Oenanthe melanoleuca (Eastern black-eared wheatear): 130255965
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Entry
130255965 CDS
T09236
Symbol
PATJ
Name
(RefSeq) inaD-like protein isoform X1
KO
K06092
InaD-like protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130255965 (PATJ)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
L27_2
MPDZ_u10
DUF6604
Motif
Other DBs
NCBI-GeneID:
130255965
NCBI-ProteinID:
XP_056353050
LinkDB
All DBs
Position
8:complement(2265485..2399469)
Genome browser
AA seq
1838 aa
AA seq
DB search
MPENPAADKQQVLQILDRLQAKLQEKRDSQHQENLAVLRNTLRSPLFNQILTLQQSIKQL
KEQLNYMPPDRSVDFDFTKRGLLVFADKSVTAGTPCTSPGPRASAFTPNLGVNEFNMIIQ
KMAKGRQIESITIDKPSVGGLGFSVVALKNPSLGEVGIFVKEVQPGSIADRDQRLRENDH
ILAINCTPLDQSISHQHAIALLQQSTGSLHLVVAREPLQGNSRTALFSDVNPPETIHWGH
IEDVELINDGSGLGFGIVGGKSSGVVVRTIVPGGLADRDGRLQTGDHILQIGGTNVQGMT
SEQVAQVLRNCGNSVRMVVARDPKCEVVEAPPAPLSWPVSTLPPLQNGNDNDNFFDIYDV
ELIKKNGQSLGITIVGYAGTYDIEPSGIFVKNIIPGSAADHNGQIHVHDKIVAVDGVNIQ
NFSNQEVVEALRNTGQTVRLTLLRRKPSFTVPSETPSDRGRVPLPAAHELKSKWENLLGP
EYEVMVVNVDMPFKDDSELQKYSKLLPIHTLRLGVELDTFDGHHYISSIASDGPAAILGI
LQLEDELLEVNGVQLCGKSRREAVTFLKEVPPPFTLVCCRRLCGDGTESLVDEPPVAPAP
PEHKVKPEEDFNPEEEEGELALWSPDVKVIELEKDKNGLGFSILDYQDPLDPAGTAIVIS
SLVAGGVAERGGQILPGDRLVFVNEKHLDTATLAEAVEVLKSVPPGTVSLGICKPLVGEG
REEENMHGVDPSSIKSSPGSPEPVDNNNFSVILEAPQGFRDEVPFKEELVDEPHLDLGRS
FQLSQKDDESGKESWEMCEFLKPGAEHEEEEREMLVDEEYEEDPDFLKCGEKAASDRSLD
TERWAKQLETAEIQDLSSSASPSPKESLEYPFSKDQMCEENAAIRSQFSGTTAYSNYQKD
IFDTETTQSEVKTEMDLGTKFQSDSEGPELAVDSEAIGKEALKEENYVLPKSQGSGRVTT
LAQPRTAPGSELPEREEGEGEETPNFSHWGPPRTVEIFRDPHVSLGISIVGGQTVIKRLK
NGEELKGIFIKQVLEDSPAGRTRALKTGDKILEVSGVDLRNATHEEAVEAIKNAGNPVVF
VVQGLANVPKVVSPAQPKGIRVSKDQDADKENKSDKRKYGAPPPMKLPPPYRALESHQAE
EAAVDEEEDEDACAEEKIRQRYADLPGELHIIELEKDKNGLGLSLAGNKDRSRMSIFVVG
INPEGPAGRDGRMHIGDELLEINNQILYGRSHQNASAIIKTAPSKVKLVFIRSEDAVNQM
AVTPFPLPAGSHSAIEDHGGTEPASGEEDPSLEVVMKSLTDEESNKADVKCKADTPVVAD
QQDPEEQLPENVLNQLKQPKSSTKALVSSQDLALEPAAPYLSPEAEVSSRGVFPAPLPVD
PATCPIVPGQEMTIEISKGRSGLGLSIVGGKDTPLDAIVIHEVYEEGAAARDGRLWAGDQ
ILEVNGIDLRSASHEEAITALRQTPQKVQLVVYRNEAHYKDEENLEVFSVEIQKKTGRGL
GLSIAGKRNGSGVFISDIVKGGAADLDGRLIQGDQILSVNGEDMRNASQETVATILKCAQ
GLVHLELGRLRAGSWLSSRKTSQNSQASQQSVHSHFHPALAPVLSTLQSFVSTKRTSADT
SQRNSAGADMGPRTVEITRGPNDALGVSIAGGKGSPLGDIPIFIAMIQASGVAARTQRLR
VGDRIVSINGQPLDGLSHADAVNLLKNAYGSIILQVVADTNISAIASQLESMSPGCSLSP
PEHPCEEPEAPQPKIITLEKGSDGLGFSIVGGYGSPHGDLPIYVKTIFAKGAAADDGRLK
RGDQIVAVNGEALEGVTHEQAVAILKRQRGMVTLTVLS
NT seq
5517 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaatccagcagcagataagcagcaggtgctgcagatcctagatcggctgcag
gcaaaactgcaggagaaaagggattcccagcaccaggaaaacctggctgtcctacggaac
accctcaggagccccttgttcaaccagatcctgactctccagcaatccatcaagcagctg
aaggaacaactcaattacatgcctcctgaccgctcggtggattttgattttaccaagagg
