Oenanthe melanoleuca (Eastern black-eared wheatear): 130252641
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Entry
130252641 CDS
T09236
Symbol
SIGLEC1
Name
(RefSeq) sialoadhesin
KO
K06548
sialoadhesin
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130252641 (SIGLEC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oma04090
]
130252641 (SIGLEC1)
04091 Lectins [BR:
oma04091
]
130252641 (SIGLEC1)
CD molecules [BR:
oma04090
]
Proteins
130252641 (SIGLEC1)
Lectins [BR:
oma04091
]
I-type lectins (Siglecs)
130252641 (SIGLEC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_2
Ig_3
I-set
ig
V-set
Ig_4
Ig_5
Izumo-Ig
C2-set_2
C1-set
Ig_CD22
PKD
Motif
Other DBs
NCBI-GeneID:
130252641
NCBI-ProteinID:
XP_056346390
LinkDB
All DBs
Position
4:complement(68048448..68067956)
Genome browser
AA seq
1682 aa
AA seq
DB search
MRLPHCLVLLASLVPPALGSWGVSYPESLQASGGSCLVVPCTFSYPEDVTTADGIVAIWY
RDYDGQRTLVFHSATPQDVDPHFGGRAQLLGDPTARNCTLLLRGVTPGDSGPYRFRFEII
NGDRWSASRDVALSVSEDLERPSVTISEELTEGQRSTLECATPYVCPGGDIVLHWQGYDP
RVSEVSGRVQLDTSGVSRQVTLTSSFSWKDHGKKLLCQVSVGSKRASTEVALRVRHTPKD
TQVSLSPSSGNIGVGDNVTLSCQVGSSHPPISGYRWYRDGVAVGTERVLALRGVRREDHG
RYHCEAHNALGTGVSPPATLHVFSAEISASPAAEVREGTATTLSCDVPGREGHPEELSYT
WYKNSAWLKEGPAHTLLFPAVSAADAGYYSCQVTNSQGSDTAPAISLSVTYPPRIPTLTL
FQDTQGGRLVIVRCTVDSHPPATLTIDRHGAVLAASGAQVATPGQRLGVTASRNSLRLEM
RDAGPRDGGSYCCTASNVHGSASATKVLEIRAAGLLVQPSAEVAEGTAVTLTCVGTGDRA
EEPLYAWYRNGRRLREGSFPTLEFPSIRGDDAGTFQCQVRSRNGTDTSEAVPLRVFYPPK
PPVLSSFLQNRGGRLGIIQCSVESDPESNLTLQRGDTVIACTQGCPQAATSPRVQVTRSY
NSLKVEIRDVVVEDEGIYLCQAKNSRGTASSSVDFKADTANVTVSPSPRVLEGDNATLTC
HLSSGSAAVPNVTWYHNGQQIAEGSAPSLVLRPVASRDAGLYRCRASTAGGSRSSPDVLL
DVLYAPRDPLLTAFLEAERGSLAIFQCSVASNPPAQLALLRDQEPVATSAGGSSPRVTVS
AVPNSLRVEMREVTPADDGSYRCTATNAHGSAERRLQLRVQATRVLISPSSEVLEGDNVS
LTCQVAGEPPGDTVYSWYKDSKWLQEGPDSVLVLSRVTSAATGPYHCRARGSAGTSASPA
VTLSVWYPPRTPVLSTFLEPPWGQRGILECSVDSSPPARLALFKDGALVASSALSPPVPR
PRLNVTSATNALRVRVHPVLLQDEGQYRCVATNAHGNASTAGNFSGGAARVWIRPSPAVR
EGDNATLTCAVAGGDQDVLSYTWYRNQVWLGTGSSQNLTFPAVTASDAGSYQCSVQTPAW
NHSATPATLSVLYPPRNLRLQSFVESSRGAATILLCAVDSSPPARLTLLRGGHPLASSPP
GGGDTPRQSIRVSPSPNALRVELREASEEDEGEYECRARSALGVARASLTLRVQATRVLV
RPSAEVAEGTEVTLTCQAPHAQPGTLYTWLRNGRWVTEGPEPSLALRGRRSDAGLYSCRA
GRGPPAPPAALAVLYAPQQPSFVALLEPRGGRRAALLCSADGVPSPDIAVSRGQGHPPLA
TNRGGTSDPRFEVRATPTSLRVAMAELEPGDAGLYLCSATNSRGSVATSLRLEVPGVTLS
VEPSQEVPEGTEATMSCSATAWGDKGDNYTWYRDGRWLWEGPSASFVLSRVSSADRGSYQ
CRASGTWGTATSVPVSLSVLYAPREVSVSTFLENRSGRGAIVLCTAESHPPSRLALHHQG
HLLATSLSPAATPGLRAVPSHNALRLELLAAGTAAGGRYVCVATNALGNATGSADLDVHT
LSHLRTFRVLSWLLVATVAVAIVALLAMKVWPRIRKSQSWSRAEDTLELRSKPDLSQMDG
AS
