Oenanthe melanoleuca (Eastern black-eared wheatear): 130255967
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Entry
130255967 CDS
T09236
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
KO
K11101
patched 2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130255967 (PTCH2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
130255967
NCBI-ProteinID:
XP_056353056
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All DBs
Position
8:complement(17831147..17852424)
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AA seq
1429 aa
AA seq
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MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRRTHSPPSAPAPARPRRAHGGRRRP
RPHITGVRSPASRPAMPAEPPRAAPPPLRAARRKPLPEGRAVGQRTPLWLRARFQALLFA
LGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKLGE
ESVYTSQMLIQTPKKDGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSGVP
IIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEELG
QFTSLEGFKELLDKAEVGQAYMERPCLDPLDPQCPSSAPNKQSQQSPDIPAELSGGCHGF
SRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWSEE
KAGAILEAWQRKFVELAQDSIPANATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLLML
AYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLALGI
GVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVALTSVSNMIAFFMAALVPIPALRA
FSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQELAD
ANDNHACHPSPYGHPGVATSTQITTTVQAFTRCDPSGHHVVTVLPPTSQVCTSPAVLLPH
TDPLGSQVFTPSSSTRDLLSQLDEAKSGRECVPLPFCRWSLADFAREKYAPLLLRTRTKV
VVVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKGGF
HYPGAQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRITH
DSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWASND
PLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVEAI
ESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFLVCALLLLNP
WTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAAGS
RNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGLVL
LPVLLSVIGPPPEASLVDNGPCLPPPESVPPCLGPGGLYVRCAPAWPATFPEPSDTEHYT
ESVGPGSPRGPFIVPPAPAHILLEAGKDPSFPRITVLKPYKDSLEVQGKKEASGPQPAAP
LPFGEPCTTVPREHPQPGAPGPRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALHPT
LPGSYPTFSPEGFASSERDCLDEPSTSGTAVPNAFEMQNMAHHGAGARR
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccngcctcccctttagaggcgcggcgggcggccggcggcgcacacacagc
cctccatccgcaccggcaccggcacggccccgccgcgcgcatgggggccgccgccgccct
cggccccacataacgggggtgcgcagccccgccagccgccccgccatgccggccgagccc
ccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccgctgcccgagggcagg
gccgtgggccagaggaccccgctgtggctgcgggcccgctttcaggcgctgctcttcgcc
ctgggttgccggatccagcggcactgcgggaaggtgctgttcgtggggctgctggtgttc
ggggcgctggccgtgggactacgggtggcctccatcgagaccgacatcgagcacctctgg
gtggaagcgggcagccgggtgagccaggagctgcgctacaccaaggagaagttgggcgag
gaatccgtctacacgtcccagatgttgatccagaccccgaagaaggatggcgataacatc
ctgacgcaggaggccctgcagctccacctcgaggcggccctggctgccagcaaggttcaa
gtctcactgtacggaaaatcgtgggatttgaacaagatctgctacaagtcgggtgtcccc
atcattgagaatggcatgatcgagcggatgatagagaagctgttcccctgtgtgatcctg
acaccgctggactgcttctgggaaggctccaagctgcagggaggctcagcctatctcccg
ggccgcccggacatccagtggagcaacctggatcctctgcagctcatggaggagctgggg
cagttcacatccctggaaggcttcaaagagctgctagacaaggcagaggtgggacaggct
tacatggagcggccttgcctggaccccctcgacccccaatgtccctccagtgcccccaac
aagcagagccagcagagccccgacatcccggccgaactctcggggggctgccacggcttc
tccaggaagttcatgcgctggcagcaggagctgatcttaggtggcacgaccaaagactcc
