Oenanthe melanoleuca (Eastern black-eared wheatear): 130252667
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Entry
130252667 CDS
T09236
Symbol
SLIT2
Name
(RefSeq) slit homolog 2 protein isoform X1
KO
K06839
slit 2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oma00536
]
130252667 (SLIT2)
Glycosaminoglycan binding proteins [BR:
oma00536
]
Heparan sulfate / Heparin
Axon guidance molecules
130252667 (SLIT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_1
Laminin_G_2
LRRNT
LRR_9
LRRCT
LRR_1
hEGF
EGF_TEN
LRR_14
EGF_DL_JAG
EGF_3
EGF_Teneurin
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
130252667
NCBI-ProteinID:
XP_056346441
LinkDB
All DBs
Position
4:complement(53576686..53823762)
Genome browser
AA seq
1520 aa
AA seq
DB search
MMCGWGKLPLSLGLLLAMAGAVAPQPCPAQCSCSGSTVDCHGLALRGVPRNIPRNTERLD
LNGNNITRITKTDFAGLRHLRVLQLMENKISTIERGAFQDLKELERLRLNRNNLQLLSEL
LFLGTPKLYRLDLSENQIQAIPRKAFRGAVDIKNLQLDYNQISCIEDGAFRALRDLEVLT
LNNNNITRLSVASFNHMPKLRTFRLHSNNLFCDCHLAWLSDWLRQRPRVGLYTQCAAPSH
LRGHNVAEVQKREFVCSGHQSFMAPSCSVLHCPAACTCSNNIVDCRGKGLTEIPTNLPET
ITEIRLEQNSIKVIPPGAFSPYKKLRRIDLSNNQISEAAPDAFQGLRSLNSLVLYGNKIT
ELPKGLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRA
IQTLHLAQNPFICDCHLKWLADYLHTNPIETSGARCTSPRRLANKRIGQIKSKKFRCSGT
EDYRSKLSGDCFADLACPEKCRCEGTTVDCSNQKLNKIPDHIPQYTAELRLNNNEFSVLE
ATGIFKKLPQLRKINLSNNKITDIEEGAFDGASGVNELLLTSNRLESVQHKMFKGLESLK
TLMLRSNRVSCVGNESFTGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN
CHLAWLGDWLRKKRIVTGNPRCQKPYFLKEIPIQDVAIQDFTCDDGNDDNSCSPLARCPA
ECTCLDTVVRCSNKGLKALPKGIPKDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRI
STLSNQSFSNMTQLLTLILSYNRLRCIPARTFDGLKSLRLLSLHGNDISVVPEGAFNDLS
ALSHLAIGANPLYCDCNMQWLSDWVKSEYKEPGIARCAGPGEMADKLLLTTPSKKFTCQG
PVDVNILAKCNPCLSNPCKNDGTCNNDPVDFYRCTCPYGFKGQDCDIPIHACISNPCHHG
GTCHLKEGEKDGFWCTCADGFEGENCEVNVDDCEDNDCENNSTCVDGINNYTCLCPPEYT
GELCEEKLDFCAQNLNPCQHDSKCILTPKGYKCDCTPGYVGDHCDIDFDDCQDNKCKNGA
QCTDAVNGYTCICPEGYSGLFCEFSPPMVLPRTSPCDNYECQNGAQCIIKESEPICQCLS
GYQGEKCEKLISINFVNKESYLQIPSAKIRPQTNITLQIATDEDSGILLYKGDKDHIAVE
LYRGRVRVSYDTGSYPASAIYSVETINDGNFHIVELLAMDQILSLSIDGGSPKIITNLSK
QSTLNFDSPLYVGGMPVKNNIAALRQSPGQNGTSFHGCIRNLYINSELQDFRNVPLQVGI
LPGCEPCHKKVCVHGTCHATSQSGFSCECEGGWTGPLCDQQTNDPCLGNKCVHGTCLPIN
AFSYSCKCLQGHGGVLCDEEEMLLNPCQSIRCKHGKCRLSGLGKPYCECGSGYTGDSCDK
EISCRGERVRDYYQKQQGYAACQTTKKVSRLECRGGCSSGQCCAPLRSKRRKYAFECTDG
SSFVDEVEKVVKCGCTDCPS
