Oenanthe melanoleuca (Eastern black-eared wheatear): 130253194
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Entry
130253194 CDS
T09236
Symbol
PCDH19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oma04515
]
130253194 (PCDH19)
Cell adhesion molecules [BR:
oma04515
]
Cadherins
Protocadherins
130253194 (PCDH19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PepSY
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
130253194
NCBI-ProteinID:
XP_056347514
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Position
4A:complement(18929983..18985114)
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AA seq
1094 aa
AA seq
DB search
MGALPALLGAALLWAGAGALVNLKYSVEEEQRAGTVIANVAKDARDAGFVLDPRQPAAFR
VVSNSAPHLVDISPGSGLLVTKQKIDRDLLCRQSPKCVISLEVMSSSMEICVIKLEIKDL
NDNAPSFPTDQIELEISETASPGTRVPLESAYDPDSGSFGVQSYEITPNDLFGLETKTRG
DGSRFAELVVEKSLDRETQSHYSYVITALDGGDPPNFGTVELSIRVIDSNDNNPLFEEPA
YTVSVPENAPPGTPVIRLNASDPDEGTNGQVLYSFHSYVSERARELFQIDPQSGLITVSG
AIDYEEGHVYELDVQAKDLGPNSIPAHCKVTISVQDANDNPPLINLLSVNSELVEVSENA
PLGYVIALVRVSDRDSGANGRVQCKLLGNVPFRLQEYESFSTILVDGRLDREQRDQYNLT
IQARDNGIPSLQATKSFTVKITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDPDL
GLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGSPS
LQSNATVRVIVLDVNDNTPVITAPPLVNGTAEVYIPRNAGVGYLVTVVKADDYDEGENGR
LSYEMVEGDRGFFEIDQVNGEIRTTRAFGENAKTAYELIVVAHDHGKTSLSASALILIYL
SPALDAQESIGSVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCRIAEYSY
GHQKKSSKKKKISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSE
STFLNVESQNSRNAGSKHIYQHSFTGQSPPQPDLIINGMPLPETENYSFDSNYVNSRAHL
IKSSSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGLYCDTAVNDALNTSVPSVGSQGPEQ
EQSEGFHCREECRILGHSDRCWMPRGAAPSRAKSPERGRNVIALSIEASAADAEPYADCG
TKRTFATFGKEGGEPAAEERPANAKAKRTVDSAACSPKVSGAVREAGNGCEAVSPVTSPL
HLKSPLAKPAVPYGAGHCREREPFGTGGPSRPSEAEPRGADSEGGGHEGNPLLQERRERD
KDSPGARRLKDIVL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctctcccggcgctgctcggggccgccttgctttgggccggcgccggggccctc
gtcaatctcaagtactcggtggaggaggagcagcgggccggcacggtgatcgccaacgtc
gccaaggacgcccgggacgccgggttcgtcctggacccccggcagcccgccgcattccga
gtggtctccaactcggctccccacctggtggacatcagccccgggtccgggctgctggtg
accaagcagaagatcgacagggacctactgtgccggcagagccccaagtgtgtcatctcg
ctggaggtgatgtccagctccatggagatctgcgtgatcaagctggagatcaaggacctg
aacgacaacgcgcccagcttccccacggaccagatcgagctggagatctcggagacggcc
agccccggcacccgggtgcccctggagagtgcctatgacccggactcgggcagctttggt
gtgcagagctatgagatcacccccaatgacctctttgggctggagaccaagacacggggt
gacgggtcccgttttgctgagctggtggtggagaagagcctggaccgtgagacgcagtcc
cactacagctacgtgatcacggcgctggacggcggcgacccgcccaacttcggcacggtg
gagctcagcatccgcgtcatcgactccaacgacaacaacccgctctttgaggagccagcc