gggctgttggtgtttgctgacaaatcagtcactgctgggacaccctgcacttcacctgga
cccagagcatcagccttcactccaaacctgggagttaatgaatttaacatgatcatccag
aaaatggcaaagggaagacaaatagaatcaataacgattgataaaccttctgttggaggc
cttggatttagtgtggttgcccttaaaaatcccagcctgggagaagttggtatctttgtc
aaggaagtccagccaggaagcatagctgacagggatcaaagactgagggaaaatgaccac
atactggccattaattgcacgccattggatcagagcatttcccatcagcacgccattgcc
ctcctccagcaatccacaggatccctgcatctggtggtagctcgggagccacttcaaggg
aacagcagaactgccttattcagtgatgtaaatccacctgagactattcactggggccac
attgaagacgttgagctgattaacgatggttcaggattaggctttggaattgtaggagga
aagtcgagcggagtagttgtaagaacaattgttcctgggggattagcagatcgggatggg
aggctgcagacaggggatcacatcctgcagattggagggaccaacgtgcaagggatgacc
agtgagcaggttgcccaggtgctgaggaactgtgggaattctgtcaggatggtcgttgcg
agggaccccaagtgtgaagtcgtggaggctccaccagctcccctgagctggccagtcagc
acattacctccccttcaaaatggaaatgataatgacaacttttttgatatctatgacgtt
gaacttataaaaaagaatgggcaaagcctgggaataacaattgttggatatgctggcaca
tatgatatagaaccctcagggatttttgtgaaaaatataatacctggtagtgctgctgac
cacaatggccaaattcatgttcatgacaaaattgttgctgttgatggagtcaacatacag
aattttagcaaccaagaagtggtagaggcactgcgaaacacgggacagactgtacgtctc
accttgcttagaaggaagccttcctttactgttccttcagaaacaccttcagatagagga
agagtcccactccctgcagcacatgagctgaaatccaagtgggaaaacctgctgggacca
gaatacgaagttatggttgtgaatgtggatatgccctttaaggacgattcagagctccag
aagtactcaaagctgttacccatccatactctgagattaggagttgagctggacactttt
gatggacatcattacatctcatccattgcttcagatggcccagctgcaatccttggtatt
ctgcagctggaggatgaactgctggaggtgaacggggtgcagctgtgtgggaagtcccgg
cgtgaggctgtcaccttcctgaaggaagtgcccccccccttcaccctggtgtgctgccgg
cgcctctgcggggacggcaccgagtctctggtggacgagccccccgtggctcctgcccct
ccagagcacaaggtgaaacccgaggaagattttaatcctgaggaggaagaaggggaattg
gcattatggtctcctgatgtgaaggttattgagctggagaaagacaaaaatggtttagga
ttcagcattttagactatcaggatcccttggacccagcaggcacagccattgtgatcagc
tccctggtggcaggtggagtggccgagcgcggggggcagattttgccgggtgaccgcttg
gtgttcgtcaatgagaagcacctggacactgccaccttggcagaggcagtggaagtgctg
aaatctgtgcccccaggtacagtttcccttggaatctgcaagcctttggtgggagaaggc
agagaggaggagaacatgcacggtgtggatcccagcagcatcaagagcagccctgggtct
ccagaaccagtagataacaacaatttctcagtaatacttgaagcaccacagggtttcaga
gatgaggtgcctttcaaagaagagctcgttgatgagccccatttggacttgggaaggtca
ttccagctttcccagaaggatgatgagtctgggaaggagtcctgggagatgtgtgaattc
ctgaaacccggagcagagcacgaggaggaggaacgggaaatgttggtggatgaggagtat
gaggaggatccagacttcctgaaatgtggggagaaggcagcttcagacaggagcctggac
acagaacgatgggcaaagcaactggagactgcagaaatacaagatttaagctccagtgct
agcccaagtcccaaagagtccctggaatatccattcagtaaagatcagatgtgtgaagag
aatgctgctataaggtcacagttttctggaaccacagcatacagcaactaccaaaaagac
atatttgacactgaaactacccagtcagaagtgaaaactgagatggatttagggaccaag
tttcagagtgactctgaaggacctgagcttgctgttgattcagaagcaattggaaaggaa
gcactaaaggaggagaattatgtgcttcccaagagccagggatctgggagagtaaccacc
ttagctcagcctagaacagcaccaggcagtgaattacctgagagagaagaaggagaagga
