggccagaactggagaacaaagtcttccaacaaagagtggaa
gaccttttaaatatgagctgttccagtgtgttacctggtggaggaactaactcagaatac
gctttgcactctctctttgaagcaaaaggagatattatggttgctcttgaaaagctgctg
ttgagaaagccagtgagattgaagtgtcatcctttgtcaaattaccactatgctggctct
gacaaatggacacatcaagaaaggagactgttcaaagaggcactatccacctacagcaaa
gatttcatttttgtacagaaaatggttaagtccaagacagttgcacaatgtgtggaatac
tactatacctggaagaaaatcttgcgtttgggacggaaacacagaacgcgtttagagaag
aaaagagatgagtgcttgacaagtggagaagaggaagtgttagaggaagatgaggagatt
gaagaagacagaaaggaagaaagggaaatgcagaagtcacctgacccaccagcaatctct
cttgttggacctatagatctgcctgccgttcagggtctttcactgtcctcatcctccttc
atctgtgaaatgccaaactgtggcgctgtgttcagttcccgccaggcgctgaacgggcac
gctcgcattcacggaggtacgaaccaggtgccgaagccacgctgcctcgttcccggcacc
aagcagaaatccggtacgcagagcgggtactgctccatcaagagctcacctgcccacagc
acaacgagcggcgagaccgacccaaccaccatctttccttgcaaggagtgtggcaaggtc
tttttcaaaatcaaaagccgcaatgcccatatgaagactcacagacaacaagaagaacag
caaaggcagaaggctcagaaagctgctgtggcagcagaaatggcagccactattgcaaga
actactgggccagctgggcatagtttgatccctctggatcacatgagtttggttaaacac
gttgaaaatgttggtgacattgatgatgatgttgttccggatctgggtgatgtcatggaa
gagaatgaagtcatggatgctgacctcttactggatgatgaagatccagatctactgcag
gatgatgctgagttgtaa
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