Oenanthe melanoleuca (Eastern black-eared wheatear): 130251075
Help
Entry
130251075 CDS
T09236
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oma03016
]
130251075 (TARBP1)
03036 Chromosome and associated proteins [BR:
oma03036
]
130251075 (TARBP1)
Enzymes [BR:
oma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
130251075 (TARBP1)
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130251075 (TARBP1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
130251075 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
130251075
NCBI-ProteinID:
XP_056343411
LinkDB
All DBs
Position
3:67075208..67105800
Genome browser
AA seq
1587 aa
AA seq
DB search
MEVVLADALLSRCGDRAALLRALSAPLCAERAEALRLLLQRLAAGGPAAAGEAEALRRAA
WEVALERCRPLLRGGEGGGERLRAARAARGALRHCVQLCGAPLAARLARDALAELAAGGG
AQEAAVEALVAAAPRLEEPELLSRCAAAALALVREEGEGEAAAALVAGRLLPALGANGAA
LPRVWEGLLGAGAAPRAGRALLALSALADALLPRGPAGTGLDARLCPRFWRLVQEGLTER
DGLCRKRARYLLKRALDLSGSQRAELRCAPDGGHECSLFWWSAEKNEQLLQFWETYILIM
ETLEGNQIHVIKPVLPKLNSLYELAISEDKGCWLFHPSWHVCIYRRMFESENKTLTKEGI
LHFLELYETKHLPNSLDFSEFVIGPLMDALSESSLYSRTPGQSVGSCPPLGLRLQKFLAT
YFTLLPEEEKGSFLLKFIQKMTSRHWCAVPVLFLSMALASIPACKVLGAEGLHALRDVLQ
CTMITHQILLRGAAQCYLLQTTMHLTDVEKVSFPEVSSFLLSLRPEESLRRDTLLWTELC
SWLQVNDKCFRKSATSDFEHQETSSLCQYVHSLVGEYLKTAASERENCFMPDWFEAKLVS
TMILLAADVEQMKNKYSGKSNIEWIELEAFLNPLLDVLMKLGSNAYIPTLRADKSLQLLL
KLLQTRWLKCSNAQDDEVLLFIWKSLVTPVESILEFILRRLTTNELSTVGDLDRCDLYLA
LIPEIVNLCLKVNWKKIPSIKNFLSSLINASIRNLQERNSEKEPKVKEQIRKVAGMASLA
AVCEIMGGKLEVHLEPLPSVDALKKFISFSQFNEVLKKPSYIEEKNSLCEETASQGWGKV
VARYVRDQWICLRFVLNSFPTLAQGHEETSVKSLSTVERSKEILQSALEALSILPSDQVS
PVFDCMKVLVPKLLDSSEALCIEAFDLAWKITSSLSNTQLIFWANLKAFVQFIFDTEVLA
VAASAKGQAYAKIKEIIFKLIDLSTTKTGVFNVALSHCCQSWIFPSVDERCALRNDFLNA
GSYSDLITEACVFGTVFRRDQRHIQDVHAFIENLGEKCAANVVTESTNRDDHYIRICAVK
FLCLLDASNISHKTFMEDIFIKLLDKDELVSRSRTRYYANSLQHRIKTRVWQTLLVLLPK
LNQNFLCGTLDRVFQAGFSNNQASVKYFIEWMVILCLHKYPQFLDKFWDCFCYDEEKLKK
SICTFLSVLAHFDIILENTSEKKPAVKKALIVVLQWCFSHNFSVRLYALIALKKIWGMCR
MLHVEEFAALTPVIESSLQQVENMHGTGNARRNWQRIQDHFFFATFHPVEDYSLETIFYT
LPRLSELAEDEWMSLSKFDRFTDIPLPAAFQWCHSRAELRDLKPSDWSQQDMGKTQPVCI
HCSHSAEADSQPEWTDVQKKIIPWKNSTPSLDLETAFEDRAAKLGKSNSRLIVVASLIDK
PTNLGGLCRTSEIFGASALVVGSLHYIQDKQFQHLSVSAEQWLPLVEVKPCQLVDYLQQK
KTEGYTIIGVEQTAKSFDLTEYCFPEKSLLLLGNEHEGIPANLIHHLDVCVEIPQQGIIR
SLNVHVSGALLIWEYTRQQVIKQKQQQ
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggtgctggcggacgcgctgctgtcccgctgcggggaccgcgccgcgctgctg
