Oenanthe melanoleuca (Eastern black-eared wheatear): 130253437
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Entry
130253437 CDS
T09236
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oma01002
]
130253437
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130253437
Enzymes [BR:
oma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130253437
Peptidases and inhibitors [BR:
oma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130253437
Ubiquitin system [BR:
oma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130253437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
DUF6710
Vps23_core
Motif
Other DBs
NCBI-GeneID:
130253437
NCBI-ProteinID:
XP_056347990
LinkDB
All DBs
Position
1:complement(104742189..104777224)
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AA seq
1301 aa
AA seq
DB search
MHVDSRKRSCLIYLGASWVLGVVLCTHFVHSCLFSQTNAGNEPDMEDEQVCCEALEVMTL
CFALIPTALDALSKEKAWQTFIIDLLLHCHSKTVRQMAQEQFFLMATRCCMGQRPLLFFI
TLLFTVLGSTARERAKHSGDYFTLLRHLLNYAYNSNINVPNAEVLLNNEIDWLKRIRDEV
KRTGETGVEETILEGHLGVTKELLAFQTPEKKYHIGCEKGGANLIKELIDDFIFPASNVY
LQYMRNGELPAEQAIPVCSSPATINAGFELLVALAVGCVRNLKQIVDTLTEMYYIGTAIT
TCEALTEWEYLPPVGPRPPKGFVGLKNAGATCYMNSVIQQLYMIPAIRNGILAIEGTGSD
VDDDMSGDEKQDNESNVDPRDDVFGYPHQYEDKPALSKTEDRKEYNIGVLRHLQVIFGHL
AASRLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVL
GGSFADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSLEQYVKGDLLEGANAYHCEKC
NKKVDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAK
LEGDDVNPENQIIQNEQSENEHSGSTKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKN
RWYKFDDGDVTECKMDDDEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYER
MDTIDKDNELIKYISEITITTKPHQIKMPSAIERSVRKQNVQFMHNRMQYSLEYFQFIKK
LLTCNSVYLNPPPGQDHLLPEAEEITMISIQLAARFLFTTGFHTKKIVRGPASDWYDALC
ILLRHSKNVRFWFAHNVLFNVSNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCQS
PFASPGPSSQAYDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGVAEKTQ
LLKLNVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLIRCCNVSSRMQSSINGNPPL
ANPYGDPNLSQPIMALQQNVADILFVRTSYVKKIIEDCSNSEETIKLLRFCCWENPQFSS
TVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNALKGIPDDRDGLFDTIQR
SKNHYQKRAYQCIKCMVALFGNCPVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNP
QYTYNNWSPPIQSNETSNGYFLERSHSARMTLAKACELCPEEMGGQSTDVNKQDVSVLLA
DVYTDQQVTVLALTPQHTQHTQGVIIPVPGCGVASVGAQAR
NT seq
3906 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtggacagtcgcaagcgttcatgcctgatataccttggagccagttgggttctt
ggggttgttttgtgtacccacttcgtgcactcttgtttgttttcacagacaaatgcagga
aatgaaccagacatggaagatgaacaagtttgctgtgaagcactggaggtgatgaccctg
tgctttgctttgattccaacggcactggatgcactcagtaaagagaaggcgtggcagaca
tttattattgatttactattgcactgtcacagcaaaactgttcgtcagatggcacaggag
caattctttttaatggctaccaggtgttgcatgggacagagacctctccttttcttcatt
accctgctgtttactgttctagggagcactgcaagagagagagctaagcattctggagac
tacttcacactcttaagacatcttcttaactatgcttacaacagtaatattaatgtaccc
aatgctgaagttcttctcaataatgaaattgactggcttaagagaatcagggatgaagta
aaaagaacgggagaaacaggtgttgaagaaacaatcttagagggtcaccttggagtaaca
aaagaattgttagcatttcagacacctgagaagaaataccatattggttgtgaaaaagga
ggtgctaatctcattaaagagttgatagatgatttcatctttccagcatctaatgtttat
ctacagtacatgagaaatggagaattgcctgctgagcaggccataccagtctgtagttca
ccagctaccattaatgctggctttgagctcctcgttgcactagcagttggatgtgtgcga
