Oenanthe melanoleuca (Eastern black-eared wheatear): 130254732
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Entry
130254732 CDS
T09236
Symbol
LCOR
Name
(RefSeq) ligand-dependent corepressor isoform X1
KO
K26260
ligand-dependent corepressor
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130254732 (LCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130254732 (LCOR)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
130254732 (LCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4553
Motif
Other DBs
NCBI-GeneID:
130254732
NCBI-ProteinID:
XP_056350617
LinkDB
All DBs
Position
6:complement(21644870..21735771)
Genome browser
AA seq
1853 aa
AA seq
DB search
MASPCGRQQCSIQRRGVRHQLDSWRHKLIHCVGFESILEGLFGPGLLKDLSLFKDCEPEG
VSDWSFDENCLFCCLRREKVKEHLVSLDEPASEAGQEALLRQEQAKIIRFERQAEEFLNA
VFYRKDSPRVSDPNIPLVAREIMQRMIRQFAAEYTSKNSSTQDSSQPNSTKNQSLLKASL
VASSPTAATAQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSL
SHSAGCSSTSGNGEDAAETIAIDSNNQPKSPLEKFMVRLCTHHQKQFIRVLNDIYTEVQP
DSDGQQLAESESMEASTCGSGCSQRSTENQDKGATCTESKLPSTLDPGESGADGPLQVMG
QALKQPVELKSLDRAENSSPTLRRDFCELPITRLRSASPKDSPTQGYLSTLNSSSLNFHH
ATKSLEGQQAAGHEQETGIRKCEDNKEQLAGKTLMEGYISVKVANVNGSEDSLDSCLGSQ
KGSFRALPEESWDPGFAVTPPRRADKENTLQCSSKASLHQDLDAKEQDVRPKQENHLHAM
AKGKAGCQLHAADKGVLDKPKEGWLPTSAVPAAHRTPGGHPRAKAASLRSSRKSKKASGL
RINDYDNQCDVVYISQPITECHFEPQRLVSPRRTARKSTRGYYFNGECCELPTVRTLVKS
SRPEERASSPALRTDTLAAAKPPLVLSVEGSAGAGREGEKRVSLRLLAKVAPASREMKER
AELGSMQLRDTRALRSREDAVAMPFFSLSAPPSPQKEDSLASSPPPGSPPAEGEGMTVGG
AVTWEAGSSLGSSGDGSSSRQAADISAFSVSKAHGEEDGCPGSDIQTIPDLPASPEPKSS
SQPSTATDTTPPPCDSASDPAQLPDSGDAELCGQCLAEPSPRSPGSQTPDEPSATMDGES
PLEPPATMDGESPLEPPATVDGGSPLEPPVTTDGESPLEPPATVDGESPLEPPATVDGES
PLEPPVTMDGESPLEPPATVDGESPLEPPATVDGESPLEPPATTDGESPLEPPATLQCED
VNKSVGAKPEAKSSVVVGDSPLEQEDAVLVSTPLPKILEVEAMQNNSTEGDKEPTEGEMP
PDAKSSDSVSSKDSLDKKRKKGRRPLVASDRCLRSQQSQPPAEGSAEDSGSSSSVQLPCL
QIKLSKSPGAKRFKREVQLDEAASMHVPNDCFPDMLLKTSEGPGIGQAPESITEQQPGEE
NGVTTRQTYKSILAKETAAEGENSFKDDSSANSSQSQPGEMLEIGIQADSEKNILLPPEA
SVPANDAEQEDVKPVNASAKERSDSARDLGKPVNYELVTNLPVCPSSRGGSKHLPAKTAK
HKKVALQFYNLRHAPAPVDSAKKSTPGKESMQAIPKLRDEHSSGKDDCATLEDTDMADSK
PKFMEWCAEEENQELIAEFNTQYMKIQKGWIQLEKEVQPAPKVKNKADKLKEIWKSKKRT
RKSRGSLEVQKLSPVQMLFMKAFKLSDICQWFLETTETRSLVIVKKLNTRLPGEIPPMKV
PMQKYSSSGLYPSSLQAERLKKHLKKFAATTPARNNLKNQKLWAKIRENADKAEAEEAST
PNQTSPTDASTKELSEDKTIQPALSLPTQASTRILRKYSNLRGKLRAQQRVVKAEKRSDG
PGDHPALESKQSRKSVCINPLMSPKLALQIKAAAFPAKSPSVDGTGKGRKGKSRSQEDPL
PKVDLQLSKKKKMLKESGSTQERSSSSTKDKLPAKKASKIKHSEVSTKSPATRKQTAMER
SNKLARKMSLKEKRVPKKQLEKMRLPMRKGKENTSRRAVLPPSHEELSKPPKQKPLGESS
TRSQKMANKKHSSGKTLTRSMKKMQENSVSQGKRKLRAKVDCSHSKRSRLDPK
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccgtgcgggcggcagcagtgctccatccagaggcgcggcgtccgccaccag
ctcgattcgtggcgacacaagctcattcactgtgtagggtttgaaagtattctagaaggc
ctgtttggacctggattattaaaagatctcagtttgtttaaagactgtgagcctgaaggt
