Oenanthe melanoleuca (Eastern black-eared wheatear): 130253719
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Entry
130253719 CDS
T09236
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130253719 (UBR1)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130253719 (UBR1)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
130253719 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
UBR1-like_wing
ClpS
zf-UBR
Motif
Other DBs
NCBI-GeneID:
130253719
NCBI-ProteinID:
XP_056348514
LinkDB
All DBs
Position
5:complement(26282816..26341984)
Genome browser
AA seq
1687 aa
AA seq
DB search
MLLVWRGPRCIPGETTTEQNLPALWKGVVMRVKFSTYHFCCRDCAVDPTCVLCIDCFQNS
IHKNHRYKMHSSTGGGFCDCGDTEAWKAGPVCTKHAPGASGSPKENSECQLNEEIMEHSR
RVFPSVIKYIVDMLIWEEENELPVELTISREKADSYYCVLFNDEHHSYDHVIYSLQRALG
CELGEAQLHTTAIDKEGRRAVKAGHYAACQEAKEEIKRHSENVSQRPLHVEVLHADVMAH
QKFALRLGSWLNKLMSYSSDFRQIFCQICLKEEAGSEKPCFISKLMLWDARLHKGARKVL
HELIFSSFFMEMEYKKLFAVEFVKYYKALQKEYINDDHDRVLSVTALSVQMFTVPTLARH
LIEEQNVITTITETLLEVLPEYLDKNDKFNFQGYSQDKLNRVYAVIYDLRYVLVSKPTVW
TDRLRERFLEGFVSFLRILTCMQGMEEIKRQIGQHIEVDPDWDAAIAIQMQLKNILLMFQ
EWCACDEELLLRSYRECHKAVMRCSSNGRSREKTVFHLCGHTLESKPYRVSADPVSIHLP
LSRTLAGLHVRLSKTGAISRLHEFVSPEEFQVELLVEYPLRCLVLVAQVAAEMWRRNGLS
LISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNQFLLLVLQRYELADAFKKIKPTKDQ
DLIKQYNVLIEEMLQILIYVVGERYVPGISNVTKDDVIRREIIHLLCIEPMAHSAITKSL
PENENNETGLENVIDKVATFKKPGVSGHGVYELKDECLKEFNMFFYHYTKTQHSKAEHTQ
KKRRKQENRDEALPPPPPPDFSPAFSNVVRILNCDVMMHILRTLLQRAVELETHLWTEAM
IQMVLHLLSLGLLEEKQQLQKCPEEEVTFDFYHKATRMGSSALNAVNVLMLVEKLKRVPQ
LEAQKDTVNWILQMFDMVKRLREKSSLATVGAASGSEAAKGDETQSTQDKEKAERKRKAE
AARLHRQKIMAQMSALQRNFIETHKLLYENTLESQGKGDAIMEEESISSAIDYSRIALGP
KRGPSVVEKEILTCILCQEEQEVKLESAAMVLSACVQKSTALTQNRSRILELSGDTLDPL
FMHPDLPCGTHTGSCGHVMHAACWQKYFEAMQLNFRQRLHVEQIFDLENGEYLCPLCKSL
CNTVIPIVPLQAQKINSEDAEAVAQILSLARWLEIVTARISGYSVKNAKGEKQNLPPFTN
KGTGNSALEFHSILSFGVQSSAKYSSSLKEMLILFATTIYRVGLKVAPNEADSRIPMMTW
STCAFTIQCIENLLETEGKPLFGSLQNRQHSGLKALVQFAAAQRTTSPQVLIQKHLIRLL
GVLLPNFKGEDTPSLLEVDMFHILVGAVLSFPSLYWEDAVDLQPSSVSSAYNHLYLFHLT
TLAHIMQIVISSAAESPTAHSSDNSEEAQSAQSFCREVCQYTSGCFSQDIPGWLVWDCVK
KGIMPYLRCAALFFHYLLGVSPPEELLQVSEEGQFKALCSYLSLPTNLFLLFHEYRDTVN
PLLQRWCADPVVLSCLKGKSIAIRYPRKRNHLIELPEDYSCLLNQASQFRCPRSSDDEQK
HPVLCLFCGAMLCSQNTCCQELVNGEELGACTSHALQCGAGVCMFLKIRECKVVLIEGKT
RGCLYPAPYLDEYGETDPGLKRGNPLHLCRERYRKLHLLWQQHCIIEEIARSQETNQIIF
GFNWQLL
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
atgttacttgtttggagaggacccagatgtattcctggagaaactacaacagagcagaac
ctcccagctctgtggaaaggtgttgtcatgagggtaaagttttccacttaccatttttgt
tgcagagactgcgcagttgatccaacttgtgtgctctgtattgactgcttccagaatagc