aatctcaagcagatagtagacacgttgactgaaatgtattacataggtacagcaatcact
acttgtgaagcgctcacagaatgggagtatctgccaccagttgggcctcgaccgccaaag
ggatttgtgggactgaaaaatgctggtgccacttgttacatgaattctgtcattcagcag
ctgtacatgattccagccattaggaatgggattcttgcaattgaaggcacaggcagtgat
gtagatgatgacatgtctggggatgaaaagcaggacaatgagagcaatgttgacccacga
gatgatgtgtttggttatccacatcagtatgaagataaaccagcactgagcaaaactgaa
gatagaaaggagtataatattggagttttgaggcatcttcaagtaatttttggccattta
gcagcttccaggctacagtactatgtaccgagagggttttggaaacagtttagactctgg
ggtgaacctgtaaatctacgtgaacaacatgatgctttagaattttttaattctttggtg
gacagtttagatgaagctttaaaagctttgggccatccagcaatgttaagtaaagtttta
ggagggtcctttgctgatcagaagatttgtcaaggatgcccacataggtacgagtgtgag
gaatccttcacaactctgaatgtagatataaggaatcaccaaaaccttcttgattctttg
gaacagtacgtcaaaggagatttattggaaggtgcaaatgcatatcattgtgaaaaatgc
aacaaaaaggtggatacagtgaaacgcttgttgattaagaagttgcctccagttcttgca
atccagttgaaacgatttgattatgactgggaaagggaatgtgcaatcaaattcaatgat
tattttgaatttccacgagaactggacatggagccttacacagtggcaggtgtagcaaaa
ttggaaggggatgacgtgaatcctgaaaatcagataatacaaaatgagcagtcggaaaac
gaacactctgggagcacaaaatacagactcgtgggtgtacttgtgcacagcggccaggcc
agcggcggacattactactcttacattatccagaggaatggtggagatggtgagaagaac
cggtggtacaaatttgatgatggagatgtgacagagtgtaaaatggatgacgatgaagag
atgaaaaatcagtgttttgggggagagtacatgggcgaggtgttcgatcacatgatgaag
cgaatgtcctacaggcgccagaagaggtggtggaatgcttacattcttttttatgaacgc
atggacacgatagacaaagacaatgaactaataaaatatatttcagaaattactatcacc
actaaaccccaccagattaaaatgccctcagccatcgagcgaagcgtgcggaagcagaac
gtgcagttcatgcacaatcggatgcagtacagcctggaatatttccagttcataaagaag
ttgcttacttgtaatagtgtctacctaaaccctcctccaggacaagatcatctgttgcct
gaagcagaagaaataactatgattagtattcagcttgctgctagatttctcttcaccaca
ggatttcatacaaagaaaatagtccgtgggcctgctagtgattggtatgatgccctgtgc
atcctgctccgtcacagcaagaatgtacgcttttggtttgcacacaacgtcctttttaat
gtttcaaaccgcttctctgagtatctcctggaatgccccagtgcagaagtgaggggtgca
tttgcaaaacttatagtatttattgcacatttttcattgcaagacggaccatgtcaatca
ccttttgcctctcctggaccttccagtcaggcttacgataacttaagtttgagtgatcac
ttactgagggcggtactgaatcttctaagaagggaagtatctgaacacgggcgccacttg
cagcagtatttcaatctgtttgtgatgtatgccaatctaggtgtagcagagaagacacaa
cttctgaaactaaatgttcctgcaaccttcatgcttgtggctctggatgaaggtccaggc
ccgccaattaaataccagtatgctgagctggggaagctgtacaccgtggtgtcacagctg
atccgctgttgcaacgtctcgtcgcggatgcagtcttctatcaatggtaatcccccactt
gccaacccttatggtgatcctaatttatctcaacctataatggcacttcagcagaacgta
gcagacattctgtttgtgagaactagttatgtaaagaaaattattgaagattgcagcaac
tctgaagagaccatcaagttgcttcgtttctgctgttgggagaatcctcagttctcttcc
acagtcctcagtgaactgctttggcaggttgcatattcatatacatacgagcttcgacct
tatttggatctgcttctgcaaatcctgttaattgaggactcttggcaaactcacaggatt
cacaatgcacttaagggaatcccagatgacagggatggactctttgacaccattcagcgc
tcgaagaatcattatcagaaaagagcttaccagtgtataaagtgcatggtagctctcttt
ggcaactgccctgtagcttaccagatccttcagagcaatggagatttgaagagaaaatgg
acctgggcagtggaatggcttggagatgagctggagcgcagaccttacacgggcaatccc
caatacacctacaataattggtctccaccaatacagagcaatgaaacatcaaatggctac
ttcctagagaggtcacacagtgctagaatgactcttgcaaaggcttgtgaactctgtcca
gaggagatgggaggacagagcacagatgtaaataaacaagatgtatctgtcctgctagct
gatgtttacacagatcagcaagtcacagtgttggctcttactccacagcacacacagcac
acacagggtgtgataatcccagtgccaggctgtggagtagcttctgtgggggcacaggca
cggtga
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integrated database retrieval system
