Oenanthe melanoleuca (Eastern black-eared wheatear): 130251377
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Entry
130251377 CDS
T09236
Symbol
SRF
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130251377 (SRF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130251377 (SRF)
Transcription factors [BR:
oma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
130251377 (SRF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
130251377
NCBI-ProteinID:
XP_056343921
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Position
3:complement(104796312..104810295)
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AA seq
482 aa
AA seq
DB search
MLPSQAGAGNGAAAALACGSGLGRSPVPRGANGGGAAAGAPGGRLKREALYSGSEGDSES
AEEEELGGERRGVKRGLAEAAAAAAGPAAGAAAAAAYSGGGGGGAVSGAKPGKKTRGRVK
IKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPM
ITSETGKALIQTCLNSPDSPPRSDPTTDQRMSATGFEETDLTYQVSESDSSGETKDTLKP
AFTVTNLPGTTSIQTAPTTSTSMQVSSGPSFPITNYLAPVSASISPNAVTSANGTVLKTT
GASAVTSGGLMPIPTGFTLMSGGTMAQQVPVQAIQVHQAPQQTSPSSDSSTDLTQTSSSG
TVTLPATIMTSSVPTTVGGHMMYPSPHAVMYAPTSGLADGGLAVLNAFPQAPSAMQVSHS
QVQDQGGVPQVFLTAPSGTVQIPVSAVQLHQMAVIGQQSSSGSSLTELQVVNLDTSHSVK
SD
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgagccaggccggggccgggaacggcgccgccgctgcgctggcctgcggctcg
gggctgggccggtcgccggtgccgcgtggggcaaacggcggcggggcggcggcgggggcg
cccgggggccgcctgaagcgggaggcgctgtacagcggcagcgagggcgactcggagtcg
gctgaggaggaggagctgggcggcgagcggcgcggcgtgaagcgtggcctggccgaggcg
gcggcagcggcggcggggcccgcggcgggagcggcggcggcggccgcctacagcggcggc
gggggcggcggggccgtgagcggcgccaagcccgggaagaagacgcggggccgggtaaag
atcaagatggagttcatcgacaacaagctgcggcgctacaccaccttcagcaagaggaag
accggcatcatgaagaaggcctatgagctctccacgctgactggcactcaagtcctgctg
ttggtggccagcgagacgggccatgtgtacacgtttgccacgcggaaactgcagcccatg
atcaccagcgagacggggaaggcgctgatccaaacatgcctcaattccccggactcaccc
ccacgctcggaccccaccactgaccagcgcatgagtgccactggttttgaggagacggac
ctcacctaccaggtgtccgagtcggacagcagcggggagaccaaggacaccctgaaaccc
gcattcactgtcaccaacctgccgggaacaacatccatccagacagccccgaccacctca
acctccatgcaggtcagcagtggcccgtcattccccatcactaattacctggcgccagtg
tctgccagcatcagccccaatgccgtcaccagtgccaacgggacagtgctgaagactact
ggagccagtgcagtgacgtctgggggcctcatgccgatacccactggcttcaccctcatg
tcaggtggtaccatggctcagcaggttccagtccaggcaatccaggtgcaccaggcaccg
cagcaaacgtctccctctagtgacagcagcactgaccttacccagacctcttccagcgga
acagtgaccctcccagcgaccatcatgacatcgtctgtgccaaccactgtgggcggccac
atgatgtacccgagcccgcacgcggtgatgtacgcgcccacctccggcctggccgacggt
gggctcgcggtgctcaacgctttcccacaggcgccctcagcgatgcaggtgtcccacagc
caggtccaggatcagggtggtgtcccccaggtgttcctgacagccccatcaggcacggtt
caaatcccagtctcagctgtccaacttcaccagatggctgtcatcgggcagcagagcagc
agtggcagcagcctgacagagctgcaggtggtcaacttggacacctcacacagcgtcaag
agtgactga
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