Oenanthe melanoleuca (Eastern black-eared wheatear): 130252654
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Entry
130252654 CDS
T09236
Symbol
SMARCAD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130252654 (SMARCAD1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130252654 (SMARCAD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
130252654
NCBI-ProteinID:
XP_056346422
LinkDB
All DBs
Position
4:18924142..18966274
Genome browser
AA seq
1023 aa
AA seq
DB search
MSLYNLDRFRFERKGKGAEQEPPSPAAPAEAPGAAAAVGAAAGEEEEGTDDSNRPVTPAS
DGSERTEYSTIPETPEAQRTVKESYFKRQRGVQFLDVSDSEEEEPRNVGAAKEAWAPRRE
VAAISELSNDDDQSEEEMPQLGLVNGGEQQPAVKEDVEEDNRDSKLQIMKEHFPQRSDQE
LLKLVESACTMDEAVAAGLKLNYKAASGKRKLRDSPTNCKTKNERVAKKSRASYLDDSNP
KRQWERQEMLVKKLQATFPGLDKEELREVLEEHNWVFHDALEALKIFADDEEGVEFPPKR
KVADWTEASPESQSEESKAKTKQKASEEEQNGFQKKDKGKRSIWSAERETEYMEDESASE
DGGSSLDEDYGSGDEVMEDGYKAKILSFLQDASLSELTLIPQCSQKKAQKIIALRPFNSW
EALFTKMTKTSGLSEDIVWNCKILLKERDVVLKLMNKCEDISNKLTKQVTRITRDGGCGW
NIEQPSILNRSLKLKPYQKIGLNWLALLYKHGLNGILADEMGLGKTIQAIAFLAYLYQEG
NRGPHLIVVPASTLDNWIREVHLWCPELNVLFYYGSQEDRKHLRVDIHNKAVDFNVIVTT
YNSAISSSEDRGLFRKLKLHYAIFDEGHMLKNMSSIRYQHLMTINAKNRLLLTGTPVQNN
LLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKSAEEQSIYEKERIAHAKQIIKPFILRRV
KDEVLKQLPPKKDLVELCAMSDKQEQLYVDLLNKLKKTINSNEKNSDMGNAMMQLRKMAN
HPLLHRQYYTNDKLRTMSTLMLKEPTHRDANPDLIFEDMTVMTDFELNVLCKQYHHINDF
TLDMDQILDSGKFRALERILSDLKEKGDRVVLFSQFTMMLDILEVFLKHWQHRYIRLDGK
TQISERIHLIDEFNTDMGIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRC
HRVGQTREVQVIKLISKGTIEETMLKISQQKLKLEQDMTAAESGEEGTIPADIATLLKAS
LGL
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctacaatttggaccggttccgcttcgagaggaaggggaagggcgcggagcag
gagcccccgtccccggcggccccggcggaggcacctggcgctgctgccgcggtcggtgcc
gccgcaggggaggaggaggaaggtacggatgacagcaacaggccagtcaccccggcttcg
gacggctcagagagaactgagtattccaccatcccagaaactcctgaagctcagaggacg
gtgaaagagtcttatttcaagcgccagcgaggggtgcagttcctcgatgtgtctgacagc
gaggaggaggagcccagaaacgtcggtgctgccaaggaagcctgggctccgaggagagag
gtggccgcaatctctgaactgtctaatgatgatgaccagtctgaagaggaaatgccccag
ctggggcttgtaaatggtggggagcagcagccagctgtgaaggaggatgtagaggaagat
aacagagactcaaagttgcaaataatgaaggaacattttccccagagaagtgaccaagaa
ttattaaaactggtagaatcagcatgcacaatggatgaagcagtagctgctggtttgaag
ctcaattacaaagctgcctctggtaaaaggaaactaagagattctcccacaaattgcaaa
accaaaaatgagcgagttgcaaaaaagtcaagagctagttatctggatgactcaaacccc
aaaagacaatgggagaggcaagagatgcttgtgaagaagttgcaagctacattccctgga