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgccccactgcctggtgctcctggccagcctcgtcccgccagccctcggctcc
tggggggtctcctaccccgagtccctgcaggccagcggggggtcctgcctggttgtcccc
tgcaccttcagctaccccgaggatgtgacaacggccgacggcatcgtggccatctggtac
agggactacgacggccagcggacgctggtgttccactccgccaccccccaggatgtggat
ccccattttgggggtcgtgcccagctcctgggggaccccacggcccggaattgcaccctg
ctgctgcggggggtgacaccaggggacagtggcccctacaggttccgcttcgagatcatc
aacggcgaccgctggtcggcatcacgggacgtggcgctgagcgtttcggaggatctggag
cgtcccagtgtcaccatcagcgaggagctgaccgagggacagagatccaccttggagtgc
gccacgccctacgtctgtcccgggggtgacatcgtcctgcactggcagggctacgacccc
cgggtgtccgaggtgtccggccgtgtccagctggacaccagcggggtcagccgccaggtg
accctgaccagctccttctcctggaaggaccatggcaagaagctgctctgccaggtttcc
gtcggatccaagagggcgagcacggaggtggcgctgcgggtcaggcacacccccaaggac
acccaggtgtcgctgagcccttcctcggggaacatcggcgtgggtgacaacgtcaccctg
agctgccaggtgggcagcagccaccccccgatctcggggtaccgctggtacagggacggg
gtggccgtgggcaccgagcgggtgctggcgctgcggggcgtgcgccgggaggaccacggg
cggtaccactgcgaggcccacaacgccctcggcaccggggtgtcacctcctgccaccctc
cacgtgttctccgcggagatctcggccagccccgcggccgaggtgcgcgaggggacggcc
accaccctgtcctgcgatgtccccgggcgggagggacaccccgaggagctgagctacacc
tggtacaagaacagcgcctggctcaaggagggcccggcccacaccctcctgttccccgcc
gtgagcgccgccgacgccggctactactcctgccaggtgaccaacagccagggcagtgac
acggccccggccatcagcctcagcgtgacatatccaccccgaattcccaccctcacgctc
ttccaggacacccagggtggccggctggtcattgtccgctgcaccgtggacagccaccct
ccggccaccctgaccatcgaccgccacggcgccgtgctggccgccagcggggctcaggtg
gccaccccgggccagcggctcggtgtcaccgcctcccgcaattccctgcggctggaaatg
cgggatgcaggaccccgggatggcgggagctactgctgcaccgccagcaacgtccacggc
agcgccagcgccaccaaggtcctcgagatccgcgctgcggggctcctggtccagccctcg
gcggaggtggcagaggggacagcggtcaccctgacctgcgtggggacaggggacagggcg
gaggagccgctctacgcctggtacaggaacggccggaggctccgggagggctcattccca
accctggaattcccgtccatccgcggcgacgacgccggaaccttccagtgccaggtccgg
agcaggaacggcactgacacgtcggaggctgtcccgctccgagtgttctatcccccaaag
ccgccggtgctgagctcgttcctgcagaaccggggtgggcgcctgggcatcatccagtgc
tccgtggagagcgatcccgagtccaacctcaccctccagagaggggacactgtcattgcc
tgcacccagggatgtccccaagccgccaccagccccagggtccaggtcaccaggtcctac
aacagcctgaaggtggaaatccgggatgtggtggtggaggatgaggggatctacctgtgc
caggctaagaattcccgaggaactgccagctccagcgtggatttcaaggctgacactgcc
aatgtcaccgtgtccccatccccccgcgtgctggagggtgacaatgccaccctcacctgc
cacctgagcagcggctccgcggctgtccccaacgtcacctggtaccacaacgggcagcag
atcgccgagggctcggccccctcgctggtgctgcggccggtggccagcagggacgccggg
ctctaccggtgccgggccagcaccgcgggcggcagccggagctctcccgatgtcctcctg
gatgtgctgtacgcccctcgggaccctctcctgacggctttcctggaggccgagcgaggc
tccctggccatcttccagtgctccgtggccagcaaccccccagcccagctggccctgctc
cgggaccaggagccggtggccaccagcgcgggtggcagcagcccgcgggtcaccgtctcc
gctgtccccaactcgctgcgggtggagatgcgggaggtgacgccggcagacgacggcagc
