Oenanthe melanoleuca (Eastern black-eared wheatear): 130256205
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Entry
130256205 CDS
T09236
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130256205 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oma03021
]
130256205 (GTF2B)
Transcription machinery [BR:
oma03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
130256205 (GTF2B)
Prokaryotic type
Archaeal type
TFB
130256205 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
130256205
NCBI-ProteinID:
XP_056353616
LinkDB
All DBs
Position
8:12182353..12210099
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AA seq
316 aa
AA seq
DB search
MASTSRLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNDKA
TKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMMNAFKE
ITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATHIARKAV
ELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIYPRAPDLF
PADFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccagccgtttggatgtacttccgagggtgacttgcccaaatcatccagat
tccattttagtggaggattaccgagctggtgatatgatttgttctgagtgtgggctagta
gtaggtgaccgggtcatagacgtggggtcagagtggagaacgttcagcaatgacaaagca
accaaagacccatctcgagttggggatacccagaatccgttgctgagtgatggcgacttg
agtacgatgattggcaagggcacaggtgcagcaagttttgatgaatttgggaattcgaag
taccaaaatcgcagaactatgagcagctctgatcgtgcgatgatgaatgcttttaaagag
attacgaacatggcagacagaatcaacctccctagaaatatagttgatcgaacaaataat
ttattcaagcaagtgtatgagcaaaagagcctgaaggggagaagtaatgatgctattgct
tctgcttgtctctacatagcctgtaggcaagagggtgttccaagaacatttaaagaaata
tgtgcagtgtccaggatttcaaagaaagaaataggccggtgttttaaacttattttgaaa
gctctggaaaccagtgttgatttgattacaactggagacttcatgtcacgattctgttct
aatctgggtcttcccaaacaagtgcaaatggcagcaacacacattgcccgtaaagctgtg
gaattggatttggttcctgggagaagccctatctctgtagcagctgcagctatttatatg
gcatcacaagcttcttcagagaaaaggacacaaaaagaaattggtgatattgctggtgtg
gctgatgttacgattagacagtcatacaggctgatctatcctcgagctccagatcttttc
ccagcagacttcaagtttgataccccagtagacaagctaccacagctgtga
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