Oenanthe melanoleuca (Eastern black-eared wheatear): 130253907
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Entry
130253907 CDS
T09236
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03022
Basal transcription factors
oma03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130253907 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
130253907 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130253907 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
oma03400
]
130253907 (GTF2H1)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
130253907 (GTF2H1)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
130253907 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
GeBP-like_C
Motif
Other DBs
NCBI-GeneID:
130253907
NCBI-ProteinID:
XP_056348909
LinkDB
All DBs
Position
5:14234051..14256044
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLIVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLSLNAGDNSAAPSKQDVGISAAFLADVRPQTDGC
NGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEREFWTRFFQSHYFHRDRLNTGSKD
LFAECAKLDEKGLKAMVSQGVKNPLIDLTALEDKTLDEGYGVASVASTSNASKSARESSN
AAIIKRFNHHSAMVLAAGLRKQEAQNDHYSETSSTDGNSRDSDFFQPPLKKVKLQEAIEY
EDLSKNNSVKTIALNLKKSDRYYHGPTPIQSQQYATSQDIINSFNSIRQEMESYVPKLTQ
VLSSGDAASTIAVLSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMRSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKFHTWQ
SRRMLKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacatcatctgaagaagtgctgctgatagtgaagaaggtgcgtcagaagaagcag
gatggggccctgtacctgatggctgaacgcattgcctgggcacccgagggcaaggaccgc
ttcaccatcagccacatgtatgcagacatcaaatgccagaaaatcagtccagaaggtaaa
gctaaaattcagctgcagctggtattgcatgcaggggacacaaccaacttccacttctcc
aatgaaagcacagcagtaaaggagcgagatgcagtcaaggatcttcttcaacaactgttg
cccaagttcaaaaggaaagctaataaagaacttgaggaaaagaacagaatgctgcaagaa
gatcctgttttgtttcagctctataaagaccttgttgtgagccaagtaatcagtgctgaa
gaattctgggccaaccgtttaagcctgaatgcaggggataattctgcagcacctagtaag
caggatgtgggcatctctgcagcattcctggctgatgtacggcctcagacagacggctgc
aacgggctgaggtacaacttgacttcagacattattgaatccatatttaggacataccct
gcagtaaaaatgaaatatgcagagaatgttccacataacatgactgagagggaattctgg
acacgattttttcagtctcattattttcatcgggacaggctcaatacaggctcaaaagac
ctctttgcagaatgtgccaaactggatgagaaagggttaaaagcaatggtgtctcaagga
gtgaaaaaccccctgatagatttaacagctttggaagataaaacattagatgaaggctat
ggtgttgcttctgtggcctctacatcaaatgcctcaaagtctgctagagaaagtagtaat
gctgccatcataaaacgctttaatcatcatagtgccatggtccttgcagctggcctcagg
aaacaagaagcacaaaatgaccattacagtgagaccagcagtacggatggaaactccagg
gattcagatttctttcagccaccactgaaaaaggtaaaactgcaggaggccattgaatat
gaagatttatcaaagaataatagcgttaaaactattgcactaaacttaaagaagtctgat
aggtattaccatggtccaactccaattcaatcacagcaatatgcaaccagtcaggatata
attaattcatttaatagtattagacaagaaatggaatcatatgtacccaaactaactcag
gttctttcaagtggtgatgctgccagcactattgcagtcctgtcacctggaggagcactt
atgcagggtggaacacagcaagccataaaccagatggtgccaaatgacattcagtctgaa
ctaaaacacttgtatgtggcagtaggggaactgctacgacacttctggtcctgcttccct
gttaacacaccattcctagaagaaaaggttgtgaaaatgaggagcaacttggaaagattt
caggttacaaagctctgcccattccaagaaaagattcggagacaatatttaagcacaaat
ttggtaagtcatatagaagagatgctgcagacagcctacaataagttccacacgtggcag
tcccggcgcatgctgaagaagacgtga
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