Oenanthe melanoleuca (Eastern black-eared wheatear): 130254533
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Entry
130254533 CDS
T09236
Symbol
CTR9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130254533 (CTR9)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
130254533 (CTR9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_8
TPR_16
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_9
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
130254533
NCBI-ProteinID:
XP_056350145
LinkDB
All DBs
Position
5:complement(10449736..10470049)
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AA seq
1168 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDNKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSPNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFSRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYGKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSSFVLPFFGLGQMYIYRGDKENA
SQCFEKVLKAYPNNYETMKILGSLYAASEDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNVGALHFRLGNLGEAKKYFLASLDR
AKAEAEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDPKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLRKFYKHQNTEVL
LYLARALFKCGKLQECKQTLLKARHVAPSDTVLMFNVALVLQRLATSVLKDEKSNLKEVL
NAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLLSQAQYHVARARKQDEEERE
LRAKQEQEKELLRQKLLKEQEEKRLREKEEQKKLLEQRAQYVEKTKNILMFTGEVEGSKE
KKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPISRKKKKRKGSGSEQDGEEEEGERKKKKR
RRPQKAEEGSDDEEHENGPRPKKRRPPKAEKKKAPKPERLPPSMKGKIKSKAIISSSDDS
SDEDKLKIADDGHARNSNSDSEDGEQQHSKRIVSDSDSDARNKSGSEAGTPRRSSARASE
EESDSDRSPRKRRRSESEQSDNESVQSGRSRGSGGSENESRPASRSAESDRDSERGSDHE
GSARASGNESEPEASNDEGSEGGSDDSD
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggctccatcgagatccctctgcgggacacggacgaggtcatcgagcttgac
ttcgatcaattgcccgagggtgatgaagttataagtatactgaaacaggaacacacccag
ctgcacatatggattgccctagcgctggaatactacaagcaaggcaaaacagaagacttt
gtgaagctgctggaagctgcccgcatcgatggcaacctggactacagagaccacgagaaa
gatcagatgacatgtctggacactctggcagcctactatgtccagcaggctcggaaggag
aagaacaaagacaacaagaaagagctcatcactcaggccaccctgctgtacactatggct
gacaaaatcatcatgtacgatcagaatcacttgttgggaagagcctgcttttgcctgctt
gaaggtgataagatggaccaagctgatgcacagttccacttcgtgctcaaccagtctcca
aataatattcctgcccttctcggtaaggcatgcatttctttcaacaagaaggattataga
ggagcccttgcctactacaagaaagcactgcgtaccaatccaggctgcccagctgaggtt
cggttgggaatgggccactgcttcgtgaaactgaacaagctggaaaaagctcgcttggcc
ttcagcagggctctggagctgaattccaagtgtgtcggggccttggttgggctggctgtt
ctggaactcaataataaggaggctgattccatcaagaatggtgttcaactcctctctaga
gcttacactattgatcccagtaatccaatggtgttgaatcacttggctaatcacttcttt
ttcaagaaggactatggtaaagtgcaacatttggctcttcatgctttccataacacagaa
gtggaagcgatgcaggcagagagctgttaccagctggcgaggtcttttcatgtgcaggaa
gattatgatcaagctttccagtattattaccaggccactcagtttgcctcatcttctttc
gtacttccgttttttggattgggtcaaatgtacatttatcgaggggacaaagagaatgct
tcacaatgctttgaaaaagtcttgaaagcctatcctaacaattatgagactatgaaaatc
cttgggtctctttatgcagcttcagaagaccaggagaaacgggatattgcaaaggggcat
ttaaagaaagtcacagaacaatatcctgatgatgtagaggcatggattgagctagcccaa
attctagaacagactgatatacagggtgctctgtcagcctatggaacagccacacgcatt
ctgcaggagaaagtacaggctgatgtcccgccagagatcctgaataatgtgggtgccctg
cacttcaggctgggaaacctgggagaagcaaagaaatacttcttggcctcgctggatcgt
gcaaaggcagaggctgagcatgatgagcattactacaatgccatctctgtgacaacatcc
tacaaccttgccaggctctacgaggccatgtgtgaatttcatgaagcagaaaagctctat
aaaaacattttgagagaacatccaaattacgttgattgctacttgcgcttgggagctatg
gccagggataaagggaatttttatgaggcttctgattggtttaaagaagcacttcagata
aatcaggatcatccagatgcttggtctctgattggcaatcttcatttggctaaacaagag
tggggtccaggacagaagaaatttgaaagaatattgaagcagccctccacacaaaatgat
acttattccatgctggctcttggcaatgtctggttgcagactctccatcaacccacaaga
gacagagaaaaggagaaacgtcaccaggaccgtgcattagccatctacaagcaagtcctc
agaaatgacccaaagaacttgtatgctgctaatggcataggagctgtcttggcacataaa
ggatatttccgtgaagctcgtgatgtttttgcccaagtgagagaggccacagcagatatc
agcgatgtgtggctgaatttggcacatatctacgtggagcagaaacagtacatcagtgct
gtgcagatgtatgaaaactgcctcagaaagttctataagcatcaaaacactgaagtgttg
ttatatttggcccgggcgctgtttaaatgtggcaaattacaggaatgcaaacaaactttg
ttaaaggccaggcatgtggctccaagcgatacagtcctcatgtttaatgtggctttagtg
ctgcaaagacttgctacctctgtcctgaaagatgaaaaaagcaatctgaaggaagtgctt
aatgctgtgaaagagctggagcttgcccacaggtacttcagttacttgagtaaagtaggt
gataagatgagatttgacttggcacttgctgctacagaagccaggcaatgctctgactta
ctgagccaggcccagtatcacgtggctcgggcacgcaagcaggatgaggaggagagggag
ctgcgtgccaagcaggagcaggagaaggagctgcttcgccagaaactgcttaaagaacag
gaagagaagcgcctgagagaaaaagaagagcagaagaaacttctggaacaaagagctcaa
tatgtggagaagaccaagaatattctgatgttcactggtgaagtagaaggatcaaaggag
aaaaaacgtggtggcggtggaggcaggcgttccaagaaaggagcaggggagtttgacgag
ttcgtcaatgatgacagtgatgaagatctgcccatctccagaaagaaaaagaagaggaag
ggcagtggcagtgaacaggatggggaagaagaggagggtgagagaaagaagaagaagagg
aggagaccccagaaggcagaagaagggagtgatgatgaagaacacgaaaatggcccgcgg
cctaaaaagcgacgtccacccaaagcagagaagaagaaggctcccaaaccagaacgtctg
cctccttcaatgaaaggaaagatcaaatcaaaagccatcatttcatcaagtgatgattct
tctgatgaggacaaactcaaaattgctgatgatgggcacgctagaaacagcaacagcgat
tccgaggacggggagcagcagcacagcaaacgcatcgtttccgacagcgattccgatgcc
aggaacaagtccggcagcgaggccggcactccccgcaggtccagcgcccgcgcgtccgag
gaggagtctgacagcgacaggtccccgaggaagaggcggcgctccgagtcggagcagtcg
gacaatgagtccgtgcagtcggggaggagccgcggctccggcggctccgagaacgagtcg
cgcccggcctcgcgcagcgccgagtccgacagggactccgagaggggctctgaccacgag
ggctctgccagagcttccgggaacgagtccgagccagaggcatccaatgatgagggctct
gaagggggctcggatgacagcgattag
DBGET
integrated database retrieval system