cagggcaagctgctacgcgccgaggccctgcagaccatgttcctcctcatgagcccccgg
cagctctatgagcacttcaaggatgactacgagatccatgatatcagctggagtgaggag
aaggcaggagccatcctggaggcttggcagaggaaattcgtggagctggcacaggactcc
atccctgccaacgccacacagagtgtccatgctttctccaccaccacactcaatgacatc
atgaagtccttctctgacgtcagtgtcatccgtgtggctgggggctacctcctcatgctg
gcctacgcctgtgtcaccatgctgcggtgggactgctccaagtctcaaggggctgtgggc
ctggctggggtcctgcttgtggctctctccgtcgcctctggcctggggctttgctcactg
ctgggcatctccttcaatgcagccaccacccaggtcctgcccttcctggccctcggcatt
ggagtcgatgacatgttcctcttggctcatgccttcaccgagacgagccagcacatcccc
ttcaaggagcggacgggggagtgtctgaagcgcacagggaccagtgtggctctcacctct
gtcagcaacatgatcgccttcttcatggcagccctggtgcccatccctgccctgcgtgcc
ttctccctccaggctgcagtggtcgttgtgttcaacttcgccatggtgctctttgttttc
cctgctatcctgagcctggacctgcaccgccgggagaaacgccggctcgacatcctctgc
tgcttctacagtccctgctcctcacgggtcatccagatccagccccaagagcttgctgat
gccaacgacaaccatgcctgccacccttctccttatgggcaccccggcgtggccaccagc
acccagatcaccaccactgtccaagccttcacccggtgtgacccctcgggccaccacgtt
gtcaccgtcctgccacccacctcccaggtgtgcacctcacctgccgtgctcctgccccac
actgaccccttgggctctcaggtcttcaccccatcgagctccacccgggatctgctgtcc
cagctggatgaggccaagagtgggagggagtgtgtccccctgcccttctgccgctggagc
ctcgctgatttcgcccgggagaagtacgccccactccttctgcgcacccggaccaaggtg
gtagtggtggtgctgttcctggcactgctggggctgagcctctatggcaccaccatggta
catgatggcctctacctgacggacattgtgccacgggacaccaaggcacacgccttcatc
tcggcccagttcaagtacttctccttctacaacatgttcattgtcactaagggtggcttc
cactacccgggtgcccaggctgccctgctgagcctgcaccaggccttcagcaccgtcaag
tacgtggtgcgggagggcaaccgcgacctgcctaaaatgtggctccattacttccaggac
tggctgcgagggctccaggccaccttcgacagggactggcaggctgggcgcatcacccat
gacagctaccgcaatggctccgaggatggggcactggcctacaaactcctcatccagacg
ggcaacaagaaggagcccttcaactttaatcagctgaccacgcggcgactggtggatgag
aatggcatcatcccccccgacaccttctacatctgcctgacggtgtgggccagcaatgac
cccctgggcttcgccgcctcccaggccaacttctaccccccaccccccgagtggattcat
gacaagtacgacaccacgggcgagaacctgcgaatcccagcagcccagccgctggagttc
gcccagttccccttctacctgagcgggctgcgtcgcacatctgactttgtggaggcgatt
gagagcgtacgagccatctgccgggaggctgcccagcgccacggcgtgctcagctacccc
agtggctaccccttcctcttctgggagcagtacattggcctgaggcactggttcctgctg
gccatcagcatccttctggcctgcaccttcctcgtctgtgccttgctgctgctcaacccc
tggaccgccggcatcatcgtctccatcctggccatgatggctgtggaattgtttggcatc
atggggctgatgggcatcaagctgagcgccatccctgtggtcatcctcattgcctcggtg
ggcatcggtgtggagtttactgtccacgtggccctgggcttcctgacagctgcggggagc
aggaacgtgcgctcagccgcagcactggagcacacttttgcccctgtgatggatggtgct
gtctccaccctcctgggtgtcctcatgctggctggctctgagtttgatttcatcatgagg
tatttctttgcggtgctgaccatcctgacgctgctggggctgctcaatgggctggtgctg
ctgcccgtcctgctctctgtcattgggccaccccctgaggcatccctggtggataatggc
ccctgcctaccgccaccagagtcggtacccccatgcctgggccccgggggactgtacgtc
cggtgcgccccagcctggcctgccaccttccctgagccctctgacacggagcactacacg
gagagtgtggggccaggcagcccacggggacctttcattgtgccccctgccccagcacac
atcctactggaggctggcaaggaccccagcttcccccgcatcactgtgctgaagccctac
aaagacagcctggaggttcaggggaagaaagaagcttctggccctcagcctgcagcccct
ctgccctttggggagccgtgcaccacagtgccccgagagcacccacagcccggcgcaccg
ggcccccggccagcgccccccgcagccctgcccacctacagcacccacctgcagggtcct
gccggcagctacaccacggtcacggccaccgcctcagtgacagtggccctgcaccccaca
ctgcctggctcctaccccaccttcagccctgagggcttcgccagcagcgagcgggactgc
ctggatgagcccagcaccagcggcaccgctgtgcccaacgccttcgagatgcagaacatg
gcacaccacggggcgggtgcccggcgctag
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