Oenanthe melanoleuca (Eastern black-eared wheatear): 130254468
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Entry
130254468 CDS
T09236
Symbol
DEAF1
Name
(RefSeq) deformed epidermal autoregulatory factor 1 homolog isoform X1
KO
K23041
deformed epidermal autoregulatory factor 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oma03000
]
130254468 (DEAF1)
03019 Messenger RNA biogenesis [BR:
oma03019
]
130254468 (DEAF1)
Transcription factors [BR:
oma03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
130254468 (DEAF1)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130254468 (DEAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAND
zf-MYND
DUF5649
Motif
Other DBs
NCBI-GeneID:
130254468
NCBI-ProteinID:
XP_056349973
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Position
5:complement(9604702..9634975)
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AA seq
609 aa
AA seq
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MEHSDGDPAAGQIGLPAGPGQQQEPPQAVEGEAEPEEEEEAVTVMAADAEHIEMGAPSMP
SADEAAAAAAFAEVTTVTVANVGASADNVFTTSVANAASISGHVLSGRTALQIGDSLNPE
KATLIVVHTDGSIVETTGIKGPSAPLTPGPQSPPTPLAAVQGKSGTKYNWDPSVYENELP
VRCRNISGILYKNRLGSGGRGRCIKQGDNWYSPTEFEAMAGRASSKDWKRSIRYAGRPLQ
CLIHDGILNPHAASCTCAACCDDMTLSGPIRLFVPYKRRKKENEIPATPVKKNCSKNITL
LPATAATTFTVTPSGQITTSGALTFDRASTVEATAIISESPAQGDVFTGATGPCSPAVQD
TNVQQPCRVSHPEPHYPSYQDNCQISPFPEAALPTSHPKIVLQILRFGQAGFSSVGSFSL
FIVNFDLLILPEAAAVILHLLTSLPALAVPPTTPTKAMSPSVVNRLEVTEQRSWLYLEEM
VNSLLSTAQQLKTLIEQAKQASSSFREAAVTQAKIQADVERKEQYQSQLFQQTEDVDGKT
EIIIKQSCVNCGREATNECTGCHKVNYCSTFCQRKDWKDHQHICGQSATVTVQGDEVHVP
DNVMEKVTV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagcacagcgacggcgacccggccgccggacagatcggcttgcccgcgggacccggg
cagcagcaggagccgccgcaggcagtggagggggaggcggagcccgaggaggaggaggag
gcggtaacggtgatggcggcagacgccgagcacatcgagatgggagccccgtcaatgcca
agcgccgacgaggccgccgccgccgctgccttcgcagaagtcaccacagtcacagtagcc
aacgtgggtgcctctgcagacaatgttttcaccacatctgtggccaatgcagcttcaatt
tcaggacatgtgttgtctgggagaacagccctccaaattggggacagcttgaaccctgaa
aaagccactctgatagtggtgcacacagatggcagcatcgttgaaaccaccgggatcaag
gggccttcagcacccctcacaccaggaccacagtctcctcctacccctttggcagctgtc
caggggaaaagtggaaccaagtacaactgggacccgtctgtgtacgagaacgagctcccg
gtgcggtgccggaatatcagtggcattctgtacaagaacaggctgggctcaggaggccgt
ggcaggtgcattaagcaaggggacaactggtacagccccacagagtttgaagccatggcg
gggcgagccagcagcaaggactggaagaggagcatccgctacgccgggcggcccctgcag
tgccttatccacgatgggattttaaatccccatgctgcctcgtgtacttgtgctgcttgc
tgtgacgacatgacactgagtggccctatacgactctttgtgccatataaaaggcggaaa
aaagaaaatgaaatacctgcaactccagtgaagaagaattgttccaaaaacatcactctg
cttccagccactgctgcaactacattcaccgtgactccctctggacagatcacgacctcc
ggggcgctgaccttcgaccgggcatccaccgtggaggccacggccatcatctcagagagc
ccagctcagggggatgttttcactggagccactggcccttgttctcctgcagttcaggac
accaacgtccaacagccttgccgagtgtctcatccagagcctcactatcccagttaccag
gacaactgccagatctcacctttccctgaggctgcactgccaacatctcatcccaaaatc
gttttacagatactaagatttggacaagcaggtttctcctctgtgggaagtttttcactc
tttattgtgaactttgatttgttgattctgccagaggcggctgctgtgattttgcatttg
ttgacctctctgcctgccctggcagtgccccccacgacgcccaccaaagccatgtcaccg
tcggtggtgaacaggctggaggtgacggagcagcggagctggctctacctggaggagatg
gtcaattccctgctcagcacagcacagcagctgaagactctgattgagcaggccaagcag
gccagctcctccttccgcgaggctgctgtcacacaggccaagatccaggctgatgtggag
aggaaagagcaataccagagccagttattccaacaaacagaggatgtggatgggaagaca
gaaatcatcatcaagcaatcctgcgtcaactgcggacgggaggccaccaacgagtgcacg
ggatgccacaaagtcaactactgctccaccttctgccagcggaaggactggaaggaccac
cagcacatctgtggccagtcagccacggtgacggtgcaaggggatgaggtgcacgtcccg
gacaatgtcatggagaaggtcaccgtgtga
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