Oenanthe melanoleuca (Eastern black-eared wheatear): 130253723
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Entry
130253723 CDS
T09236
Symbol
HIF1A
Name
(RefSeq) hypoxia-inducible factor 1-alpha
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04137
Mitophagy - animal
oma04140
Autophagy - animal
oma04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130253723 (HIF1A)
04137 Mitophagy - animal
130253723 (HIF1A)
04148 Efferocytosis
130253723 (HIF1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130253723 (HIF1A)
Transcription factors [BR:
oma03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130253723 (HIF1A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
130253723
NCBI-ProteinID:
XP_056348522
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All DBs
Position
5:complement(55040222..55074351)
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AA seq
809 aa
AA seq
DB search
MDSPGGVSDKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHTVSAHLDKASIM
RLTISYLRMRKLLDAGELETEAKMEKELNCFYLKALDGFVMVLSEDGDMIYMSENVNKCM
GLTQFELTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTSRGR
TVNIKSATWKVLHCTGHIRVYDTCGNQTHCGYKKPPMTCLVLICEPIPHPSNIEVPLDSK
TFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQV
TTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGIVQKDLIFSLGQTECM
LKPVDSPDMKMTKIFSKDDLDDTNSLFEKLKQEPDALTVLAPAAGDTIISLDFSSNESDE
QQCDEVPLYNDVMLPSSSEKLQNINMAMSPLPASETTKPLRSNADPALNREVVSKLEPNT
EPLELSFTMPQVQEQPTSPSDASTSQSSPEPSSPNDYCFDVDNDMASEFKLELVEKLFAI
DTEAKNPFSTQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPPSAGSMAMFQPS
APAAGRPEEARPAERGDDATAAAGPSSPARAAPEPGSAPASPYGGSSRTASPIRAGKGAV
DQAEKPSPGAPSLLTVTLNKRSTALDEELNPKMLALHNAQRKRKMEHDGSLFQAVGIGSL
FQQTGDSGGNASLAWKRVKGCKTNGHGGVEQKTIILLSTDIASKLLGQSMDESGLPQLTS
YDCEVNAPIQGNRNLLQGEELLRALDQVN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggacagccccggcggcgtcagcgacaagaagaggattagctcggaacgcaggaaagag
aagtcgagggatgcggcgcggtgccggaggagcaaggagtcggaggtgttctatgagctg
gctcaccagctgcccctgccgcacacggtgagcgcgcacctggacaaggcgtccatcatg
cgcctgaccatcagctacctgcgcatgaggaagctgctggatgctggtgagctggagaca
gaagccaaaatggagaaggaactgaactgtttctacttgaaagctcttgatggctttgtc
atggttctgtctgaagatggggacatgatttacatgtctgaaaatgtgaacaagtgtatg
ggactcactcagtttgagttgacggggcacagtgtatttgatttcactcatccatgtgac
cacgaggagctgagagaaatgcttacacacagaaatggtcctgtgaaaaagggcaaagag
cagaacacggagcgcagcttttttctcagaatgaagtgtacactgactagcaggggaaga
acagtgaatataaagtctgctacatggaaggtgctgcactgcactggccacatccgtgtg
tatgacacgtgtgggaaccagactcactgtggatacaaaaagcctcccatgacctgcctg
gtgttgatctgtgaacccattcctcacccgtcaaacattgaggtccccctggacagtaaa
accttcctcagtcgtcacagtcttgatatgaaattttcctattgtgatgaaagaattaca
gagttgatgggctacgagccagaggagctcctgggtcgctcgatctatgagtactatcat
gcactggattctgatcatctgaccaaaacacaccacgacatgttcacaaaaggacaggtg
acaacaggacagtacagaatgctggccaaacaaggtggctatgtctgggttgaaactcaa
gcaactgttatatacaacactaagaattctcagccacagtgcatagtgtgtgtgaactat
gtgttgagtggaattgttcagaaggacttaattttttcccttggacaaactgagtgtatg
ctgaaaccagtggactctcctgacatgaaaatgaccaaaatattcagtaaagatgacctg
gatgataccaacagcctatttgaaaaactcaaacaggaaccagatgctttaactgtgctg
gccccagctgctggagacacaattatctctctagatttcagcagtaatgagtctgatgaa
caacaatgtgatgaagttcctttgtataacgatgtaatgctcccctcatccagtgagaaa
ttgcagaatataaatatggcaatgtccccactacctgcctctgaaactacaaagccactt
cgtagcaatgctgatcctgcactcaatagagaagttgtatcaaagctggagccaaacaca
gagccacttgaactttcttttaccatgcctcaggtgcaggagcaaccaaccagcccttct
gatgcaagtaccagccaaagttcacctgagcccagtagtcccaatgactactgctttgat
gtggataatgatatggccagtgaattcaaactggaattggtggagaaactctttgccata
gatacagaagcaaaaaatccattctctactcaggaaaccgatttagatttagagatgttg
gctccttacatcccgatggatgacgacttccagctgcgctcgttcgaccagctgtcgccg
ctggagagcagctcctccagcccgccgagcgcaggcagcatggccatgttccagccgagc
gcgccggcagcgggccggccggaggaggcgcggccggcggagcgcggggacgatgccacg
gcggccgcgggcccgtcctcgcccgcgcgcgcggcgcccgagcccggcagcgcccccgcc
tcgccctacggcggcagcagccgaaccgcctctcccatcagggcgggcaaaggagcagtg
gatcaggcggaaaagccttctccaggagcacccagcttgctaacagtcactctgaataaa
agatctactgcactggatgaagaactaaatccaaagatgctagctttgcataatgctcag
agaaaacgaaaaatggaacatgatggttcactttttcaggcagttggaattgggtcttta
ttccagcagacaggtgacagtggaggaaatgcatcacttgcttggaaacgtgtaaaggga
tgcaaaacaaatggtcatggtggagtggagcaaaagacaatcattctactatcaactgac
atagcaagtaaacttctagggcagtcgatggatgagagcggactcccccaactcacgagt
tacgactgtgaagtaaacgctcccatacaaggcaacagaaacctgctacagggggaagaa
ctgctcagagctctggatcaagttaactga
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