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgcggctgggggaagctccccctgtccctggggctgctgctggcgatggcgggc
gcggtggcgccgcagccgtgcccggcgcagtgctcctgctcggggagcaccgtggactgt
cacgggctggcgctgcgcggcgtcccgaggaacatcccccgcaacaccgagaggctggat
cttaatggaaataacatcacaagaatcacgaagaccgactttgctggtctaaggcacctt
cgagttcttcagctcatggagaacaagattagtactattgagagaggagcattccaggat
ttaaaagaactggagaggctgcgcctaaacagaaataacctccagttgctttctgagctg
ctctttctggggacgccgaagttgtacaggcttgatcttagtgaaaatcagattcaagca
ataccaaggaaggcattccgaggagcagtagacataaaaaatctgcagctggattacaac
cagatcagctgtattgaggatggggcgttcagggctctgcgtgacctggaagtgctcact
ctcaacaataacaacatcactcgactatccgtggcaagtttcaaccacatgcccaaactc
agaacattccgcctgcactccaacaacctgttctgcgactgccacctggcctggctgtcg
gactggctgcggcagcggccgcgcgtggggctctacacgcagtgcgccgcgccctcgcac
ctccgcggccacaacgtcgccgaggtccagaagcgcgagtttgtctgcagcggtcaccag
tcctttatggctccatcctgcagtgtcctgcactgccctgctgcatgcacctgtagtaac
aacattgtggactgtcgtgggaaaggccttactgagatcccaacaaaccttccagaaacc
attactgaaatacggttagaacaaaattcaatcaaggtcattcctcctggagctttctcc
ccctacaaaaagcttcgaagaattgacttgagcaataaccagatctctgaagcagctcca
gatgctttccagggcttacggtccctcaattcactagtcctctacggcaataaaatcaca
gaacttccaaagggcctatttgaaggactcttttctctgcaactgctattattgaatgcc
aacaagatcaattgtctgcgagttgatgcatttcaggatctgcacaacctgaatcttctt
tctctgtatgacaacaagcttcagaccattgcaaaaggcaccttctcacccctacgtgcc
attcagaccttgcatttggctcagaacccgtttatctgtgactgccatctgaagtggctg
gcggattatcttcacacaaaccccattgagaccagtggtgcccgttgcaccagcccccgc
cggctggcaaacaaaaggatcggccagatcaaaagcaagaaattccgctgctcaggcact
gaagattacagatccaaattaagtggagactgctttgcagatttggcttgccctgagaaa
tgtcgctgtgaagggaccacagtggactgctccaatcagaaactcaacaaaattcctgat
cacattccccagtacacagcagagttgcgactaaataacaacgaattttcagtcctggaa
gctactggaatctttaagaaacttcctcagctgcgtaaaataaacctgagcaataacaag
attacagatatagaagaaggagcatttgatggagcctctggtgtgaatgaactattgctc
acaagcaaccgtttggaaagtgttcaacacaaaatgttcaaaggactagaaagtctcaaa
acactgatgctgaggagcaacagggtgagctgtgtgggaaatgagagcttcacagggctg
agctctgtccgcctgctctcgctgtacgacaaccagatcaccacggtggcccccggcgcc
ttcgacacgctgcactcgctctccacgctaaacctcttggccaatcccttcaactgcaat
tgccaccttgcatggcttggagactggctgaggaagaaacgcattgtgacggggaaccct
cgctgccaaaaaccctacttcctcaaagagattcctatccaggatgtggcaattcaggat
tttacatgtgatgatggaaatgatgacaatagctgctctcccctggcccgctgccctgca
gaatgtacttgtctggacacagtagttcgctgcagcaacaaaggtctgaaagctttgcct
aaaggcatccctaaagatgtgactgaactttatttggatggaaatcagtttacccttgtt
