Oenanthe melanoleuca (Eastern black-eared wheatear): 130255673
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Entry
130255673 CDS
T09236
Symbol
IFIH1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04622
RIG-I-like receptor signaling pathway
oma05164
Influenza A
oma05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
130255673 (IFIH1)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
130255673 (IFIH1)
05168 Herpes simplex virus 1 infection
130255673 (IFIH1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oma04054
]
130255673 (IFIH1)
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130255673 (IFIH1)
Pattern recognition receptors [BR:
oma04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
130255673 (IFIH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
CARD_2
RIG-I_C
ResIII
DEAD
Helicase_C
CARD
SWI2_SNF2
DUF3638
Motif
Other DBs
NCBI-GeneID:
130255673
NCBI-ProteinID:
XP_056352601
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All DBs
Position
7:20537290..20562042
Genome browser
AA seq
1008 aa
AA seq
DB search
MAEGTRDERFLYMISCFRPRLKQFIQVQPVLDRLPSLSAEDRDRVRAAAEQRGAAAGAEE
LLRALERGPRGCGWGREFLQALEQGGCGLAACYANPSLSLLPSPAEEAEHDLCVQLVQLL
HGTLVDRMRALQVAGKCLEMGVFQDEDMDRIQTVTDNRGNRDGARELLSRIVQKKDWFSS
FLVALRETQHEDLACDLSGNTGGTENKQNGMEQTADEETEVTSQPGYAMEQNLKQEENVD
DSFSSESSVLETSIEKNSVVSESDVSTGDGSVSNLNESLGQSSTTSDSDEDEEERRASPE
PDLTLRDYQMEVAKPALNGENIIICLPTGSGKTRVAVYITKDHLNKKKRASEPGKVIVLV
NKVPLVEQHLQREFSPFLKRWYRVTGLSGDSQLKISFPEVVRRNDVIISTAQILENSLLN
ASKEEEESVHLSDFSLIIIDECHHTQKEGVYNNIMRRYLKEKMRNRKLAKENKPLIPQPQ
ILGLTASPGVGGATSYSKAEQHILKICANLDASRIMTVEEHASQLKNQVKEPSKKTVIAD
DKKRDPFKERIIEIMTEIQNYCQLHPKSEFGTQTYEQWAIREERRAAKEEKRRERVCAEH
LKKYNDALQINDTIRMVDAYNHLNNFYKEEKSKKTVRSDDDDDDEPAVSKQDETDEFLLD
LFYAKKKQLKEMTGKPENENEKLIKLRNTLMEEFTKTEEPRGIIFTKTRLSAFALFQWIK
DNPKFEEVGIRAHYLIGSGHKSEMKPMTQNEQREVIDKFRHGNINLLIATTVAEEGLDIK
ECNIVIRYGLVTNEIAMVQARGRARSDESTYALVASSGSGAVEREDVNIYREKMMYKAIQ
RVQKMPQEEYLNKIQNFQLQSIVEKQMKAKRDQCKTYKKNPSLIKFLCKNCYKPICSGED
IQVIEDMHHISVKKDFQSLYHTRENKTLQDKHADYQTNGEIICRDCGQTWGNMMIHRGLD
LPCLKIKNFVVVFADKKTTKQIFQRWGELPIRFPSFDYAAHFPSSDED
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggcacccgggacgagcggttcctctacatgatctcgtgcttcaggccgcgg
ctgaagcagttcatccaggtgcagcccgtgctggaccggctgccctcgctgagcgccgag
gacagggacagggtgcgggcggccgccgagcagcgcggcgcggcggcgggcgcggaggag
ctgctgcgggccctggagcgcgggccccgcggctgcggctggggccgcgagttcctgcag
gcgctggagcagggcggctgcggcctggccgcctgctacgccaaccccagcctgagcctg
ctgccctcgcccgccgaggaggccgagcacgacctgtgcgtgcagctggtgcagctgctg
cacggcacgctggtggacaggatgcgcgccctgcaggtggccgggaagtgcctggagatg
ggagtcttccaggacgaggacatggatcggatccagactgttactgacaatcgtggcaac