attcacaagaatcaccggtacaagatgcatagctccactggaggtgggttctgtgactgt
ggggatacagaggcatggaaggctggaccagtgtgtactaaacatgcgcctggagcatca
ggttctcccaaagaaaattctgaatgtcagttgaatgaagaaattatggagcattctagg
agagtgtttccctctgtgataaaatacattgtagatatgcttatctgggaggaagagaac
gaactgcctgtggagctcaccattagcagagagaaggcagacagctactactgtgtcctt
ttcaatgatgaacaccattcttatgatcatgtcatctacagcctgcaaagggcacttggc
tgtgaacttggtgaggcccagttgcatacgactgccatagataaagagggtcgtagagct
gttaaggcaggacattatgctgcttgtcaggaagcaaaagaagaaattaagaggcattct
gaaaacgtttctcaacgaccgctccatgtggaggtgctgcatgccgatgttatggcacac
cagaagtttgccttgcgccttggttcttggctgaacaaactcatgagctattcaagtgac
tttcgacagatcttttgtcaaatatgtctcaaagaagaagctggatctgaaaagccctgc
tttataagcaagttgatgctatgggatgcaagacttcataaaggggcaaggaaggttctt
catgaacttatcttcagtagttttttcatggagatggaatacaaaaaactttttgctgtg
gaatttgtgaagtattacaaggcattgcaaaaggaatacatcaacgatgatcatgacaga
gttctctctgtgacggcactttcagttcagatgttcactgtacccactctggcccgacac
cttattgaagagcaaaatgtaatcaccaccattacagaaacactcctagaagtgcttccg
gagtacttagacaaaaatgacaagttcaacttccagggctacagtcaggacaaactgaac
cgggtctatgcagtaatatatgacctcaggtatgtcttagtcagcaagcctacagtgtgg
acagaccgtctgagggagcgttttttagaaggatttgtttctttcctaaggattctaact
tgcatgcagggaatggaggagataaaaagacagattggtcagcacatagaggtggaccct
gactgggatgcagctattgccatacagatgcagctcaagaacattcttttgatgttccag
gagtggtgtgcctgtgatgaagagctgctgctcaggtcttacagagaatgtcataaagct
gtcatgaggtgcagctcaaatggccgctctcgggagaagacagtatttcacttatgtggc
cataccctggagagcaaaccctacagagtgtctgcagatcctgtcagcatacatttgcca
ctgtctaggactcttgctggtcttcatgtacgattaagcaagactggagccatctcaaga
ttgcatgagtttgtttctcctgaagagtttcaagtggagctgctggtagaatatcctttg
cggtgccttgtcctggttgcgcaggttgcagcagagatgtggagaaggaatgggctctcc
ctgattagccaggtattctattatcaagatgttaaatgcagagaagagatgtacgataaa
gacatcatcatgctccagataggtgcatctcttatggatccaaaccagtttctcctgctg
gtacttcagagatatgagcttgctgatgctttcaaaaagatcaaacccaccaaagatcag
gatttgattaagcagtataatgttttaatagaggagatgctacagatactcatttatgtt
gtgggggaaagatatgtgcctggaatcagtaatgtgacaaaagatgatgtaataaggaga
gaaatcatccatctattatgtattgagccaatggctcacagtgcaattaccaagtccttg
cctgaaaacgagaacaatgaaactggcttggagaatgtaattgataaagtggctacattc
aagaaaccgggtgtgtctggccatggagtttatgaactgaaagatgaatgtctgaaggaa
ttcaatatgttcttttatcattacactaagacccagcacagcaaggctgagcatacacaa
aagaaaagaagaaaacaagaaaatagggatgaagcattgccaccacctcctcctccagac
ttcagtcctgcattcagcaacgtggtgaggattctgaactgtgatgttatgatgcacatc
ctgcggacccttctgcagcgggcagtggagctggaaacccatttgtggactgaggcaatg
atccaaatggtgcttcacctcctttctttagggttactagaagagaagcagcagttacag
aagtgtcctgaagaagaagtaacctttgatttttatcacaaagcaacacgaatgggaagc
