Oenanthe melanoleuca (Eastern black-eared wheatear): 130252272
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Entry
130252272 CDS
T09236
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130252272 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130252272 (SMARCA5)
03036 Chromosome and associated proteins [BR:
oma03036
]
130252272 (SMARCA5)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
130252272 (SMARCA5)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
130252272 (SMARCA5)
RSF complex
130252272 (SMARCA5)
WICH complex
130252272 (SMARCA5)
B-WICH complex
130252272 (SMARCA5)
NORC complex
130252272 (SMARCA5)
BRF complex
130252272 (SMARCA5)
NuRF complex (fruit fly)
130252272 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
130252272
NCBI-ProteinID:
XP_056345649
LinkDB
All DBs
Position
4:10767723..10789791
Genome browser
AA seq
1039 aa
AA seq
DB search
MSAGQPPQPDEPPAPPLPPGANSGEAAGTGPPCAAGLAGGDIKMEESFDDASLAKQKEIQ
ETDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQN
LLSAGDYRHRRTEQEEDEELLTESSKTTNVCTRFEESPSYVKWGKLRDYQIRGLNWLISL
YENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLQNWMNEFKRWVPT
LRAVCLIGDKDQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRYLVIDEAHRIK
NEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSAEDFDSWFDTNNC
LGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDI
LNSAGKLDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLLPK
LKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHNERQASINAFNDPDSSKFV
FMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVE
ERIVERAEMKLRLDSIVIQQGKLVDQNLNKLGKDEMLQMIRHGATHVFASKDSEITDEDI
DHILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDYREKQKLAFTEWIEPP
KRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILYYRK
TIGYKVPRNPDLPNAAQAQKEEQLKIDEAEPLNDEELEEKEKLLTQGFTNWNKRDFNQFI
KANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEKIMAQIERGEARIQRR
ISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKENVYDELR
QCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKEKAEKKKRGPKPSSAQ
KRKMDGTPDGRGRKKKLKL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgggcagccgccgcagccggacgagccgcccgcgccgccgctgccaccgggc
gccaacagcggcgaggccgcggggacggggccgccctgcgccgccggcctggccgggggc
gacatcaagatggaggagtcttttgatgatgcatctctggcaaaacaaaaagaaatccag
gaaacagatcctacatatgaagagaaaatgcaaacagacagagcaaacagatttgagtat
ctgttgaagcagactgagctctttgctcatttcattcagcctgctgctcagaaaactcca
acttcacctttaaaaatgaaacctggacgtccacgaataaagaaggatgagaaacagaat
ttactgtcagctggcgactatcggcaccgtagaacagagcaggaagaggacgaggagctg
ttaacagaaagctccaagacaacaaatgtctgcactcggtttgaagaatctccatcgtat
gtgaaatggggaaagctgcgtgattaccagatccgaggtctgaactggctcatttctctg
tatgaaaatggcatcaatggcatcctggcagatgaaatgggtcttgggaagacactgcaa
acaatttctcttcttggctatatgaaacactacagaaacattcctggacctcacatggtg
ttagttcctaagtccactctgcagaactggatgaatgaattcaagagatgggtaccaaca
cttcgagcagtttgtttgattggtgacaaagaccagcgagctgcctttgtgagagatgtg
ttgttgcctggagaatgggatgtctgtgtaacatcatatgaaatgcttatcaaagagaag
tcagtattcaaaaagttcaactggagatatcttgttatagatgaggcccacaggattaaa
aatgaaaaatcaaagttatcagaaattgtgagagaattcaagactaccaaccggctgcta
ttaactggaactccacttcagaacaatttacatgaactctgggcacttctcaacttcctt
ttgccagatgtctttaactcagctgaggattttgattcatggtttgataccaacaactgt
ctaggggatcaaaaactggtggagcgccttcatatggtgctacgaccgttcctcctccgt
cgcatcaaggctgatgtggagaaaagcttgcctccaaagaaggaagttaaaatttatgtg
ggcctcagcaaaatgcagcgagaatggtatacccggattctgatgaaggatatagatatc
ctgaactcggctgggaagctggacaagatgagactgttgaacatcctgatgcagctgagg
aaatgctgcaatcacccttacctctttgatggagcagagcctggcccaccttacacaaca
gacatgcatttggtcaccaacagtggcaaaatggtagttctggacaaattgctgcctaag
ttgaaagaacaaggctcaagggttctaatcttcagtcagatgacaagagtcctagatatc
ttggaagattactgtatgtggaggaattatgaatattgcagactggatggacaaactcct
cacaatgaacgacaggcttccattaatgcattcaatgaccctgacagctcaaaatttgtg
ttcatgttgagcacacgagcaggaggtcttggaatcaatctggctactgctgatgttgta
attctctatgattcagactggaatccacaagtagaccttcaggctatggatcgagcgcac
aggatcggccagaccaagaccgtgcgggtgttcaggttcattacagacaacactgtggag
gagaggatagtggagcgcgcggaaatgaagctgcgcctggactccattgtcatccagcaa
ggcaaactggtggatcaaaacctgaataaacttggaaaggatgaaatgctgcaaatgatc
agacatggagcaacgcatgtgtttgcctcaaaggacagtgagattacagatgaagatatt
gatcacattttggaaagaggggcaaagaagactgcggaaatgaacgaaaaactttcaaag
atgggtgaaagctcccttaggaattttactatggatactgaatctagcgtgtataatttt
gaaggggaagactacagagaaaaacagaagttggcatttacagagtggattgaaccacct
aaaagagaaagaaaagccaattatgctgtggatgcctacttcagagaggctcttcgagtc
agtgaaccaaaagcacccaaggctccacggcctccaaaacagccaaatgtacaggacttc
cagttctttcctcctcgtctgtttgaactattggaaaaagagattctctactacaggaaa
acaattggttacaaggtacctcgtaatcctgatctcccaaatgcagcccaagcacaaaag
gaagagcagcttaagattgatgaggctgaaccacttaatgatgaagaactagaagaaaaa
gagaaacttctaactcagggcttcactaactggaataagagagatttcaaccagttcatc
aaagccaatgagaagtggggccgtgatgacattgaaaatatagcacgagaagttgaagga
aaaaccccagaggaagtcattgagtattcagctgtgttctgggaaagatgcaatgaactc
caagacatagagaagatcatggctcagattgaaagaggagaagccagaattcagagacga
atcagcataaaaaaggctcttgatacaaagattgggagatataaagcccctttccaccaa
ctaagaatatcctatggtactaataaagggaagaattacactgaagaggaggatcgcttc
ctaatctgtatgcttcacaaactaggatttgataaagaaaatgtctatgatgaattaaga
caatgtatccgaaactcgccgcaattcagatttgactggtttctcaagtccagaactgca
atggagctgcaaaggaggtgtaatactttaatcactctcattgaaagagaaaacatggaa
ctggaagaaaaggaaaaggcagaaaagaagaaacgtggaccaaaaccatcttcggcacag
aagcgcaaaatggacggcactcctgatgggcgtgggagaaaaaagaagctaaagctgtga
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integrated database retrieval system