ctggataaggaggagctgagagaggtacttgaggaacataactgggtgtttcatgatgca
ctggaggccctgaaaatatttgcagacgatgaggagggtgtggaatttcctcccaaaagg
aaagttgctgactggaccgaagcctcccctgagagccagagtgaggagagtaaagctaag
acaaaacagaaagcttctgaagaagagcagaatggctttcagaaaaaggacaaaggcaaa
aggagcatttggagtgctgaaagagaaacagaatacatggaggacgagtctgcttccgaa
gacggcggaagctccctggatgaggactacggcagcggtgacgaagtgatggaggatggc
tacaaagcaaaaatcctcagcttcctgcaggatgcttccctgagcgaactgactctgatt
ccccagtgttctcagaaaaaggctcagaaaataatagcactccggccctttaacagctgg
gaggctctgtttacaaaaatgacgaagacttctggtttgtcagaagatatagtctggaat
tgcaagatactgctgaaggagagggatgtggttctaaagctcatgaataaatgtgaagac
atttccaataaactgacaaaacaggtaaccaggattactagagatggaggatgtggatgg
aacatagagcaaccctccattctgaatcgcagtttgaaactgaagccatatcagaagatt
ggtttgaactggttagcactgctgtataagcatggattgaatggcatcttggctgatgaa
atgggcttaggaaaaacaattcaagctattgcatttctggcttatctctaccaagagggc
aatagaggtccccatttgatagttgtgccagcttcaacgttagataactggataagagaa
gttcacctatggtgtcctgaactgaatgtcctcttttactatggatcccaagaagatagg
aaacatctcagggtggacattcataataaagctgttgatttcaatgtgattgtgactaca
tacaactctgcaatcagcagctcagaagatcgaggactgttccgcaagctgaagcttcac
tatgcaatttttgatgaaggtcatatgctcaagaacatgagctctatccgctaccagcac
ctcatgacaattaatgccaagaatcgcttgctgctaacagggactccagttcaaaataat
ctgttggaattgatgtccctcttgaattttgtcatgcctcatatgttcagcagtagcaca
agtgaaattcgaaggatgttctcttcaaaaacaaagagtgctgaagaacaaagcatatat
gagaaggagagaattgcacatgccaagcagataataaaaccattcatcttgagaagagta
aaagatgaggtccttaaacagctacctcccaaaaaagatctcgttgaactgtgtgccatg
tctgataaacaggaacaactctatgtagatctcttaaacaaactcaagaaaactattaac
agtaatgagaaaaactctgatatgggaaatgcaatgatgcaacttaggaaaatggccaat
caccctcttctgcatcgtcagtactacacgaatgacaagctcaggaccatgtccactctc
atgctcaaagaacccacacatcgtgatgctaaccctgaccttatctttgaagacatgaca
gtgatgacagattttgagctgaatgtgctttgtaagcaatatcatcacatcaatgacttc
acattagacatggatcagattctggattctggaaagtttagagcactggaacgcattctc
tccgaccttaaagagaagggtgacagagttgtgttgtttagccagttcactatgatgctg
gacatcttggaagtttttctaaaacattggcaacatagatacattaggctggatggaaaa
acacagatttctgagcggatacatctgattgatgagttcaacacagatatgggtatattt
gtgttccttctgtctaccaaagctggtggcttgggcattaatctgacctcggccaatgtt
gttatccttcatgacattgactgcaacccttacaatgataagcaggcagaagaccggtgc
cacagagtaggtcagacacgggaagtacaggtcataaagctcatcagtaaggggactatt
gaagaaaccatgctcaaaatcagccaacagaaattgaagttagaacaagatatgactgca
gcagaatcaggagaagaaggaaccattccagcagatatagccacgttattaaaagcttca
ttgggtctctaa
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