tcagccttgaatgctgtgaatgtattaatgcttgtggagaaattgaagagagttcctcag
ttagaggcacagaaggacacagtcaattggatactgcagatgtttgatatggtgaagaga
ttgagagaaaaatctagtttggcaacagtaggagctgcatcaggctcagaagctgcaaaa
ggggatgagacacagagcactcaggataaagagaaagctgagcggaagagaaaggcagaa
gcagcgaggctgcaccgtcaaaagataatggcccagatgtctgccttgcagaggaatttt
attgaaacccacaagctcctctatgaaaacacactggagtcccaggggaaaggtgatgct
attatggaagaagaaagcatctcttcagcaatagattactccagaatcgctttgggcccc
aaacgaggtccatctgttgttgagaaagagattttgacctgcattctttgtcaggaggaa
caggaagtaaagttggaaagtgctgccatggtattatctgcttgtgtgcagaagtcaact
gccttaactcagaataggagcagaattcttgaactctcaggagatacactagatcctctc
ttcatgcaccctgacttaccttgtgggacccacacagggagctgtggtcatgtaatgcat
gcagcctgctggcaaaagtactttgaagcaatgcagctgaacttccgacagcgtctgcat
gttgaacagatatttgacttggagaatggagagtatctttgtccactttgcaaatctctg
tgcaatactgtgatccctattgttccattgcaggctcaaaaaataaacagtgaggatgca
gaggcagtagctcaaatcctgtccctagctaggtggctggaaattgtcacagccaggata
tcaggctacagcgtgaaaaatgctaaaggagagaaacaaaatcttccacctttcaccaac
aagggaacagggaactcggctttggaattccattccatccttagttttggagttcagtcc
tcagccaagtactcaagcagtctcaaggagatgcttattctctttgccaccaccatttac
agagttgggctcaaagttgctcctaatgaagctgattcccggattcctatgatgacctgg
agcacatgtgcttttaccatccagtgtatagaaaacctcttggaaacagaggggaagcct
ttatttggatctctacaaaatagacagcacagtggccttaaagcattagtgcagtttgca
gctgctcagagaacaacatccccccaggtcctgattcagaaacatctgattcgtctccta
ggagttctcctaccaaactttaaaggggaggacactccatcactcttagaagtagatatg
ttccacattttggtgggagctgttttatcatttccatctttatactgggaagatgctgta
gacttgcaaccttcatcagttagttcagcctataaccacctctacctcttccatctgaca
acactggcacacataatgcaaattgtcatctcttcagcagcagaatcccctactgctcac
tcatctgacaacagtgaggaggcacagtctgcacaatctttctgtagagaggtttgccag
tacactagtggttgttttagtcaggatattccaggctggcttgtgtgggattgtgttaaa
aaaggcatcatgccttaccttcgttgtgctgctttattttttcattatttgctgggagtt
tctccacctgaggaactactgcaagtttctgaagaagggcaattcaaggcactttgtagt
tacctctctctacctacaaatttgttcctgctcttccatgaatatcgggacacagtaaat
ccactgcttcaaaggtggtgtgctgatccagtggtgttaagttgtttgaaagggaaaagc
attgcaataaggtatcctaggaaaagaaatcatttaatagagcttcctgaagactacagt
tgccttctgaaccaagcctctcagtttagatgcccacggtcttctgatgatgagcaaaag
cacccagtattgtgtttattctgtggggcaatgttgtgttcccagaatacttgctgtcag
gaactggtgaatggggaggagctgggagcctgtacttctcatgctcttcaatgtggagct
ggagtctgcatgtttcttaaaatcagggaatgcaaagttgtccttattgaaggtaaaacc
aggggctgcctatatcctgcaccctacttggatgaatatggagaaacagatccgggtcta
aaaagaggcaatcccctgcacttgtgtcgggagcggtaccggaagctccatctgctgtgg
cagcagcactgtatcatagaggagattgccaggagccaagaaacaaatcagatcatcttc
ggattcaactggcaattgctctaa
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integrated database retrieval system