agagatggtgcaagggagctactgagcagaatagtccagaagaaagattggttctcttct
tttttggttgctctccgtgaaacccaacatgaagacctcgcatgtgatttaagtggaaat
acaggaggaacagagaataaacaaaatgggatggagcagactgcagatgaagaaacagaa
gttacaagtcaaccaggatatgccatggagcagaatttgaaacaggaagaaaatgtggat
gatagtttcagcagtgagagcagtgtgttggaaacatccatagaaaagaattctgtggtg
tcagagtcagatgtctccacaggagatggaagtgtcagtaacttgaatgaaagcctggga
cagagctccacaaccagtgattcagatgaagatgaagaggagaggagagcctcacctgag
ccggatctgaccctgagagattaccagatggaagttgcaaagccagcactgaatggagag
aatattataatatgtctccctacgggcagtggtaaaactagagtggctgtttacattacc
aaagatcacttgaataagaagaaaagagcatcagagcctggaaaagtcatagtacttgtt
aataaggttccattggtagaacagcatttacaaagagagtttagtccattcctgaagcgt
tggtatcgggttactggtttaagtggtgattctcagctgaaaatctcatttcctgaagtt
gtcagaagaaatgatgtcatcatcagtacagcacagatccttgagaattcactgttaaat
gcatccaaggaagaggaagaaagtgtccacttatcagatttttccctgatcattattgat
gagtgtcatcacactcaaaaggaaggtgtctacaacaatataatgcgacggtacttaaaa
gaaaagatgaggaacaggaagctggcaaaagaaaacaaaccactgatcccacagcctcag
attctgggacttacagcctcacctggtgtaggaggtgcaacatcctactcaaaagctgaa
cagcatattctcaagatctgtgccaatcttgatgcatctagaattatgactgttgaagag
catgcctcccagctaaagaatcaggtgaaggaaccatctaagaagactgtgattgcagat
gacaaaaaaagggatccatttaaagagagaattattgagatcatgacagaaatacaaaac
tattgccagctacatccaaagtctgagtttggaactcagacatacgaacagtgggcgatc
agagaagagagaagagctgcaaaagaagaaaaacgcagggaacgtgtctgtgcagagcac
ttgaagaaatacaatgatgctctccagataaatgacaccatccgaatggtggatgcctac
aatcacctaaataacttttataaagaggagaaaagtaagaagacagtaaggagtgatgat
gatgatgatgatgaaccagcagtatcaaaacaggatgaaacagatgaatttctattagat
ttattttatgcaaaaaagaaacagctgaaagagatgactggaaagccagaaaatgaaaat
gagaagctaataaagttgagaaacactttaatggaggagttcacaaagactgaggaacct
cgaggaatcattttcacaaagactcgtctaagtgcctttgctctattccagtggattaag
gacaacccaaaatttgaagaagtggggattagggcccattatcttattggctctggacac
aagagtgaaatgaagcccatgactcagaatgagcaaagggaagttattgataaatttcga
catggaaatataaatttactaattgctactactgtagctgaggaaggcctggacatcaaa
gagtgcaacatagttattcgctatggcctcgtcaccaatgaaattgctatggtgcaggct
cgcggtagagctcggtctgatgaaagtacctatgctcttgtggcttcaagtggctcaggg
gctgttgaacgtgaagatgttaatatttatcgtgagaaaatgatgtacaaggccattcag
cgtgtccagaagatgccgcaggaagagtatttaaataagattcagaatttccagttgcaa
agtatagtggaaaaacaaatgaaggcaaagagagatcagtgcaagacatacaagaaaaat
ccttcactaataaaattcttatgcaaaaattgctacaagccgatatgttctggagaagac
atacaagttattgaagacatgcatcatatcagtgtgaaaaaagatttccaaagtctttat
catacaagagaaaataaaacactgcaagataagcatgctgattaccagacaaatggggaa
attatatgcagagactgtggacaaacttggggaaatatgatgattcaccgaggtcttgac
ctgccttgcctaaagattaaaaattttgtggttgtgtttgcagacaagaaaacaacaaag
caaatttttcagagatggggggagctgcccatcaggttccctagttttgattatgcagct
cattttccttcaagtgatgaagattga
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