gtttctgattggtcttttgatgaaaattgtcttttctgctgcctgagaagagaaaaagtg
aaggaacacttagtcagtctggatgagccagcctcggaagctggacaagaagctctgctt
agacaagagcaagcaaaaatcattcgttttgaaaggcaagcggaagagttcctcaatgca
gtcttttacagaaaagacagtcctagggtctctgaccccaatattcccctagtggcccgt
gagatcatgcagcgaatgatccgacagtttgctgctgaatatacctcaaaaaatagctct
actcaggactccagccagcccaatagcacaaagaaccaaagcctgctgaaagcatctctg
gtcgcctcctctcccacggctgcaactgctcagaaccctgtgctcagcaaactgctcatg
gctgaccaagactcacctctggaccttactgtcagaaagtctcagtcagaacctagtgaa
caagacggtgtgcttgatttatccactaagaagagtccttgtgctggcagcacctctctg
agtcactctgctgggtgctccagtacttcgggaaatggtgaggacgcagcagagacaata
gcaatagactctaacaatcaaccgaagtctccactggaaaaatttatggtcagactgtgt
acacatcaccagaagcagttcattcgtgtgctaaacgacatatacactgaagtacagcca
gactctgacggccagcagttagctgaatctgagagcatggaggcctctacttgtggctct
ggttgtagccagcgaagcactgaaaatcaggataagggtgctacttgtactgaatcaaag
ctcccttctacattggacccaggagagtcaggggctgatggccccctgcaggttatggga
caagccctgaagcagccagtggaactgaagtctctggacagagcagagaactccagtcct
actttgagaagggacttctgtgagctccccatcaccaggcttcgctctgctagtccaaag
gatagccccacccaaggatacctcagcacgttgaactcttcctctttgaatttccatcat
gccacaaagagcctggaagggcagcaagctgctggacacgaacaagaaactggtatcagg
aagtgtgaggataataaagagcagctagcaggtaagactctcatggaaggttatatctca
gtcaaagtggcaaatgtgaatggcagcgaggacagcttagacagctgtctggggtcccaa
aagggctctttcagggctctcccagaggagtcctgggatcctggctttgcagtgaccccc
cctcgcagagccgacaaagagaacactttgcaatgcagctctaaagcatctttgcaccaa
gacttagacgcaaaagaacaagatgtgagaccaaagcaagaaaaccacctgcatgccatg
gccaagggcaaggcaggctgccagctgcacgcagctgacaagggcgtgctggacaagccc
aaagagggctggctgcccaccagcgccgtgccagccgcccaccggacccccggcgggcac
ccccgcgccaaggcagcctccctccgatcctctcggaagagcaagaaggcgtcggggctg
aggatcaacgactatgacaaccagtgcgacgtggtgtacatcagccagcccatcaccgag
tgccacttcgagccgcagcggctggtgtcgccgcgcaggacagcgaggaagagcacccgc
gggtactacttcaacggggagtgctgcgagctgcccaccgtccgcacgctggtcaagagc
tcccgcccggaggagagggcgagcagcccggctctgcggacagacaccctcgcggctgcg
aagccacccctggtgctctcggtggagggatctgcaggggcaggacgggagggtgagaag
agggtttccctgaggctcctggctaaagtggcaccagccagtcgagaaatgaaagagaga
gctgagctgggctccatgcagctccgggatacccgagcactgcgatcaagagaagatgcc
gtggccatgccgttcttctccctctctgctccacccagcccccagaaagaggacagcttg
gccagctcaccgccacctggctcccctcctgctgaaggggaggggatgacagtaggaggt
gctgtcacctgggaggctggcagtagtctgggctcctctggggatggcagtagcagcagg
caggctgctgatatttctgccttttcagtctcaaaagcacatggtgaggaggacggttgt
ccaggctctgacatacaaactattccagacctccctgccagcccagagccaaagtcctcc
tcacagccctctaccgctacagacacaacacctccgccctgtgatagtgccagtgatcct
gcccagcttccagactcaggggatgccgagctctgtgggcagtgtctggcagagccttcc
ccacgctctccaggctcacagactcctgatgagccctctgccaccatggatggggagagc
cccttggagccccctgctaccatggatggggagagccccctggagccccctgccaccgtg
gatggagggagccccctggagccccctgtcaccacggatggggagagccccctggagccc
cctgccaccgtggatggggagagccccctggagccccctgccaccgtggatggggagagc
