Oenanthe melanoleuca (Eastern black-eared wheatear): 130252141
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Entry
130252141 CDS
T09236
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130252141 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130252141 (DHX15)
03009 Ribosome biogenesis [BR:
oma03009
]
130252141 (DHX15)
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130252141 (DHX15)
Spliceosome [BR:
oma03041
]
Complex A
U2 snRNP components
U2 related factors
130252141 (DHX15)
Complex B
130252141 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130252141 (DHX15)
Ribosome biogenesis [BR:
oma03009
]
Eukaryotic type
90S particles
Helicases
130252141 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Flavi_DEAD
AAA_25
Atrophin-1
AAA_29
Motif
Other DBs
NCBI-GeneID:
130252141
NCBI-ProteinID:
XP_056345371
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All DBs
Position
4:52323196..52369510
Genome browser
AA seq
765 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRTTDGKDRDRDRDRDDRSKDRDRDRDRDRDRDRERDKEKDLR
PTSNSTYYAAAGLPAIKPAMIPHSINPFTNLPHTPRYYDILKKRLQLPVWEYKERFTDIL
VRHQSFVLVGETGSGKTTQIPQWCVDYMRSLPGPKRGVACTQPRRVAAMSVAQRVADEMD
VMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATD
ILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERD
YLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYS
TLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPR
IRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSV
VLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQ
LAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNV
YHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIR
KALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTC
TDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgccaccgcctcgatctgggtgacgattacagctccagcaagaaacgcacc
accgacgggaaagatcgggaccgggacagggaccgagatgaccgttcgaaagatcgtgac
agggatcgtgacagagatagagatcgtgacagagaaagggacaaggagaaagatctgcga
cctacgtctaactccacatattatgcggctgctgggttaccagctatcaaaccagcaatg
attccacacagtattaaccctttcacaaatctaccacataccccacgatattatgatatc
ctgaaaaaaaggctgcagcttcctgtctgggaatataaagaaagatttacagatatattg
gttagacatcagtcatttgtgctggttggagagactgggtctggtaaaacaacacagatc
cctcagtggtgtgttgactacatgcgctcgctgcctggcccgaagaggggagtggcgtgt
acccagccacggcgagtggctgccatgagcgtggcgcagcgcgtggccgatgagatggat
gtcatgctgggccaggaggtcggctactccattcgctttgaagactgcagcagcgcaaaa
accattctgaagtatatgactgatggtatgttacttcgtgaagcaatgaatgatcctttg
ctggagcgctacggtgttataattcttgacgaggcccatgagagaacactggctacggat
atcttgatgggagttttgaaggaagttgtaagacagaggtctgatttgaaggttatagtt
atgagtgctactttagatgctggcaagtttcagatctattttgataactgtcctcttcta
actatcccgggtcgcacccatcctgtggagatattctatactccagaacccgaaagggac
tatcttgaggctgccattcgaacagtgatacaaattcacatgtgtgaagaagaagaagga
gatctcttactctttcttactggacaagaggagattgatgaagcctgcaagaggataaaa
cgtgaaattgatgacttaggtcctgaagttggtgacataaaaatcattccattgtattcc
acccttcctccacagcaacagcaaaggatatttgaacctcccccaccaaaaaaacaaaat
ggagcaataggaagaaaggttgtggtgtccactaacattgctgagacatcattgacaata
gatggtgtagtgtttgtgattgatcctggctttgcaaaacagaaggtgtacaatcctcgt
atcagagtggagtctctgttggtgactgcgatcagtaaagcgtctgcccagcagcgagct
ggccgtgctggtcgtactcggccaggcaagtgcttcaggctttatacagagaaagcctac
aaaactgaaatgcaggacaacacataccctgaaattttgagatctaacttaggatctgta
gtattacagctcaagaagcttggtatagatgatttggtgcactttgattttatggatcct
ccagctcctgaaactctgatgagagccttagagcttttgaattatctggctgctttaaat
gatgatggagacttgactgagttgggatcgatgatggctgaatttccattggatccacag
ctggctaaaatggttattgcaagctgtgactacaactgttctaatgaggtcctatctatt
actgccatgttgtcagtcccacagtgttttgttcgccccacggaagcaaagaaagcagca
gatgaagccaagatgaggtttgcccacatagatggagatcatttgacgttgctgaatgtc
taccatgctttcaagcaaaatcatgagtcggttcagtggtgttatgacaacttcattaac
tacaggtccctgatgtctgcagacaatgtacgccaacagctgtcacgaatcatggataga
tttaatttgcctcgtagaagcacagattttaccagccgagactattacatcaacataaga
aaggcattagttactgggtatttcatgcaggtggcacatttggagcgaacagggcattac
ttaacagtgaaagataaccaggtggtgcagttgcatccttccactgttcttgatcacaaa
ccagaatgggtgctgtataatgagtttgtccttacaacgaagaattacatccggacatgt
acagacatcaagccagaatggctggtgaaaattgcccctcaatattatgacatgagcaat
tttccacagtgcgaagcaaagagacagttggatcgcatcattgccaaacttcagtccaag
gaatactcacagtactga
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