ccaaaagagctttccaactacaagcatttgacactcatagatttaagtaacaacagaatc
agcactctttctaatcagagcttcagcaacatgactcagctgctcaccttaattcttagt
tacaaccgcctgagatgtattcctgcacggacttttgatgggttgaaatcacttaggttg
ctgtctttacatggcaatgatatttctgttgttcctgaaggagcctttaatgatctttca
gcattatcacacctggctattggagcaaatcctctttattgtgattgcaatatgcagtgg
ctgtctgactgggtaaaatcagaatacaaagaacctggtattgcacgttgtgctggtccc
ggggaaatggcagataaactgcttctcacaactccttctaagaaatttacttgccaaggg
cctgtggatgttaatattcttgcaaagtgtaatccctgtttatcaaatccatgtaaaaat
gatggaacctgcaataatgatccagttgatttctacagatgtacatgcccatatggtttc
aagggtcaagactgtgatattcccattcatgcctgcattagtaacccgtgccaccatggt
ggaacttgccatttgaaggaaggagaaaaagatggtttctggtgcacttgtgcagatgga
tttgaaggtgaaaactgtgaagtaaatgttgatgactgtgaagacaatgactgtgaaaac
aactctacttgtgtggatggaattaataactatacttgcctttgtccacctgaatataca
ggtgaactctgtgaggagaaattagatttctgtgcccaaaacctgaatccttgccagcat
gattcaaagtgcatcttgacacccaaaggatacaaatgtgattgcacacctggatatgta
ggtgaccattgtgatattgactttgatgactgccaggacaacaaatgcaaaaacggagcg
cagtgcaccgacgcagttaatgggtatacgtgcatttgcccagaagggtacagtggcttg
ttttgtgagttttcaccgcctatggttctacctcgcaccagcccttgtgataactatgaa
tgtcaaaatggggcccagtgtatcataaaagaaagtgaaccaatctgtcagtgtttgtca
ggctaccagggtgagaaatgtgaaaagctgattagtataaacttcgtcaacaaagaatcc
tatctgcaaatcccttcagctaagatacgcccccaaaccaacatcactctacagattgcc
acagatgaagacagtgggatcctgctgtacaaaggcgataaagatcatatagcagtggaa
ctgtaccggggtagagtgagggtcagctatgacacaggatcatatccagcctctgctatt
tacagtgtggaaacaattaatgatggcaatttccacattgtggagctgctggctatggat
cagattctgtctttatctattgatggaggaagccccaagataattaccaatttgtccaag
caatccactctgaattttgattctccgctgtatgtaggaggcatgcctgtgaaaaataac
atagcagctttacgccagtcgccagggcagaacggcactagcttccatggctgcatccgt
aacctctacatcaacagtgagctccaggacttcagaaacgtgccactgcaagtgggaatt
ctgccaggttgtgagccttgccacaagaaagtttgtgtgcatggcacatgccatgctacc
agccagtcaggcttctcctgcgagtgcgaaggagggtggaccggaccgctctgtgatcag
caaaccaacgacccgtgccttggaaacaaatgtgtgcatggtacctgcttgccgatcaat
gcattttcatacagttgtaaatgcctgcagggacatgggggagtcctctgtgatgaagag
gaaatgctgcttaacccctgccagtccatcaggtgtaaacatggcaaatgcaggctttca
ggacttgggaaaccatattgcgaatgcggcagcggatacacgggcgacagttgtgataaa
gaaatctcttgtcgaggggaacgagtccgagattactaccaaaagcagcaagggtacgct
gcgtgccagacgaccaagaaggtttcgagactagagtgtagaggcgggtgctcgtccggg
cagtgctgcgcgccgctgcgcagcaagaggcggaaatacgccttcgagtgcacggacggc
tcctccttcgtggacgaggtggaaaaagtggtgaagtgtggctgtacagattgtccctcc
taa
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