Oenanthe melanoleuca (Eastern black-eared wheatear): 130252125
Help
Entry
130252125 CDS
T09236
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130252125 (SOX1)
Transcription factors [BR:
oma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130252125 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130252125
NCBI-ProteinID:
XP_056345351
LinkDB
All DBs
Position
1:complement(87397431..87398667)
Genome browser
AA seq
372 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGQTGAGGGGGGGGGGGNKANQDRVKRPMNAFMVWSRG
QRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR
KTKTLLKKDKYSLAGGLLSAGSAGGGPAGVGVGMGVGVSPGGVGQRLESPGGTASGGYAH
MNGWANGAYPGSVAAAAAAAAMMQEAQLAYSQHPGSGGHPHHPHPHHPHHPHNPQPMHRY
DMGALQYSPISNSQGYMSASPSGYGALPYGSQPHQNSAAAAAAAAAAAAASSGALGALGS
LVKSEPSVSPPVTSHSRAPCPGDLREMISMYLPAGEGGDPAAAAAQSRLHSLPQHYQSAS
TGVNGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagacggacttgcactcccctggcggagcccaggcccccacg
aacctttcggggcagaccggagcgggaggcggcggaggcggcggcggcggcgggggaaac
aaagcgaaccaggaccgggtcaagagacccatgaacgccttcatggtgtggtcgcggggc
cagcggcggaagatggcccaggagaaccccaaaatgcacaactcggagatcagcaagcgc
ctgggggccgagtggaaagtcatgtcggaggccgagaagagaccgttcatcgacgaggcg
aagcggctgcgggcgctgcacatgaaggagcacccggattataaataccggccgcggcgg
aagaccaagaccctgctcaagaaggacaagtactcgctggccggggggctgctgagcgcc
ggctctgccgggggaggcccggccggcgtcggcgtgggcatgggcgtcggcgtcagcccg
ggcggcgtcgggcagcggctggagagccccggcggcacggccagcggcggctacgcgcac
atgaacggctgggccaacggcgcctacccgggctcggtggcggcggcggcggcggcggcg
gcgatgatgcaggaggcgcagctcgcctacagccagcacccgggcagcggggggcacccg
caccacccgcacccgcatcacccgcaccacccgcacaacccgcagcccatgcaccgctac
gacatgggcgccctgcagtacagccccatctccaactcgcagggctacatgagcgcctcg
ccctcgggctacggcgccctgccctacggctcccagccccaccagaactcggcggcggcg
gcggcggcggcggcagcggcggcggccgcctcctcgggtgcgctgggcgccctgggctcg
ctggtgaagtcggagcccagcgtgagcccgcccgtcacctcgcactcgcgggccccgtgc
cccggggacctgcgggagatgatcagcatgtacttaccggccggggaaggcggggatccg
gcggccgctgccgcccagagccggctccactccctgccccagcactaccagagcgccagc
acgggggtgaacggcaccgtgcccttgacgcatatctga
DBGET
integrated database retrieval system