taccggtgcacggccaccaacgcgcacggctcggcggagcggcggctgcagctgcgcgtg
caggccaccagggtcctgatctcaccgtcctcggaggtgctggaaggtgacaacgtctcc
ctgacgtgccaggtggccggagagccaccgggtgacaccgtctactcctggtacaaggac
agcaagtggctccaggagggtcctgacagtgtcctcgtgctgtcccgtgtcaccagcgct
gccaccgggccctaccactgccgggcccggggctccgcggggaccagcgcgtcccccgct
gtcaccctgagcgtctggtaccccccacggaccccagtgctcagcaccttcctggagcct
ccgtggggccagcgcgggatcctggagtgctccgtggacagctccccgccggcacggctg
gccctcttcaaggacggggccctggtggcctcctcggcgctgtcaccgcctgtcccccgg
ccacggctcaatgtcacctcggccaccaacgcgctgcgtgtccgtgtgcaccccgtgctg
ctgcaggacgagggacagtaccggtgcgtggccaccaacgcccacggcaacgccagcacg
gccgggaacttctctggaggcgccgcccgggtctggatccggccgtccccagccgtgcgg
gaaggggacaatgccaccctcacctgcgcggtggcaggaggggaccaggacgtgctgagc
tacacctggtaccggaaccaggtgtggctgggcaccggctcctcccaaaacctcaccttc
cctgcggtcaccgcctccgacgccggctcctaccagtgctccgtacagaccccggcctgg
aaccacagcgccacccctgccaccctcagcgtcctctacccccccaggaacctgcggctg
caatccttcgtggagagcagccggggcgcggccaccatcctgctgtgcgccgtggacagc
agccccccggcgcggctcaccctgctccgggggggacacccgctggcctccagccccccc
gggggaggtgacaccccccggcagagcatccgcgtgtccccctctcccaacgcgctgcgc
gtggaattgcgggaagcgtccgaggaggatgagggtgaatacgagtgccgggcgcgcagc
gccctcggtgtcgcccgcgcgtccctcacgctccgcgtgcaagccaccagggtgctggtg
cgaccctcggccgaggtggcggaggggacagaggtgacattgacgtgccaggccccccac
gcgcagccggggacactctacacgtggctcaggaacgggcggtgggtgacagagggaccc
gagccctcgctggcgctccgcggccgccgctccgacgcggggctctacagctgcagggcg
ggccggggtccccccgcgccccccgccgccctcgccgtgctctacgccccgcagcagccg
agcttcgtggcgctgctggagccgcgcggggggcggcgggcggcgctgctctgctcggcc
gacggtgtcccctcgccggacatcgccgtcagcaggggacagggccacccacccctggcc
accaaccgcggtggcacttccgacccccgcttcgaggtgcgggccacccccacgtcgctg
cgggtggcgatggcggagctggagcctggggacgcggggctctacctgtgctcggccacc
aacagccgcggctcggtggccacgtccctgcggctggaagtgccaggggtcacgctgagc
gtggagccatcgcaagaagtccccgagggcaccgaggccaccatgagctgctcggccacc
gcctggggggacaaaggtgacaactacacgtggtaccgcgacgggaggtggctctgggag
ggaccctccgcttccttcgtcctcagccgcgtgtccagcgccgaccgcggctcctaccag
tgccgggccagcgggacgtggggcacggccacctctgtccccgtcagcctcagcgtcctc
tacgctcctcgggaagtctcggtcagcaccttcctggagaaccgcagcgggcgcggggcc
atcgtgctgtgcacggccgagagccacccgccctcccggctggccctgcaccaccagggc
cacctgctggccaccagcctgtcccctgccgccaccccggggctccgggctgtcccctcg
cacaacgcgctgcgcctggagctgctggccgcggggacagcggctggcgggcgctacgtg
tgcgtggccaccaacgccctgggcaacgccacgggcagcgcggacttggatgtgcacact
ctgagccacctgaggaccttccgggtcctgtcctggctgctcgtggccaccgtggccgtg
gccatcgtggctctgctggccatgaaggtgtggcccaggatcaggaaatcccagagctgg
tcccgtgccgaggacaccctggagctgaggagcaaaccggacctgtcacagatggatgga
gcatcttga
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