Oenanthe melanoleuca (Eastern black-eared wheatear): 130252109
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Entry
130252109 CDS
T09236
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04140
Autophagy - animal
oma04148
Efferocytosis
oma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130252109 (VPS16)
04148 Efferocytosis
130252109 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130252109 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130252109 (VPS16)
Membrane trafficking [BR:
oma04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130252109 (VPS16)
Hops complex
130252109 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
130252109
NCBI-ProteinID:
XP_056345303
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Position
4:complement(67859879..67875874)
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AA seq
837 aa
AA seq
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MDCYTANWNPLGEETFYRKLELYSMEWGLREDLRDCVVAAAPYGGPIALLRNSRRDKTPG
ARPLLEIYSASGLLLASVPWKSGRLVHLGWTAGEDLLCIQEDGTVLVYNLFCEFKRHFSM
GNEVLQNHVLEAQVFHTEFGTGVAILTGALRFSLATNIDDLKLRRLPEVPGLQKPPACWA
VLSQDRVTVVLLAVGQELFLLDNTSCSVLSPPGLSPSAGPFLHMAVSFTHRHLALFSDSG
TVWMGTASLKEKFCEFNTGIRSPPKQMVWCTRPRSRQRAVVLAWERQLMVVGNSSECIRF
VLDEDSHLVPELDGVRILSRTCHEFLHEIPEASQEIFRIASMAPGALLLEAQKEYEKESQ
KADEYLREIREQQLLPEAVGQCIEAAGYEHEPETQKSLLRAASFGKCFLDKFPPEGFVRM
CQDLRVLNAIRDYQIGIPLTFTQYKQLTIEVLLDRLVLRRLYPLAIRICEFLRLPEMQGV
SRILAHWACYKVQQKDKSDEEVAQAINQKLGDTAGISYSDIATRAYDCGRAELAIKLLEY
EPRSGEQVPLLLKMKRSKLALGKAIESGDTDLVYTVVLHLKNELNRGSFFMTLQNQPVAL
SLYRQFCRHQERETLKDLYNQDDNHQELGNLHVQGGYCQQRIEGRVASLQNALDEFYKAK
NDFAAKATEEQIKLLRLQRQLQEELDKPYLDLSLHDTVATLILDGHHKRAEQLYRDFKIP
DKRYWWLKINALATRGDWEEMEKFSKSKKSPIGYLPFVEVAVKHHNRYEAKKYAPRVPPE
QRVRAFVLVGDLEQAAEAAMERKNEAEMSLVLARCSAGTDGALAEKLNRARAQLLKK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggattgttacacggccaactggaacccgctgggcgaggagaccttctaccggaagctg
gagctctactccatggaatgggggctgcgggaggacctgcgtgactgcgtggtggcagct
gctccttacgggggtcccatcgctctgctgaggaattcccggcgggacaaaacccccggt
gcccgcccgctcctggagatctactcggcctcggggctgctcctggccagcgtcccgtgg
aagagcggccgcctggtgcacctgggctggacagcaggggaggacctgctgtgcatccag
gaggatgggactgtgctggtctacaacctgttctgcgagttcaagaggcacttcagcatg
ggaaacgaggtgctgcagaaccacgtgctggaggcgcaggttttccacacggagttcggc
acgggcgtggccatcctgacgggggcgctgcgcttctccctcgccaccaacatcgacgac
ctcaagctgcgccgcctgcccgaggtgcctgggctgcagaagcccccagcctgctgggcc
gtgctgtcccaggacagggtgactgtggtgctgctggctgtgggacaggagctcttcctg
ctggacaacacctcctgctctgtgctgagccccccagggctgagcccctcggcggggccc
ttcctgcacatggctgtgtccttcacccaccggcacctcgccctcttctccgactctggc
accgtctggatgggcacagcctcgctcaaggaaaaattctgcgagttcaacaccggcatc
cgatccccgcccaagcagatggtgtggtgcacgcggccccgcagccggcagcgagccgtg
gtgctggcctgggagcggcagctgatggtggtgggcaactcctcggagtgcatccgcttt
gtcctggatgaggattcccacctggtgcccgagctggacggggtccggatcctgtcccgc
acctgccacgagttcctgcacgagatcccagaggccagccaggagattttccgcatcgcc
tccatggctccgggtgctctgctgctggaggcacagaaggagtacgagaaggagagccag
aaagccgacgagtacctgcgggagatccgggagcagcagctgctccccgaggccgtgggc
cagtgcatcgaggctgcgggctacgagcacgagcctgagacacagaaatccctgctgagg
gcagcttcctttgggaagtgtttcctggacaagtttccccccgaggggtttgtgaggatg
tgccaggacctgcgggtgctcaacgccatccgggactaccagatcgggatcccgctcacc
ttcacccaatacaagcagctcaccatcgaggtgctgctggacaggctggtgctgcgccgc
ctgtaccccttggccatccggatctgcgagttcctgcggctgcccgagatgcagggcgtc
agccgcatcctggcgcactgggcctgctacaaggtgcagcagaaggacaagtctgacgag
gaggtggcgcaggccatcaaccagaagctgggggacacggcggggatctcctactcggac
atcgccacccgcgcctacgactgcggccgcgccgagctggccatcaagctgctggagtac
gagccccgctcgggcgagcaggtgccgctgctgctgaagatgaagcgcagcaaactggcg
ctgggcaaagccatcgagagcggagacaccgacctggtgtacacagtggtgctgcacctc
aagaacgagctgaaccgcggctctttcttcatgaccctgcagaaccagcccgtggcactg
agcctgtaccgccagttctgccggcaccaggagcgggagacgctgaaggatctgtacaac
caggacgacaaccaccaggagctgggcaacctgcacgtgcagggtggctactgccagcag
cggatcgagggccgtgtggcctccctgcagaacgccctggatgaattctacaaggccaag
aacgacttcgctgccaaggccacggaggagcagatcaagctgctgcggctgcagcggcag
ctgcaggaggagctggacaagccctacctggacctgtccctgcacgacaccgtggccacc
ctcatcctggacgggcaccacaaacgtgctgagcagctctacagggacttcaagatcccg
gacaagaggtactggtggctgaagatcaacgccctggccacgcgcggggactgggaggag
atggagaagttctccaagagcaagaagtcacccattggctacctgcccttcgtggaggtg
gcagtgaagcaccacaaccgctacgaggccaagaagtacgcgccacgtgtgccccccgag
cagcgcgtcagggccttcgtcctcgtgggggacctggagcaggcggccgaggcggccatg
gagcgcaagaacgaggccgagatgagcctggtgctggcgcggtgctcggccggcaccgac
ggcgccctggccgaaaagctcaaccgggcacgggcacagctcctcaaaaagtga
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