cgggcgctcagcgcgccgctctgcgccgagcgggcggaggcgctgcgcctgctgctgcag
cgcctggcggcgggcgggccggcggcggcgggcgaggcggaggcgctgcggcgggcggcc
tgggaggtggcgctggagcggtgccggccgctgctgcggggcggcgagggcggcggggag
cggctgcgggcggcgcgggcggcgcggggcgcgctgcggcactgcgtgcagctctgcggg
gcgccgctggcggcgcgcctggcccgcgacgcgctggccgagctggcggcgggcggcggc
gcgcaggaggcggcggtggaggcgctggtggcggcggcgccgcggctggaggagccggag
ctgctgtcgcggtgcgcggcggcggcgctggcgctggtgcgggaggagggcgagggcgag
gcggcggcggcgctggtggccgggcggctgctgccggcgctgggcgcgaacggcgcggcg
ctgccgcgcgtctgggaggggctgctgggcgcgggcgcggcgccgcgggccgggcgggcg
ctgctggccctcagcgcgctggcggacgcgctgctgccgcggggccccgcggggacgggg
ctggacgcgcggctgtgcccgcgcttctggcggctggtgcaggagggcctgacggagcgg
gacgggctgtgccgcaagcgggcccgctacctgctgaagagagcgctggacctgagcggc
agccagcgcgccgagctgcgctgcgccccggacggcgggcacgaatgcagtctgttttgg
tggtctgctgagaagaacgagcagctcctgcagttttgggaaacttacattttgataatg
gaaactttggaaggaaaccagatccatgtcataaagccagtattaccaaaactaaacagt
ttatatgagcttgccatatcagaggataaaggttgttggctgtttcacccatcgtggcat
gtgtgcatttatagacgaatgtttgagagtgagaataaaacactgacaaaggaaggaatt
cttcattttctggagctttacgaaacaaagcatcttccaaattcacttgatttctcagag
tttgttattggaccactaatggatgccctctcagaaagttccctctacagcaggacacca
ggtcaatcagtaggatcctgtcctcctttgggattgaggttacagaagtttttggctact
tatttcactcttcttccagaagaagaaaaaggtagcttcctgttaaaatttattcagaag
atgacaagtagacattggtgtgctgttcctgttttgtttctttctatggctttggcatct
atccctgcatgtaaagtacttggtgctgaaggacttcatgctttaagggatgtcctccag
tgtactatgattacacatcagattttgttgcgtggagctgctcagtgctatcttcttcaa
acaactatgcatttgacagatgtggagaaagtgtccttcccagaagtttcaagctttctt
ctgtcccttagaccagaggaatccctgaggagagatactttgttatggacagagctttgc
agctggctgcaggtgaatgacaagtgcttcaggaagtctgcaacctctgattttgaacat
caggagacatcatcattatgtcaatatgtgcacagtctggtgggagagtaccttaagaca
gctgcatctgaaagagaaaattgctttatgcctgactggtttgaagctaagcttgtctca
acaatgattctgttggctgctgacgtggagcagatgaagaataaatacagtggaaaaagc
aacatagagtggattgaactagaggctttcttgaaccctcttctggatgtcttgatgaaa
cttggcagtaatgcttacataccaacactgagagcagataaaagccttcagcttctcttg
aagttattgcagacccgttggttaaaatgttccaatgcacaagatgatgaagtactgctc
tttatctggaaatctcttgtgacacctgtggagagtattcttgaatttattctccgacgg
ttgactaccaacgagttaagcactgttggtgacctggatcgttgtgatctgtacttggct
ttaattccagagatagtgaatttgtgcttgaaagtcaactggaagaaaataccatctatc
aagaatttcctttcatccctgataaatgcgtctattcgcaatcttcaggagagaaattct
gaaaaggagccaaaggttaaggaacaaattaggaaagtagctggcatggcttcccttgca
gctgtatgtgagataatgggtgggaagctggaagtgcacctggaacctttgccttctgtg
gatgctctgaagaaattcatttccttttctcaattcaatgaagtattaaagaaaccatct
