Oenanthe melanoleuca (Eastern black-eared wheatear): 130254586
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Entry
130254586 CDS
T09236
Symbol
MSH4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130254586 (MSH4)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130254586 (MSH4)
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GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
AAA_14
nSTAND3
AAA_22
ATPase_2
AAA_28
AAA_30
AAA_18
AAA_23
CTD
Motif
Other DBs
NCBI-GeneID:
130254586
NCBI-ProteinID:
XP_056350218
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Position
6:34819404..34843822
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AA seq
876 aa
AA seq
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MAGGGGVVTTSDSYTGRGSSTPGVGGRAEQTPRYTLGLLQTPHSSESSGASSNRGARPGG
SSGEDLAAGRAAGTSAAKPAVSERGESYFGDKSSCVENANTLNLTSSSSVQGLNSTRIGK
TPLSSGRSGCRSHTPLIGYSVTSSSAVSAHSVGSVIVAVVEGRGLARGEVGMASIDLKNP
EMILSQFADNTTYAKVITKLKILTPLEIIMSNTACDVGNTTKLFSLVTEHFKNVTFTTVQ
RKYFNETKGLEYIEQLCASEFSTIFMEVQSKYYCLAAAAALLKYVEFIQNAVYAPKSLKV
RFQGSEKTAMIDSSSAQNLELVINNRDSRNGHTLLGVLNYTKTPGGSRRLRSNILEPPVD
AETINTRLDCVQELLQDEELFFGLQAVISKFLDTEQLLSVLVQIPKQDTVKTAESKITNL
IYLKHTLELVEPLKAALRSCNTQLLKAYYSSLEDTRFGIILEKITSVINDDTRYTKGCLN
MRTQKCYAVKPNINEFLDIARRTYTEIVDDIAGMITQLAEKYSLPMKTSFSSARGFFIQM
NADCSTLPNGQFPSEFTKITKIKNTYSFTSADLIKMNERCQESLREIYHMTYLIVCKLLN
EIYEHIHCLYKLSDIVSMLDMLLSFAHACTLSDYVRPEFTDTLAIKQGWHPILEKIAMEK
PVSNNTYLTEGNNFVIITGPNMSGKSTYLKQIALCQIMAQIGSYVPAEYCSFRIAEQIFT
RIGMDDDIETNASTFMKEMKEITYIIQNANDKSLIIIDELGRGTSAEEGIGICYAACEYL
LNLKAFTLFATHFLELCHIDALYPNVENYHFEVQHVRSSAGNKEKIAYSYTLSKGYTEEK
NYGKGFHCDLQLGKVTQDIIFVIRHLAVFFLMTGFS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgggggcggggtggtgaccacctcggattcttacacaggccgcggctcttcc
acgcccggtgtgggcgggcgggcggagcagacgccccgctacaccctggggcttctgcag
acgccgcacagctcagagagctctggggcctcctccaaccgcggggcacggccgggcggc
tccagcggggaagacctcgcagccggccgtgctgccggaaccagcgcggcgaagccggcg
gtttccgaaaggggagaatcctattttggggacaaaagttcttgtgtagaaaatgctaac
actttgaatctcactagttcttcttctgtgcaaggcctgaatagtacacgtataggaaaa
acacctctctcttctggtagatctggctgcagaagccatacccctcttataggatattca
gttacatcctcctctgcagtttctgctcattctgttggatcagttattgtagctgtagta
gaaggaagaggacttgccagaggtgaagtaggaatggccagtatagatttaaaaaatccc
gagatgatattatcacaatttgcagacaatacaacttatgccaaggttattactaaactc
aagattttaacaccactagaaataataatgtcaaacactgcttgtgatgtggggaataca
acaaaattgttcagtctggtaacagagcatttcaagaatgtgacttttacaactgtccag
agaaaatacttcaatgaaacgaagggtttggagtacatagaacaactgtgtgcatctgaa
tttagcaccattttcatggaagtccaatcaaagtattactgtctcgcagctgctgcagct
ttgctaaaatatgttgaatttattcaaaacgccgtttatgctcctaaatcactcaaggtg
cgtttccaggggagtgagaaaacagctatgatagattcatcatcagcacaaaatcttgaa
ctagtgattaataacagagattctcggaatggtcacacacttcttggtgttttaaattac
actaaaactcccggtggaagtcgaagacttaggtccaatatcctggaacctccagttgat
gctgaaacaattaacacacgactggactgtgttcaggaattactccaggatgaggagctc
ttttttggtcttcaagcagttatctcaaaattcctggatacagaacaactactttcagtt
ttggtacagattccaaagcaggatacagttaaaactgctgaatcaaaaataactaattta
atctacctgaaacataccttagaacttgtggaacctctgaaagctgctttaagaagctgt
aacacacagctgctaaaggcttattacagttctcttgaagataccaggtttggaattata
cttgaaaagattacaagtgtaatcaatgatgatacaagatacacaaaaggatgtttgaat
atgaggacccagaagtgctacgctgttaagcctaacatcaatgagttccttgacatagcc
cgtagaacatacacggaaattgttgatgacatagcaggtatgataacacaacttgcagaa
aagtacagtctgccaatgaaaacaagtttcagctctgctcgtggattttttatccagatg
aatgctgattgttcaacattacctaatggccagtttccttcagaatttacaaagatcacg
aaaattaaaaacacgtacagcttcacttcagcagatttaataaaaatgaatgaaagatgt
caggagtccctgagagaaatatatcacatgacctacttaatagtgtgtaaactactgaat
gagatctatgaacacattcattgcctgtacaagttgtctgacattgtgtctatgctggat
atgctgctttcatttgcccatgcctgcactctttccgattatgttcgtccagaatttact
gatactttagcaatcaagcagggatggcatcccattcttgaaaagatagctatggaaaaa
cctgtatctaacaacacgtacctgacagagggcaacaattttgtcattattacaggacca
aacatgagtggaaagtcaacatacctgaaacagattgctctctgtcaaattatggcacag
attggttcttatgtcccagcagagtattgttcttttcgaattgcagagcagatttttacc
agaataggtatggatgatgatattgaaacaaatgcatcaacattcatgaaggaaatgaaa
gagataacgtacatcatacaaaatgctaatgataagtcactcatcattatcgacgagctt
ggcagaggtaccagtgccgaagaaggtattggcatttgttatgctgcctgtgaatatctg
ttgaacttaaaggcatttacactgtttgctacacatttcctggaactatgtcatatagat
gctttatatcccaatgtggaaaactaccattttgaagtgcaacatgtgagaagcagtgct
ggaaataaggagaaaattgcttactcttacacactttctaaaggatatacagaggaaaag
aactatggtaagggattccattgtgacttacagttgggaaaagttacacaagatattatt
tttgtcattaggcatttagcagtattttttctgatgacaggtttctcttga
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