Oenanthe melanoleuca (Eastern black-eared wheatear): 130252493
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Entry
130252493 CDS
T09236
Symbol
CNOT6L
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130252493 (CNOT6L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130252493 (CNOT6L)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
130252493 (CNOT6L)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130252493 (CNOT6L)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130252493 (CNOT6L)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
130252493
NCBI-ProteinID:
XP_056346052
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All DBs
Position
4:complement(1528285..1548685)
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AA seq
549 aa
AA seq
DB search
MPKEKYDPPDPRRIYTIMSAEEVANGKKSHWAELEISGRVRSLSTSLWSLTHLTALHLND
NNLTRIPPDIAKLHNLVYLDLSSNKLRSLPAELGNMVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILSLYQDPDGTRKLLNYMLDNLAVHPEQLPPRPWITLKERDQILP
SASFTVMCYNVLCDKYATRQLYGYCPSWALNWEYRKKGIMEEIVNCDADIISLQEVETEQ
YFTLFLPALKERGYDGFFSPKSRAKIMSEQEKKHVDGCAIFFKTEKFTLVQKHTVEFNQV
AMANSEGSEAMLNRVMTKDNIGVAVVLEVHKELFGAGMKSLXVEKQLLIVANAHMHWDPE
YSDVKLIQTMMFVSELKNILEKASSRPSSPTADPNSIPLVLCADLNSLPDSGVVEYLSNG
IVADNHKDFKELRYNECLMNFSGNGKNGASEGRITHGFQLKSAYENNLMPYTNYTFDFKG
VIDYIFYSNTHMNVLGVLGPLDPQWLVDNNITGCPHPHIPSDHFSLLTQLELQPPLLPLL
NGVHLPSRR
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggaaaaatatgatcctccagatcctcgcagaatttacaccatcatgtcagcg
gaagaggtggccaacgggaagaagtcgcactgggctgaattagagatctcggggagagtg
cggagcctgagcacgtcgctgtggtcgctgacacacctgactgctctgcacctcaatgac
aacaaccttactcgcattccacctgatattgccaagcttcacaatctggtttacctggat
ctgtcatccaacaagctcagaagtttaccagcagaactaggaaacatggtgtctctcagg
gaattgcttttaaataacaatctgttacgggttttgccttatgaacttggacggctcttc
cagctgcaaaccctgggtttgaaaggcaatcctttatcccaagatattctcagcctctac
caggatccagacggaacccgaaagctactgaactacatgcttgacaatctagcagttcac
ccagagcagctgcctccaaggccatggattactttaaaagaacgagaccaaattctgccc
tcagcttcatttacagttatgtgttacaatgtgttgtgtgataaatacgccacccggcag
ctctatggctactgcccatcctgggcactcaattgggagtacaggaaaaagggaatcatg
gaagaaattgtcaactgtgatgcagatatcatcagtcttcaggaagtggaaacagagcaa
tacttcacccttttcctgccagccttgaaagaacggggatacgacggattcttctctcca
aagtcacgtgccaaaatcatgtccgagcaggagaaaaagcatgtggatggctgcgccata
ttcttcaaaacagaaaagttcacactggtgcagaagcacacggtggagttcaaccaggtg
gccatggccaactcggagggctcggaggccatgctgaaccgggtcatgaccaaggacaac
atcggagtggccgtggtgctggaggtgcacaaggagttatttggagcaggtatgaagtcg
cttnncgtggaaaagcagctgctcatcgtggccaatgcccacatgcactgggaccccgaa
tactcagatgtgaaactcatccagaccatgatgttcgtctcagagctgaaaaacatcctg
gagaaagcctcaagcaggcccagtagcccaacagcagatcccaactctatccctctggtg
ctgtgtgcggatctcaactcgctgcctgattcaggtgtagtggagtacctgagcaacggc
atagtggccgacaaccacaaggacttcaaggagctgcgctacaacgagtgtctgatgaac
ttcagcggcaacggcaagaacggagcgtccgagggccggatcacgcacggcttccagctc
aagagcgcctacgagaacaacctgatgccttacaccaattacacctttgacttcaagggc
gtgattgactacattttctactccaacactcacatgaacgtgctgggagtcctggggccc
ttggaccctcagtggctggtggacaacaacatcacgggctgcccgcacccgcacatcccc
tcggaccacttctcgctgctgacgcagctggagctgcagccgccgctgctgccgctgctc
aacggggtgcacctgccctcccgcaggtag
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