Oenanthe melanoleuca (Eastern black-eared wheatear): 130252126
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Entry
130252126 CDS
T09236
Symbol
NFKB1
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04010
MAPK signaling pathway
oma04210
Apoptosis
oma04218
Cellular senescence
oma04620
Toll-like receptor signaling pathway
oma04621
NOD-like receptor signaling pathway
oma04622
RIG-I-like receptor signaling pathway
oma04623
Cytosolic DNA-sensing pathway
oma04625
C-type lectin receptor signaling pathway
oma04920
Adipocytokine signaling pathway
oma05132
Salmonella infection
oma05164
Influenza A
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130252126 (NFKB1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130252126 (NFKB1)
04218 Cellular senescence
130252126 (NFKB1)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
130252126 (NFKB1)
04621 NOD-like receptor signaling pathway
130252126 (NFKB1)
04622 RIG-I-like receptor signaling pathway
130252126 (NFKB1)
04623 Cytosolic DNA-sensing pathway
130252126 (NFKB1)
04625 C-type lectin receptor signaling pathway
130252126 (NFKB1)
09152 Endocrine system
04920 Adipocytokine signaling pathway
130252126 (NFKB1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130252126 (NFKB1)
05168 Herpes simplex virus 1 infection
130252126 (NFKB1)
09171 Infectious disease: bacterial
05132 Salmonella infection
130252126 (NFKB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130252126 (NFKB1)
Transcription factors [BR:
oma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
130252126 (NFKB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_4
Ank_3
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
130252126
NCBI-ProteinID:
XP_056345347
LinkDB
All DBs
Position
4:21803735..21860646
Genome browser
AA seq
982 aa
AA seq
DB search
MAAEDSYIMGVSDPQMFAVDQFMGMSALFNSTNYITSEIPLRTDGPYLQIIEQPKQRGFR
FRYVCEGPSHGGLPGASSEKNKKSYPQVKICNYVGPAKVIVQLVTNGKYVHLHAHSLVGK
FCEDGVCTVTAGPKDMVVGFANLGILHVTKKKVFETLETRMIDACKKGYNPGLLVHPELS
YLQAEGCGDRQLTEREREIIRQAAIQQTKEMDLSVVRLMFTAFLPDSNGSFTRKLDPVIS
DAIYDSKAPNASNLKIVRMDRTAGCVTGGEEIYLLCDKVQKDDIQIRFYEEDENGGMWEG
FGDFSPTDVHRQFAIVFKTPKYRDVNITKPASVFVQLRRKSDLETSEPKPFLYYPEIKDK
EEVQRKRQKLMPNFSDGYGGGSGTGGGGMYGGAGGSAGSGFSFPSYGYSTFGGMHFHPGT
TKSNAGMKHEDLSNCMAEQDRKSCDKQSDEWDMKCDVKVETVERTECRTAAVNEKKEDSG
FSCKTEVSKADCRWQDALFLEKAMQLARRHCNALFDYAVTGDVKMLLAAQCHLTAVQDDN
GDNVLHLAIIHLHTELVKNLLEVMPDLNYNDIINMRNDLYQTPLHLAVITKQAKVVEELL
KAGADVSLLDRHGNSVLHLAATEGDDKILSLLLRHEKVSPMINLPNGEGLSAIHMVVMAN
SMSCLKHLIAAGVNINAQEQKSGRTALHLAVEQENIPLAGCLLLEGDADVDSTTYDGTTP
LHIAAGRGSTKLAAVLKAAGANPHIENFEPLFDLDDVKDDEDDDEGIVPGTTPLDMAANS
EVYDILNGKPYESAEVLEDLLTQGHLRELNENSKMQLYKLLELPDPTKNWSTLAQKLGLG
ILNNAFRLSPSPSKTLLDNYEVSGGTVQELITALRQMDHTEAIEIIQEALSMSRRPSPLE
EDSTAKALPSSSPLTFARETGELDNSRFQDTESTCDSGVETSFRKLSFTYSDSLNSKSSL
TLSKMALGYGHESSGQSNYIAD
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagaagattcctatatcatgggagtatctgatccccaaatgtttgcggtggat
cagttcatgggaatgagtgctttatttaacagtacaaattacatcacttcagaaatacca