cccctggagccccctgtcaccatggatggggagagccccctggagccccctgccaccgtg
gatggggagagccccctggagccccctgccaccgtggatggggagagccccctggagccc
cctgccaccacggatggggagagccccctggagccccctgccactttgcagtgtgaggat
gtgaacaaaagcgtcggtgcaaaaccagaagccaaatcatcggtcgtggtgggtgacagc
cctcttgagcaagaggatgctgtgctcgtcagcacacccctccccaaaatcttggaagtg
gaggcaatgcagaataatagcacagaaggtgataaagagcccactgaaggggaaatgcca
cctgacgcaaaaagctcagactctgtctcttccaaagacagtctagacaagaagcgaaag
aaaggcaggagaccactggtggcatcagaccggtgtctccgaagccaacaatcccagcca
cctgccgagggcagtgctgaggactctggttcttccagctctgtgcagcttccttgcctt
cagatcaaactctccaagagccctggtgctaagcggttcaagagagaagtgcagctggat
gaggcagcatccatgcatgtcccaaatgactgcttccctgatatgctgctcaaaaccagc
gaagggccaggcattggccaggctccagagagcatcactgagcagcagccaggcgaggag
aatggtgtcactaccagacaaacctataaaagcatcttagcaaaagagactgctgcagag
ggagaaaattcctttaaagatgactcctctgctaacagcagccaaagtcagccgggtgag
atgctggaaatcggcatccaggctgattctgagaaaaacattctcctccctccagaggcc
agtgttcctgcaaatgatgctgagcaagaggatgtgaaaccagtcaatgccagtgcaaag
gagaggtctgacagtgctagggatctgggcaagccagtgaactatgagctggtgaccaat
ttgcctgtgtgtcccagcagcagaggtggaagcaagcatcttccagcaaaaactgcaaag
cataaaaaggttgctctgcagttttataacttacgacatgcacccgcacctgtagacagt
gcaaaaaagagcacaccagggaaggagtctatgcaagcaatccccaaactgagggatgaa
cacagttcagggaaagatgactgcgcaacactggaggacacagatatggctgacagcaaa
ccaaagttcatggagtggtgtgctgaagaggagaaccaggagctcattgctgagttcaac
actcaatacatgaaaatccagaagggctggattcagctggagaaggaggtccagccagcc
cccaaggtaaagaacaaagctgacaaactgaaagagatttggaaaagcaagaaaagaaca
cggaaaagcagaggctcattggaagtacagaagctttctcctgtgcagatgctgtttatg
aaggcctttaagctgtctgacatatgccagtggtttctggagacaactgaaaccaggtct
ctagtgattgtgaagaaactcaacacccgtctcccaggggagattccccccatgaaagtc
cccatgcagaaatattcttcctctggtctctaccccagctcactacaagctgaacgtttg
aagaaacatctcaagaagttcgccgccactaccccggctcggaataacctgaagaaccaa
aagctttgggccaaaattcgtgagaatgctgataaagcagaggctgaagaagccagcact
cccaaccagacatctcccacagatgccagcaccaaggagctgagtgaagacaaaaccatc
cagcctgccctgagcttgcccacgcaggccagcaccaggatcctgcgcaagtactccaac
cttcggggcaagctgcgagcccagcagcgcgtggtgaaggcagagaagcggagcgatggc
ccaggggaccacccagccctggagagcaagcagagccggaagagtgtgtgcatcaacccc
ctgatgtctccaaagctggccttgcagatcaaagcagctgcctttcctgctaaatccccc
tcagtggatggaacggggaaggggaggaaggggaagagcaggtcccaagaggaccccttg
cccaaagtcgacctccagctcagcaagaagaagaagatgctgaaggagagcgggagcacc
caggagcgatccagctcctccaccaaggacaagctgcctgccaagaaggctagtaaaata
aagcattcggaggtcagcacgaaatctcccgccacccgaaagcagactgccatggagagg
agcaataaactggccagaaaaatgtctttgaaagagaagagagtcccgaaaaagcagctg
gagaagatgcggctccccatgcggaagggcaaggaaaacacgagccgacgggccgtgctg
cctcccagccatgaggagctgtccaagcccccaaagcagaagcccctgggggagtcctcc
acacggtcacagaagatggccaacaagaagcacagcagtgggaagaccctgacaaggtcc
atgaagaagatgcaggagaacagtgtgtctcagggcaagaggaagctgagggcaaaagtg
gactgttctcacagcaaacgctcacgactggacccgaaatag
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