Oenanthe melanoleuca (Eastern black-eared wheatear): 130254020
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Entry
130254020 CDS
T09236
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4 isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
130254020 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
oma03051
]
130254020 (PSMC1)
Proteasome [BR:
oma03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
130254020 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_2
AAA_22
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_28
AAA_14
AAA_25
AAA_3
RNA_helicase
ATPase
IstB_IS21
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
Parvo_NS1
NB-ARC
ABC_tran
PhoH
AAA_24
NACHT
Prot_ATP_ID_OB_N
AAA_18
AAA_30
TsaE
Motif
Other DBs
NCBI-GeneID:
130254020
NCBI-ProteinID:
XP_056349135
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Position
5:44495650..44503800
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AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGSKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggacatggtcctggtggtagcaagaaggacgacaaggat
aagaagaagaaatatgaacctccagttccaactagagtggggaaaaagaaaaagaagacc
aagggaccagatgctgccagcaaactccctctggtgactcctcacacacagtgcagactc
aagttgctgaaattggagagaattaaagattacctcttaatggaggaagagtttatcaga
aatcaagaacaaatgaaacctttggaagaaaaacaagaggaggaaaggtccaaggtggat
gatctgagaggaacaccaatgtctgttggtaccttggaggagatcattgatgacaaccat
gccattgtgtccacatcagtgggatcagagcactatgtcagtattctgtcttttgtggac
aaggacctgctagaaccaggctgctctgttttgctaaatcataaggtgcatgctgtgata
ggagtcctgatggatgacacagaccctttggtgactgtgatgaaagtagagaaagctcct
caagaaacgtacgctgatattggtggccttgacaaccaaattcaagaaatcaaggagtct
gtggagcttcctctcacccaccctgaatattatgaagagatgggtataaagccccccaaa
ggagtcattctgtatggcccacctggcacaggcaaaactttacttgccaaagcggtggca
aaccaaacgtcagcaaccttcctgcgagtggttggttcagagctcatccagaagtacctg
ggtgacggcccgaagctggtgcgcgagctgttccgcgtggctgaggagcacgccccctcc
atcgtcttcatcgatgagatcgatgccattggcacaaagaggtatgactcaaattcggga
ggtgagagagagatccagcgcacaatgttggagctgctgaaccagctggatgggtttgac
tctcggggagatgttaaagttatcatggctacaaacagaatagaaacactggacccagcc
ttaattagaccaggacgtattgatagaaaaatagagttccctctacctgatgaaaagacg
aagaaacgaatctttcagattcacacaagcaggatgacgttggcagatgatgtgactttg
gatgagctgattatggcaaaagatgatctcagtggtgcagatattaaggcaatttgcaca
gaagctggattgatggctttaagggaacggagaatgaaagtaacaaatgaagatttcaaa
aaatctaaagagaatgttctctataaaaagcaagagggaacccctgagggactgtatctt
taa
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