tatattgaagaaaaaaacagcttatgtgaagaaacagcatctcaaggatgggggaaggtt
gttgcacgctatgttcgtgaccagtggatttgccttcgttttgtcttaaattcatttcca
actttggctcaagggcatgaagaaacttcagtaaagtcactgtctacagttgaaaggtca
aaagaaattctgcagtctgcattagaagccctgtctattcttccttcagaccaagtttca
cctgtgtttgactgcatgaaagtccttgttcccaagctcctggactcatcagaggctctc
tgcatagaagcttttgatttggcttggaaaattacatcctctttgagcaacacacagcta
atattttgggccaatctaaaggcttttgttcagttcatctttgatactgaggttctagct
gttgctgcaagtgcaaaaggtcaagcatatgccaaaataaaagagataattttcaagctc
atagatctgtccactacaaagactggagtcttcaatgtagcccttagtcattgttgtcag
tcttggatatttcccagtgttgatgagagatgtgccttgagaaatgatttcttaaatgct
ggaagttatagtgaccttatcactgaagcttgtgtctttggaactgtatttaggagagat
caaagacacattcaggatgtgcatgccttcatagaaaatcttggagaaaaatgtgcagca
aatgttgttacagaaagtacaaatcgagatgatcactacattcgcatttgtgctgttaaa
tttctgtgcttgttggatgcatcaaatatctcacacaagacatttatggaagacattttt
atcaaactactcgataaggatgagctggtatccagatctagaacacgctattatgcaaac
tctttgcagcataggattaaaacccgggtatggcagacactcttagtgcttctcccaaag
cttaaccagaattttttgtgtggaactcttgacagagtttttcaggctggattcagtaat
aatcaggcatctgtgaaatacttcatagaatggatggttatcttgtgtctacataaatat
ccccaattccttgataaattctgggattgcttttgctatgatgaagaaaagctgaaaaaa
agcatctgcacatttttatcagtgttggcccactttgacatcattcttgaaaatacctca
gagaagaagccagctgtgaagaaagccctcatagttgttctgcagtggtgtttcagccat
aatttcagcgttcgactttatgcattaatcgcccttaaaaaaatctggggtatgtgcagg
atgctgcatgtggaagaatttgcagctctgacaccagttattgaatctagccttcagcaa
gtggaaaacatgcatggcacagggaatgccagaaggaactggcagcgaatccaagatcac
ttcttttttgcaacatttcatccagttgaggattacagtctagagacgatattttacaca
cttccccgcctttcggaactcgctgaagatgaatggatgtccctctccaagtttgacaga
ttcactgacattcctctgccagcagcatttcagtggtgccactcccgagcagagcttcga
gatctgaaaccaagtgactggtctcagcaagacatgggtaaaacacaaccagtctgcatt
cattgttcacattcagctgaagcagacagccagccagagtggactgatgttcagaaaaag
attataccctggaagaacagtactcctagcttagacttggaaacagcatttgaggatcgt
gctgctaaacttggcaaatcaaacagcagattgattgtggtggcttcacttattgataaa
cctaccaatttaggaggtttatgtcgtacaagtgaaatatttggggcatctgcactagtt
gttggcagtcttcactatatacaggataagcagtttcagcatctgagtgtttctgcagag
cagtggctcccccttgtcgaggtgaaaccatgtcagcttgttgattatttacagcagaag
aaaacagaaggctacactattattggtgtggagcagacagctaagagttttgatcttaca
gaatattgcttcccagagaaatcactattattgctgggaaatgaacatgaaggaatccca
gccaacctgattcaccatctggatgtgtgtgtggaaattcctcagcagggcattattcgg
tcgctcaatgtccatgtgagcggagctctgctgatctgggagtacacaagacaacaagtg
atcaagcaaaagcagcagcagtga
DBGET
integrated database retrieval system
