Oenanthe melanoleuca (Eastern black-eared wheatear): 130254656
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Entry
130254656 CDS
T09236
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130254656 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130254656 (TAF5)
03036 Chromosome and associated proteins [BR:
oma03036
]
130254656 (TAF5)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130254656 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
130254656 (TAF5)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
130254656 (TAF5)
STAGA complex
130254656 (TAF5)
TFTC complex
130254656 (TAF5)
SAGA complex
130254656 (TAF5)
SLIK complex
130254656 (TAF5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_TEP1_C
DSE1_N
Beta-prop_Aladin
PAC11
Beta-prop_SCAP
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_WDR41
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
ASA1
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_NOL10_N
Beta-prop_Nup120_160
Tricorn_2nd
PEP5_VPS11_N
CDK5RAP3
Beta-prop_ACSF4
RAB3GAP2_N
eIF2A
VID27
Motif
Other DBs
NCBI-GeneID:
130254656
NCBI-ProteinID:
XP_056350402
LinkDB
All DBs
Position
6:23097745..23108036
Genome browser
AA seq
784 aa
AA seq
DB search
MAALHEEPAEVAAVQPDPDAGTPPPPPPAVPPAPAPAAAPATTAEGEVAGGGGDAASAKP
AAPGPAASPSALDRQTLVAVLQFLRRSNLRESEEILRREARLLGDDLGAAALSPASAGLL
GGSGSDADSGDALLGRGTGAAAVAIGGNVATVATSSPGVAAVAAVPPGKVGGAVVVEDQP
DVSAVLSAYNQQGDPTLYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQH
ESEAKSFFERFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQL
LKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGL
LKEPEFDVPLDDEDEEGENEEGKPKKKKPKKDNVGSKSKKQDPNAPPQNRIPLPELKDSD
KLDKVMNMKEAARRVRLGPECLPSICFYTFLNAYQGLTAVDITDDSSMIVGGFADSTVRV
WSVTPKKLRSVKTAADLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGTSFSPDRN
YLLSCSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDH
YQPLRIFAGHLADVTCTRFHPNSNYIATGSADRTIRLWDVLNGNCVRIFTGHKGPIHSLA
FSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVYALRFSRDGEILASGSMDNTVR
LWDAVKAFEDLETDDFTTATGHINLPENSQDLLLGTYMTKSTPVVHLHFTRRNLLLAAGA
YSSQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgcatgaggagccggcggaggtggcggcggtgcagccggaccccgacgcg
gggacgccgccgccgccgccgcccgcggtgcctcccgcccccgctcccgccgcggccccg
gccaccacggcagagggagaggtggcgggaggcggtggggatgcggcatccgcgaagccc
gcggcgcctggcccggctgcctccccgtcggcattggaccggcagacgcttgtggctgtg
ctgcagttcctgcggcgcagcaacctccgcgagtccgaggagatcctacgtcgcgaagcc
cgcctgctcggagatgacctgggtgccgccgccctcagccccgccagcgccgggctcctg
gggggctccggcagcgacgcggactccggcgacgcgttgctcggccggggcaccggcgct
gccgccgtcgccataggaggcaacgtcgccactgtcgcgacttccagccccggggtggct
gcagttgccgccgtgccgccggggaaagtcggaggcgcggtggttgtggaggatcagccg
gacgtgagcgcggtgctgtcggcctacaaccagcaaggggaccccacgctgtacgaggag
tactacagcggcttgaagcacttcatcgagtgctccctggactgtcatcgggcagaactg
tctcagctcttttatcctctcttcgtgcacatgtacttggaattggtctacaatcaacat
gagagtgaggcaaagtctttttttgaaagatttcatggggatcaggagtgctattaccag
gatgacctgcgtgtattgtcgagtttaaccaaaaaagaacatatgaaaggtaatgagacc
atgctggatttccgaacaagcaagtttgtgctgcgcatttcccgtgactcttaccagctc
ctgaagaggcatcttcaggaaaagcagaacaatcagatctggaacattgttcaggagcat
ctttacattgatatctttgatggaatgcctcgcagtaaacaacagatagatgctatggtt
ggaagcttggctggggaggcaaaacgagaggctaataaagcaaaggttttcttcggctta
ttgaaagaaccagaatttgatgtgcctttggatgatgaagatgaagaaggagaaaatgag
gaaggaaaaccaaagaagaaaaaacctaaaaaagataatgtagggtcaaaaagtaaaaaa
caagaccctaatgctcctccccaaaacagaattcctctgccagaactgaaagactctgac
aagctggataaagtaatgaatatgaaggaagctgcgaggcgagtgcgtcttggaccagag
tgcttgccctccatctgtttctacacattccttaatgcttaccagggtctgactgcagtg
gatattacagatgactccagcatgattgtaggaggctttgctgactctactgtcagagtg
tggtctgtgactccaaaaaagctacgtagtgtgaaaacagctgcagacctcagtctcatt
gacaaggaatctgatgatgtcttggagaggatcatggatgagaaaacagcaagtgagttg
aagattttatatggtcacagtggacctgtctatggcaccagcttcagtcctgataggaac
tatctgttgtcctgttctgaggatggcaccgtgagattgtggagtctccaaacattcacg
tgtttggtgggatataaaggacacaattatccagtttgggatacacagttctctccttat
ggttattactttgtgtctgggggacacgacagagtggctcgtctgtgggcaacagatcac
taccagccactacggatctttgctggccatcttgcagatgtgacgtgtacccgatttcat
ccaaactccaactatattgctacaggctcagcagatagaactataaggctctgggatgtt
ttgaatgggaattgtgtaagaatattcactggacataagggaccaattcattcattggca
ttttctcctaacggacgattcctggctactggagcaacagatggaagagttctgctgtgg
gatattggacacggcttgatggttggcgaattgaaagggcacactgacactgtctacgcg
ctcagattcagtagggatggggagattttagcatcaggttcaatggataacacagttcgc
ctgtgggatgctgtgaaggcatttgaagatttagaaactgatgactttactacagccact
ggacacataaacttgcctgaaaactcacaggacttgctactgggcacatacatgaccaaa
tcaacccctgttgttcatctccatttcacacgcaggaacctgctgctggctgcgggtgcc
tacagctcacagtag
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