ctacgaacagatggaccatatcttcagatcatagaacagccaaaacagaggggatttcgt
ttccgatacgtatgtgaagggccttctcacggtgggctgcctggtgcttctagtgaaaag
aacaagaaatcataccctcaggtcaaaatctgcaattatgttggacctgcaaaagtaatt
gtccagttagttactaatgggaaatatgtccacttacacgctcacagcttggtgggtaaa
ttctgcgaggacggagtgtgcacggttaccgcaggacccaaggacatggttgtagggttt
gcaaatcttggaatacttcatgtcacgaagaagaaagtgtttgaaactctggaaacgcgc
atgatagatgcttgcaagaagggatacaacccaggactcctggtgcatccggaactcagc
tatctgcaggcagaaggatgcggagacaggcagctgactgaacgggagagggaaatcatc
cgccaggcagccatccagcagaccaaggagatggatctcagcgtggtgcggctcatgttc
acagccttcctccccgacagcaacggcagcttcacacgcaaactggatcccgttatctcc
gatgcaatatatgacagcaaagctcccaatgcctccaacctaaaaattgtaagaatggac
agaacagcagggtgtgtgacaggaggggaagagatttacctgctctgtgacaaggttcag
aaagatgatattcaaatacgtttctatgaagaggatgagaatggtggtatgtgggaaggc
tttggagatttttctcctacagatgtacatagacagtttgctattgtgttcaaaacaccc
aagtaccgagatgtcaatatcacaaagccagcatctgtatttgtacagctgcgtaggaaa
tctgatctagaaacaagcgaaccaaagccttttctctactatccggaaatcaaagataaa
gaagaagtgcagaggaaacgacagaagctcatgccgaacttctccgacggctacggggga
ggcagtggcaccgggggtggtggcatgtatggaggggcaggtggcagtgctggctctgga
ttcagttttccttcatatggatactctacttttggagggatgcatttccatcctggcaca
acaaagtccaatgctggcatgaaacatgaagatctatcaaattgcatggctgaacaagac
agaaagagctgtgataaacaaagtgacgaatgggacatgaaatgtgatgtgaaggtggaa
actgtggagaggactgaatgcagaacagctgctgttaatgagaaaaaggaggattctggt
ttttcctgcaagactgaagtaagcaaagcagattgcaggtggcaggatgctctgttcctg
gagaaggccatgcagcttgccaggcgccactgcaacgctctctttgattacgccgtaacc
ggagatgtgaagatgctgctggcagctcagtgccatctcaccgctgtccaggatgataat
ggggacaatgtccttcatttagcaattatccaccttcatactgagctggtgaaaaacctc
ttggaagtgatgcccgatttgaattacaatgacatcattaacatgagaaatgacctctat
cagacccccctgcacctggcagtaatcacaaagcaggcaaaggtggtggaagagctgctg
aaggctggagcagatgtcagcctcctggatcgccacggcaattctgtcttacatttagct
gctactgaaggagatgacaagattttgagtctactcctcaggcatgagaaggtatctcca
atgatcaacctccccaatggtgaaggtctcagtgcaattcacatggtggtaatggcaaat
agcatgtcctgcctcaaacatctgattgctgccggagttaacatcaatgctcaggaacaa
aaatctggacgaactgcattgcatttggctgttgaacaagagaatatccccttggcaggc
tgccttttgcttgagggtgatgcagatgtggacagcactacatatgatgggacaactccg
cttcacatagcagctggaaggggctcaacaaaattggcagcagttctcaaagcagcaggt
gcaaatcctcacattgagaactttgagccattgtttgatctagatgatgtgaaagatgat
gaagatgatgatgaagggattgtgcctggaacaacaccactggatatggcggccaacagt
gaggtgtatgacatattaaatggcaaaccctatgagtcagcagaggttttggaggactta
ctcacacaaggacatttgagagagttgaatgagaattccaagatgcagctttacaaacta
ttggaattgcctgatccaaccaaaaactggtccaccctagcacaaaaactgggtcttggc
atacttaataatgctttcaggttgagcccttccccatcgaagactctgctggataactat
gaggtttctggtggtacagttcaagagctgatcacagctttgagacagatggatcacaca
gaagccatcgaaataattcaggaagcactatccatgtcacgcagaccatctcccctggag
gaggacagtacagcaaaagctcttccatcatcatcaccactcacctttgcaagagagaca
ggtgagctggataatagcagattccaagacacggaaagtacctgtgacagtggtgtggag
acctccttccgcaagctgagtttcacttactcagactctctgaacagcaagtcctcacta
acactcagcaaaatggccctgggctatggacatgaaagttcagggcaaagcaattacata
gctgactag
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