tacaccgtcagcgtgcctgagaacgcccctccgggcacgccggtcatccgcctcaacgcc
tctgacccggacgagggcaccaacggccaggtcctctactccttccacagctacgtctcc
gagcgggcccgggagctgttccagatcgacccccagagcggcctcatcaccgtcagcgga
gccatcgactacgaggagggccacgtctacgagctggacgtgcaggccaaggacttgggg
cctaactccatccctgcccattgcaaagtgaccatcagcgtccaggacgccaatgacaac
ccgcccctcatcaacctgctctctgtcaacagcgagctggtggaggtgagcgagaacgcc
ccgctgggctatgtcatcgccctggtgcgcgtctcggaccgcgactccggcgccaacggg
cgcgtgcagtgcaagctcctgggcaacgtgccgttccgcctgcaggagtacgagagcttc
tccaccatcctggtggacgggcggctggaccgcgagcagagggaccagtacaacctcacc
atccaggccagggataacggcatcccttcgctgcaggccaccaagtccttcaccgtcaag
atcaccgacgagaacgacaaccatccccacttctccaagccctactaccaggtcattgtg
caggagaacaacaccccaggggcctacctgctctcggtgtcggccagagaccctgacctg
ggcctcaatggcagcgtgtcctaccagatcgtgccctcccaagtcagggacatgcctgtg
ttcacctatgtctccatcaaccccaactctggagatatctatgctttgaggtccttcaat
cacgaacagaccaaggcctttgagttcaaggtcttggcaaaagatgggggtagtccctct
ctgcagagcaatgccactgtcagggtgattgtcctggatgtcaacgacaacacgccggtg
atcacggccccgcccctggtcaacgggacggcggaggtgtacatccccaggaacgcgggc
gttggctacctggtgaccgtggtcaaggcagatgactatgatgagggtgaaaatggcaga
ctttcctatgaaatggtggaaggagacagagggttttttgagatcgaccaggtcaatgga
gagataaggaccaccagagcctttggggagaatgccaaaacagcctatgagctcattgtg
gtggctcatgaccatgggaaaacgtctctctcggcttctgccttgattttgatttacctg
tctccagccctggatgcccaggagtccataggatctgttaacctctccttgattttcatt
attgccctggggtctattgcagccattctttttgtcaccatgatctttgtggcagtcaag
tgcaaaagggataacaaggaaatcaggacctacaactgcaggattgctgagtactcctac
gggcaccagaagaaatccagcaagaagaagaagatcagcaagaacgacatccgcctggtg
ccgcgggacgtggaggagacggacaaaatgaacgttgtgagctgctcctccctcacctcc
tccctcaactacttcgactaccaccagcaaacactgcccctgggctgccggcgctccgag
agcaccttcctcaacgtggagagccagaacagccgcaacgccggctccaagcacatctac
cagcacagcttcacgggccagagccccccgcagcccgacctcatcatcaacggcatgccg
ctgcccgagactgaaaactactcctttgattccaactacgtgaacagcagagctcattta
ataaaaagcagctccacgttcaaggacttggaggggaacagcctgaaggacagtggccac
gaggagagtgaccagacggacagcgagcacgacgtgcagcgggggctgtactgcgacacg
gccgtcaacgacgcgctcaacaccagcgtcccctccgtgggctcccagggccccgagcaa
gagcagagcgagggtttccactgccgggaggagtgccgcatcctgggccactcggaccgc
tgctggatgccgcgcggcgccgcgcccagccgcgccaagtcccccgagcgcggccgcaac
gtcatcgccctgtccatcgaggcctcggcggcggacgcggagccttacgcagactgcggc
acaaaaaggaccttcgccaccttcggcaaggagggcggcgagcccgcggccgaggagcgg
cccgccaacgccaaggccaaacgaacggtggactcggccgcctgcagccccaaggtgagc
ggcgccgtgcgcgaggccggcaacggctgcgaggccgtcagccccgtcacctcgcccctg
cacctcaagagccccttggccaagccggccgtgccctacggcgccgggcactgccgggag
cgggagcccttcgggaccggcggcccctcgcggcccagcgaggccgagccccgcggcgcg
gacagcgagggcggcggccacgagggcaacccgctgctgcaggagcgccgggagcgggac
aaggactcgcccggcgcccggagactgaaggacatcgtcctctga
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