gaagagactccaaacttcagccactggggaccaccacggactgttgagatcttcagagac
cctcacgtgtctcttggaatcagcattgttggtggacaaactgtcataaagcgcctgaag
aatggagaagaacttaaagggatctttatcaaacaagttttggaagacagcccagcagga
agaacaagggctttaaaaactggagataaaatacttgaggtttctggggtagacctacgg
aatgccacccacgaggaagcagtggaagccatcaagaatgcaggaaatcctgtggtgttt
gtagtccagggcttggctaatgtaccaaaagtggtttctcctgcccagcctaagggaatc
agagtcagcaaagatcaggatgcagacaaagaaaataagagtgataagagaaaatatggg
gctccacctcccatgaagctgccacctccttacagagccctcgaaagtcatcaggcagag
gaggctgctgtggatgaagaggaggatgaggatgcttgtgcagaggaaaaaatcaggcag
agatatgcagatctcccaggagaattgcacattattgagctggagaaagacaagaatggg
ctggggctgagcctggctggcaacaaggaccgctccaggatgagcatcttcgtggttggg
atcaaccccgagggccccgcgggacgggacgggcggatgcacatcggggatgagctgctg
gagataaacaatcagatcttgtatggaagaagccaccagaatgcttctgcaatcattaaa
actgccccatccaaggtcaagctggttttcatacgaagtgaagatgcagtcaaccagatg
gctgtcactcccttcccactgcctgcaggctcccactctgctattgaggaccatggtggc
actgaacctgcaagtggtgaggaagacccaagtttggaagttgtcatgaaaagcctgact
gatgaagaatccaacaaagctgatgtgaaatgtaaagctgacacaccagtggtggcagat
caacaggatccagaggagcagctcccagaaaatgtcctcaaccagctcaaacagcccaaa
tcttccacaaaagccctggtgagctcccaggatttagccctggagccagcagctccttac
ctttctccagaggcagaagtctccagccgtggtgtcttcccagctccactgcctgtggat
ccagcaacctgtcccatagttccagggcaggagatgaccatagagatctccaagggtcgc
tcagggctcgggctcagcatcgtcgggggcaaagacaccccactggatgccatagtgatc
catgaagtttatgaagaaggggcagcagcccgagatggcagactttgggctggtgatcag
attctggaggtgaacgggatcgacctgcgcagcgccagccacgaggaggccatcactgcc
ctcaggcagacaccccagaaggtgcagctggtggtctacaggaatgaagcacactacaag
gatgaggagaacttggaggtgttctctgtagaaatccaaaagaaaacgggccgaggattg
gggctcagcatagctgggaaacgaaatggaagtggagtgtttatctctgacattgttaaa
ggaggagctgcagacctagatggaagattaattcaaggagatcagattttgtctgtaaat
ggggaggatatgagaaatgcctcacaagagactgttgccactatacttaagtgtgctcaa
ggcctggtgcatcttgagcttgggagattgagagctgggtcatggctgtcatcaaggaaa
acatcccaaaacagtcaggcaagccagcagagtgtccacagccacttccaccctgctctt
gctcctgtcctctccaccttgcagagctttgtcagcacaaaaagaacctcagcagacaca
tcccagagaaactcagcaggagctgatatgggcccaaggactgtggagataacaaggggc
ccaaatgatgcactgggtgtgagcattgcaggagggaagggcagtcccctgggagacatt
cccatcttcattgcaatgatccaggccagtggagtggctgctcggacacaaaggctcaga
gttggagatcggattgtcagcattaatgggcaacctttggatgggctgtctcatgcagat
gcagttaatctactaaagaatgcttatgggagcattatcctgcaggtggtggctgacacc
aacatcagtgccattgccagccagctggagagcatgtccccaggctgcagcctgagccca
cctgagcatccctgcgaggagcccgaagcacctcaacctaagattattactttggagaaa
ggctctgatggactgggatttagtattgtaggggggtatggaagtccccatggagacctg
cccatttatgtcaagactatatttgccaagggagcagcagccgacgacgggcggctgaag
cgcggggaccagatcgtggctgtcaacggggaggcgctggaaggagtgacccacgagcag
gctgtggccatcctgaagcgccagaggggcatggtcaccctgacagtgctgtcctga
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integrated database retrieval system
