Oenanthe melanoleuca (Eastern black-eared wheatear): 130254476
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Entry
130254476 CDS
T09236
Symbol
RTN1
Name
(RefSeq) reticulon-1 isoform X1
KO
K20721
reticulon-1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130254476 (RTN1)
03036 Chromosome and associated proteins [BR:
oma03036
]
130254476 (RTN1)
Membrane trafficking [BR:
oma04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
130254476 (RTN1)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
130254476 (RTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
DUF4736
ArsP_1
Motif
Other DBs
NCBI-GeneID:
130254476
NCBI-ProteinID:
XP_056349996
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Position
5:55804062..55919779
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AA seq
750 aa
AA seq
DB search
MSAPPDPQELLLAGTGAHWAADGAEMRDGDGAQQREQLGFGSAREHPPVTMATASPGVTG
SSHLFDFGSTANGGDNSFYTSLISDVHYTTPRDSTYFTGIYQQENTPIPCSGSTEGFNAL
GHPVQDVTGFESRGLFSSDSGIEMTPAESTEVDKTLADPMKVEAYKYMDMSRSEEIKYQG
NYDSDSEDESPGLSDKYRGAPAGSGHAAQPPRAPSESTKAAKEQDLLEDRRCGAQHSPSV
ATSPVKITLTETDSTKEAASKEPSPTQPDAGLKPSREVVPTVTVSEPEDDSPGSVTPPSS
GTEPSGSESQGKGSLSEDELISAIKEAKSFSLEAAEAPRPAAAAAEKREQRKPGRAPAAP
HGDHDASSAESGDSEIELVSEDPLAAEEVLHSNYMTFSHIGGPPPSPASPSIQYSILREE
REAELDSELIIESCDASSASEESPKREQDSPLMKPKVMDIIKEENNARTDASDYEAGKMT
ESRMNRENLAESSSYLKSSFVAPKTGAEPPTSAVSTEELKERVKLKKPIEETVVNQSKVS
SKDFGKKSPLASFLLPFLNKQKAIDLLYWRDIKQTGIVFGSLLLLLFSLTQFSVVSVVAY
LALAGLSATISFRIYKSVLQAVQKTDEGHPFKAYLEMEMNLSQDQIQKYTDCLQLYVNST
VKELRRLFLVQDLVDSLKFAVLMWLLTYVGALFNGLTLLIMAVVSMFTLPVVYDKYQAQI
DQYLGLVRTHINTVVAKIQAKIPGAKRKAE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccccgccggacccgcaggagctgctgctggcgggcactggggcgcactgggct
gcggacggggcggagatgcgggatggagatggggctcagcagcgggagcagctggggttc
ggctccgccagggaacacccgcccgttaccatggcgactgcatccccaggtgtcacaggc
tcctcacatctctttgacttcggctccaccgccaacgggggggacaactccttctacacc
tctctgatctctgatgtccactacaccaccccacgggactccacctatttcactggcatc
tatcagcaggaaaacacccccattccctgctcaggcagcacagaagggtttaatgctctg
gggcatcctgttcaagacgtgactgggtttgagtcccgtggcttgtttagctcagactcg
ggaatagagatgactcctgccgagtctactgaagtcgacaaaaccttagcagatcccatg
aaagtagaagcttacaaatacatggacatgagtagatcagaagaaataaagtaccaagga
aattatgactctgactcagaagatgagagcccaggccttagtgacaagtaccggggagca
cccgcagggtccggccacgccgcccaacctccgcgggcgccctcggagagcacaaaggca
gccaaggagcaagacctgctggaagacagaaggtgtggggctcagcacagtccctctgtg
gctacaagccctgtcaagatcacactcaccgagacagacagcaccaaggaagctgccagc
aaagagccgagcccgacccagccggacgccggcctgaagccgagccgagaggtggtgcca
acggtgacggtgtcagagccagaggatgacagcccaggatctgtcacacccccctcctct
ggcacagaaccatccggctcagagtcgcagggcaaaggcagcctgtcggaggacgagctc
atcagtgccatcaaggaagccaagagcttttccctggaggcggcggaggctccgcgcccg
gcagccgcggccgcggagaagcgggagcagcgcaagcccggccgcgctcccgcagccccg
cacggcgaccacgacgccagcagcgccgagtccggcgactcggagatcgagctggtctcg
gaggacccgctggccgccgaggaggtgctgcactccaactacatgaccttcagccacatc
ggcgggccgcctccgtcgcccgcctcgccctccatccagtacagcatcctgcgggaggag
cgggaggcagagctcgacagcgagctcatcatcgagtcctgcgacgcctcgtcggcctcg
gaggagagccccaagagggagcaggactcgccgctgatgaagcccaaggtcatggacatc
atcaaggaggagaacaacgcgcgcactgacgcctcggactacgaggccggtaaaatgacg
gagagcaggatgaacagggagaacctggcagagtcctcgtcctacctgaaaagctccttt
gttgcaccaaaaacaggcgccgagcccccgacctctgccgtcagcaccgaggagctgaag
gaaagagtaaaactgaagaaacccattgaagaaactgttgttaaccaaagtaaagtgtct
tctaaggactttggcaaaaaaagtcctttggcttcgttcctactgccgtttttaaataag
cagaaagctatcgacctgttgtactggcgtgacatcaagcagacagggatcgtgtttggc
agcctgctgctgctgctcttctccctgacccagttcagcgttgtcagcgtggtggcttac
ctggccctggctggtctctcagccaccatcagcttcagaatctacaaatcagtgctacag
gctgtgcagaagacggacgagggccaccccttcaaagcctacttggagatggagatgaat
ctttcacaggaccagatccagaaatacacagattgtctccagctatatgtcaacagcaca
gtcaaagagctgaggagactctttctcgttcaggacctcgtggattctttaaaatttgca
gtactaatgtggctgctgacttatgtgggagccctcttcaatggcctgactcttctgata
atggctgtggtgtctatgtttactctccctgttgtatatgacaagtaccaggcacagatt
gatcaatacttggggctggtgcggacccacataaacacggtggtggcaaagattcaagct
aaaatcccaggtgctaagagaaaggcagagtaa
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