Oenanthe melanoleuca (Eastern black-eared wheatear): 130255681
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Entry
130255681 CDS
T09236
Symbol
XRCC5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130255681 (XRCC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130255681 (XRCC5)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
130255681 (XRCC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
POPDC1-3
Motif
Other DBs
NCBI-GeneID:
130255681
NCBI-ProteinID:
XP_056352614
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Position
7:complement(23232242..23281470)
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AA seq
727 aa
AA seq
DB search
MAPSGKVAIVLCLDVGLTMSSSSPGGESSLDQAKKIMTKFVQRQVFAESKDEVAVVLFGT
DGTSNGLASEDQYQNITVHRSLQLPDFDLLEDIQDVIKAGSEQADFLDAIIVCMDLLQKQ
TIGKKYEKRHIELFTDLNSPVSEDQLGIIIANLKKTGISLQFFLPFPVSVGDGIGDPSAS
VHAHMHRDIFPKKCLTEQQKQGIDVVRKLMYTLDEEGGLEEIYTFRESLERLSMFKKMER
KPIPWPCQLTIGPNLSIRIVAYKSVTEEKVKKLWAIVDGKTLRKEDVQKETVYCLNDDDE
TEVQKDDTIQGFRYGSDIVPFSKEDEEQMKYKTEGKCFSVLGFTRSSQIQRHYYMGSQAL
KVFAAKDDENAAVAFSALVRALDELKVVAVVRYAYDRRCNPQVGVAFPYIKDAYECLIYV
QLPYMEDLRQYVFSSLKNSKKCIPTADQLSAVDSLIDSMNLVREDGETFEDLFKPSKIPN
PHFQRLYQCLQHKAFHPDKPLPPIEQHLLEMLEMPCVVRERCQAPLERVKALFPLKEVGK
KKEEKTAQDIFKDNEDEPSLKKPKIEDEEGSFSIMKLAEGSITSVGSVNPAEDFRILVRK
KNADFKDVSQQLINRIDQFLENKGSQYYMKGVDCIRVFREEAMKLSKVQCFNDFLQALKS
KLEDKALSDFWEIMVQDRISLITKDEAEESLVTGEEAEKFLAPKEQKTETLPPTDEGGDV
DDLLDMM
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagcggcaaggtggcaatagtgctgtgcctggatgtaggccttacaatgagc
agctcttcccctggtggagagtcttcacttgaccaagccaagaagattatgacaaagttt
gtgcagcgtcaggtttttgctgagagtaaagatgaagtcgctgtagttttgtttggcact
gatggcactagcaatggccttgccagtgaggatcaataccaaaacattactgtacacagg
tcactacagctgccagattttgatttgctggaagacattcaagatgtgattaaagcaggc
tctgaacaagcagactttttggatgccattattgtgtgtatggacttgcttcagaagcaa
acaataggaaagaaatatgagaagagacacattgaactgtttacagaccttaatagtcct
gtcagtgaggatcagctgggaattatcattgctaacttgaaaaaaaccggaatttcactt
cagttttttctgccatttccagtgagtgttggtgatggaattggagatccaagtgccagt
gtacatgctcatatgcacagagacatttttccaaaaaagtgtttaactgaacaacaaaag
caaggtattgatgtggtgaggaaactcatgtatactttggatgaagaaggagggctggaa
gaaatttatactttcagagagagcctggaacgtctttcaatgtttaagaaaatggaaaga
aagcctattccttggccctgtcagctcactattggtcctaatttgtctataagaattgtg
gcctacaaatcggtcacagaagagaaggtgaagaaactttgggcaattgtggatggcaaa
accctcagaaaagaggatgtgcaaaaagaaactgtttactgtttgaatgatgatgatgag
acagaagttcagaaagatgatactattcaaggttttcggtatgggagtgatatagttcct
ttttccaaggaagatgaagagcaaatgaaatacaaaacagaaggaaagtgtttttctgtt
ttgggattcactagatcctcccagatccagaggcattactacatgggctctcaggctctg
aaggtctttgcagcaaaagatgatgagaatgcagcagttgctttttctgcgcttgttcgt
gcattggatgagttgaaagtggtggctgtggtgcgctatgcttatgatagaagatgcaac
ccacaagttggagtagctttcccgtatattaaagatgcatatgagtgtctcatctatgtg
caactaccctatatggaagacctaagacaatatgtattttcatcgttgaaaaacagtaaa
aaatgcattcctacagcggatcagttatctgctgttgactcactgattgattctatgaat
ttggttcgtgaagatggagaaacttttgaggacctgtttaagcccagcaaaattccaaac
cctcattttcagaggttgtatcagtgtttgcagcacaaggcttttcaccccgataagcca
ctgcctccaatagagcagcaccttttagaaatgctggagatgccttgtgtggtaagagaa
aggtgtcaggctcctctggaaagagtaaaagcacttttccccctgaaggaagttggaaag
aaaaaagaagagaagactgcacaagacatcttcaaagacaacgaagatgaacccagcctt
aagaaaccaaaaattgaagacgaggaagggagctttagcattatgaaacttgctgaaggc
agtatcacctctgtaggcagtgttaacccagcagaagatttccgaattctggtgaggaag
aaaaatgctgacttcaaagatgtgagtcagcagttgataaaccgcattgatcagttcttg
gaaaataaaggctcacagtactacatgaaaggggtcgactgtatcagagtttttagagag
gaggccatgaagctgtccaaggtgcagtgctttaatgactttctacaagccttgaaatca
aagttggaagataaagccttatctgatttctgggagatcatggtacaagacagaatctct
ttgatcactaaagatgaagcggaggaaagtttggtgacaggtgaagaggctgagaagttc
ttagctccaaaagaacagaagactgaaactctgcctcctacagatgaaggtggtgatgtt
gatgatctgctggacatgatgtga
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