Oenanthe melanoleuca (Eastern black-eared wheatear): 130254370
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Entry
130254370 CDS
T09236
Symbol
SNW1
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040
Spliceosome
oma04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130254370 (SNW1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
130254370 (SNW1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130254370 (SNW1)
Spliceosome [BR:
oma03041
]
Complex B
Other components
Prp19-related factors
130254370 (SNW1)
Complex C
130254370 (SNW1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Amidohydro_1
SIR4_SID
Motif
Other DBs
NCBI-GeneID:
130254370
NCBI-ProteinID:
XP_056349789
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Position
5:complement(39930044..39948108)
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AA seq
538 aa
AA seq
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MALTSFLPAPTQLSQDQLELEERARAQRSRQTALVSSRREPPPYGYRKGWIPRVLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAVQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNVDDPELQRPDEEAIREITEKTRAALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRPSNEIQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQPWRSGKDMAQNIYRPSKNVDKDMYGDDLEARIKTNRFVPDKEFSN
SDRNTRGRGRDGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHESKKRRKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcaccagttttttgccagctccaacccagctgtcccaagatcagctagaatta
gaagaaagagcaagagctcagagatccaggcagactgctctggtctcatcacgaagggag
cctcccccatatggttaccggaaaggatggataccacgggtgctggaggattttggagat
gggggtgctttcccagaaatacatgtggcccaatatccattggatatgggccgaaagaag
aagatgtccaatgctttggctgtgcaggtggatgcagaaggaaaaataaaatacgatgca
attgctcgacaaggacagtcaaaggacaaggttatttacagcaagtacacagatcttgtg
ccaaaagaggtcatgaatgtggatgatcctgaactgcaaagaccagatgaggaagcaatt
agagagataacagagaagacaagagcagccttggagaaatcggtctcccaaaaagttgca
gcagccatgccagttcgagctgctgacaaactagctcctgcacagtacattcggtacaca
ccatctcagcagggagttgcgttcaactctggagcaaaacagagagttattcggatggtg
gaaatgcagaaggaccctatggagcctccaagattcaaaattaacaagaagattccacga
ggaccaccatctcctccagcacctgtaatgcactctccaagtagaaagatgactgtgaaa
gagcagcaagagtggaaaattcctccgtgcatttcaaactggaaaaatgcaaagggttac
accattccgttagataagcgtctggctgcagatggcagaggattgcagactgttcatatt
aatgaaaacttcgccaaacttgctgaggcgctctatattgctgacagaaaggctcgtgag
gctgtagagatgcgtgcccaggtggagaggaagatggctcagaaagaaaaggagaaacac
gaggaaaagctccgagaaatggctcagaaagccagggagagaagagcagggatcaaaacc
cacgttgaaaaagaggatggagaagctagagaaagagacgaaatcagacatgacaggcgc
aaagagagacagcacgacagaaatctttcccgggcagcccctgataaaaggtcaaagctg
caaagaaatgagaacagagatatcagtgaagttattgccctgggggtgcccaaccccagg
ccatccaatgaaatccaatatgaccaaaggctgttcaaccagagcaaggggatggacagt
ggctttgctggaggagaggatgaaatttataatgtttatgaccagccttggagaagtggc
aaggatatggcccaaaatatctacaggccaagtaaaaatgtggataaggacatgtatggt
gatgatctagaggctcgaataaagaccaacaggtttgttcctgacaaagagttttccaac
tcggaccgtaacaccagaggcaggggcagagatggaccagttcaatttgaggaggatcca
tttggtttggacaagtttctggaagaagctaagcaacatggtggttctaaacggccatca
gacagcagccgccctaaggaacatgagcatgagagcaaaaagaggaggaaggactga
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