Oenanthe melanoleuca (Eastern black-eared wheatear): 130256135
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Entry
130256135 CDS
T09236
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oma03032
]
130256135 (PIF1)
03029 Mitochondrial biogenesis [BR:
oma03029
]
130256135 (PIF1)
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
130256135 (PIF1)
DNA replication proteins [BR:
oma03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
130256135 (PIF1)
Mitochondrial biogenesis [BR:
oma03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
130256135 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
UvrD_C_2
Herpes_Helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
130256135
NCBI-ProteinID:
XP_056353460
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All DBs
Position
8:complement(16431531..16439502)
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AA seq
633 aa
AA seq
DB search
MEAAELRCTAAVEQPLPGGLAPRRRVMRDATVLLGRNELRQPVLRVAGGSGAAAAVLSFV
LAGDAVRLFTRFAGEGRAAVRVGPDGAQVLLSDCPPDALRRFLRLLRLKVAAGPRDAPRP
PRLLERPPPSFSVISPLQERDVLCGPGRRRAGSERGESPAQVPRAERERRPPARLSAEQE
AVLGAVRSGKSIFFTGSAGEEPRPLSSAPRGKPWPLTCCFFLEGTGKSFLLKRIVGSLPP
NITYATASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAERPGVRQHWLACQHLIIDE
ISMVDGKFFDKLEAVARAVRKRDEPFGGIQLIICGDFLQLPPVCKANEETKFCFQAKSWR
KCIHINMELTEVRRQTDKTFVSLLSAIRLGRCTEEVTRLLMQTAAHRSERDGILATRLCT
HKDDVEITNERRLQQLPGEVHVFEALDSDPMLVKLIDAQCPVGGRVELKLGAQVMLAKNL
DVSQGLVNGARGVVVGFESEQKGLPKVRFLCGVTQLIKMEKWIIKGPSGIHLSRQQLPLK
LAWAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLAGLRVLDFDPKVVRADPAV
LQFYRQLRRHQLPRQDSLHTHSDVDEKENWKCN
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggagctgcgctgcacggcggccgtggagcagccgctgccgggggggctc
gccccgcgccgccgcgtgatgcgggacgcgaccgtgctgctgggccgcaacgagctgcgg
cagcccgtgctgcgggtggccggcggcagcggcgcggcggcggcggtgctgagcttcgtg
ctggccggtgacgccgtgaggctcttcacgcggttcgcgggcgaggggcgggcggcggtg
cgggtggggccggacggcgcccaggtgctgctgtccgactgccccccggacgcgctgcgc
cgcttcctccgcctcctgcggctcaaggtggcggccgggccgcgggacgcgccgcgcccc
ccgcgcctgctggagcggccgccgccgtccttctcggtcatcagcccgctgcaggagcgg
gacgtgctgtgcgggcccggccgccgccgcgccggctcggagcgcggggagagcccggcc
caggtgccccgagcggagagggagaggcggcccccggcgaggctctcggcggagcaggag
gcggtgctgggcgccgtgcggagcgggaagagcatcttcttcaccggctctgcaggtgag
gagccccggccactctcatcggctccccgcggaaagccctggccactaacctgttgcttc
ttcctcgaagggactgggaagtcgttcctgctgaagaggatcgtgggctccctccctccg
aacatcacctacgctacggccagcacgggcgtggcggcttgtcacatcggtggcactact
ctccatgcctttgcagggatcggctctgggaaggcaccgctggagcagtgcattcagctg
gcagagcggccgggggtgcgccagcattggctggcctgccagcacttaattattgatgag
atctcaatggtggatggcaagttctttgacaagctggaggcagtggcaagggcagtcaga
aaacgggatgagccttttggaggaattcagctaattatctgtggggatttcttacagcta
cccccagtctgcaaggctaatgaagaaaccaagttctgcttccaggcaaaaagctggaga
aaatgcatccacataaacatggagctgactgaagtgcggagacagactgacaagaccttt
gtctcactcctcagtgcaatccgtttaggcaggtgcacagaggaagttaccagactgctg
atgcagacggctgctcacaggtctgagcgtgatgggatcctggctacgaggctctgcacc
cataaagatgatgtagaaataaccaatgagagacgcttgcaacagctgccaggagaagtg
cacgtgtttgaggctttggacagtgacccaatgctagtgaagttaattgatgctcagtgt
cctgtgggtggtagagttgagctaaagctcggagctcaggtgatgttagcaaagaatctg
gatgtgtctcaggggctggtgaatggagcacgaggtgttgttgtagggtttgaaagtgaa
cagaagggactgcctaaggtgaggtttctctgtggggtcacacagctcataaaaatggaa
aaatggatcatcaaaggaccatcaggaattcacctgagtcgtcagcaattacctttaaaa
ttggcatgggccatttccattcacaagagtcagggcatgtctttggactgtgtggagatc
tccctgtctcgtgtctttgagagtgggcaggcttacgtagccctgtcccgagcccggagc
ctcgcagggctccgtgttctggactttgacccaaaagtagtgagagctgatcctgctgtg
ctgcagttctacagacagctgagacgccatcagcttccaagacaggattcactacacacc
cattcagatgttgatgagaaggagaactggaaatgcaactga
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