Oenanthe melanoleuca (Eastern black-eared wheatear): 130254613
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Entry
130254613 CDS
T09236
Symbol
PPIF
Name
(RefSeq) LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase F, mitochondrial
KO
K09565
peptidyl-prolyl isomerase F (cyclophilin D) [EC:
5.2.1.8
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
130254613 (PPIF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
oma03110
]
130254613 (PPIF)
Enzymes [BR:
oma01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
130254613 (PPIF)
Chaperones and folding catalysts [BR:
oma03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
130254613 (PPIF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
130254613
NCBI-ProteinID:
XP_056350301
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Position
6:complement(11561987..11570200)
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AA seq
205 aa
AA seq
DB search
MLALSAARRLLRPPGDLLPPPGLACLWAAGARGCSGAGAGSPNPVVYLDVGADNQPLGRV
VLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQGGDFTNHNGTGGKSIYG
SRFPDENFILKHVGPGVLSMANAGPNTNGSQFFICTAKTXLVDGKHVVFGHVKEGMDVVK
KIESFGSKSGKPSKKIVITDCGQLS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgctgagcgccgcccgccgcctgcttcgcccgcccggggacctgctgccgccg
ccggggctcgcctgcctgtgggcggccggtgcccgcggctgcagcggggccggcgccggc
tcgccaaaccccgtggtgtacttggacgtgggcgccgacaaccagccgctgggacgcgtc
gtgctggagctgaaagctgacgtggtcccaaagacagcagaaaacttcagggctctttgt
actggtgagaaaggatttgggtacaaaggatccacttttcacagagtgattccttcgttt
atgtgccagggtggtgacttcacaaaccataatggaaccggtggaaaatccatttacggc
agtagatttccagatgaaaatttcattcttaagcatgtaggacctggtgttctttcaatg
gccaatgcaggacccaacacaaatggatcccagttcttcatttgcactgcaaaaacatga
ctggtagatggaaagcacgtggtttttgggcatgtaaaggaaggaatggatgtagtgaaa
aaaatcgagagctttggttccaagagtggaaagccctccaaaaagattgtcattactgac
tgtggccagctgtcctaa
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