Oenanthe melanoleuca (Eastern black-eared wheatear): 130254637
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Entry
130254637 CDS
T09236
Symbol
TRUB1
Name
(RefSeq) pseudouridylate synthase TRUB1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oma03016
]
130254637 (TRUB1)
Enzymes [BR:
oma01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
130254637 (TRUB1)
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
130254637 (TRUB1)
Prokaryotic type
130254637 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Pus10_C
Motif
Other DBs
NCBI-GeneID:
130254637
NCBI-ProteinID:
XP_056350346
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Position
6:27543741..27575609
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AA seq
285 aa
AA seq
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MAGEAGGAALGRAADKLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTNGKKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLAGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKGDLENVLQKFTGDIMQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLDVECGGGFYVRSLVNDIGKELSTCATVQELTRTKQGPFTLEEHAL
QEDKWTIDEIAQSLEHCTALLLGEPARKKLKTEHPGETAVICGDK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgctgccgacaagctcttctcgctc
agcgggctcttcgccgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaatgggaagaaaagaaatcag
gttttgaaaattggacatggaggaactttggacagtgcagccacgggagttctggtggtt
ggtattggaaaaggaacaaaaatgctgggaactatgttggcaggttccaagaagtacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaagccttatgaccaggtaacaaaaggagatcttgaaaatgttctgcaaaagttcaca
ggggacatcatgcaagttcccccactctattctgctttgaagaaggatggagaaaggctt
tcaactctgatgaagagaggggaagctgtggaagcaaagcctgctcggccagtgagagtg
tacagcctttctctgcagcagttccagccaccactgttcacactggatgttgaatgtggt
ggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctccacctgtgcc
acggtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggagcacgccctg
caggaagacaagtggacaattgatgaaattgctcagtccttggagcactgcacagccctg
ctcctgggagagccagctcggaaaaaattgaagacagagcatcctggtgaaactgctgtg
atctgtggggataagtga
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