Oenanthe melanoleuca (Eastern black-eared wheatear): 130256354
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Entry
130256354 CDS
T09236
Symbol
IFT88
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oma03037
]
130256354 (IFT88)
Cilium and associated proteins [BR:
oma03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
130256354 (IFT88)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_12
TPR_7
TPR_19
TPR_14
TPR_8
TPR_16
TPR_6
CFAP70_TPR_C
ANAPC3
TPR_11
RMD1-3
TPR_10
ARM_TT21_4th
TPR_17
TPR_9
TPR_CcmH_CycH
DUF6340
TPR-S
CNOT10_TPR
ARM_TT21_5th
TPR_15
ARM_TT21_C
TPR_YpiA_C
TPR_21
CFAP70_mid_TPR
DUF2989
HAT_PRP39_C
TTC22_N
TPR_Psidin_N
NBD_SMAX1
NatA_aux_su
DUF6584
RMD9_mid
ARM_TT21_2nd
Coatomer_E
Nab2
Motif
Other DBs
NCBI-GeneID:
130256354
NCBI-ProteinID:
XP_056353892
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All DBs
Position
1:43075678..43116457
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AA seq
815 aa
AA seq
DB search
MMQNVHLAPENNEDDLYSGYNDYNPMFDTEDLENDVAFQQAARTSHGRRPPVTAKIPGTS
SPRPLATGFGSKATLTSSMGRPMTGAIQDGVSRPMTAVQAAGYTKAAVRGSSFDPLGQAK
GPASPLEKKTSDSLEEKMRQLEKKVNDLVEESCVANSCGDLKLALDRAKEAGRQERELLR
QREQITPPESINLDLTYTVLLNLASQYVANEMYAEALTTYQVIVKNKMFSNGGILKVNMG
NIYLKQRNYSKAIKFYRMALDQITSSHKQMRIKIMENIGIAFIKTGQYVDAISSFEEIMS
ISPNLKAGFNLILCYFAVGNGEQMKKAFKNLIEVPLEVDYEEKYISLNEDLHTNLLIEAI
KNDSLSQVERERKSLAEEYIMTAAKLIAPAIETSFAVGYDWCVDAVKASHYVELANDLEI
NKATTYLRQQNFNQALETLKMFEKKDSRVKSAAATNLSFLYYLGNELEQATNYADLAVNS
DRYNPAALTNKGNTVFANGDYEKAAEFYKEALRNDSLCTEALYNLGLVYKKLNRIDEALD
CFLKLHAILPNSAQVLYQLSSIYQIMEDPNQAIEWLLQLISVVPTDPHVLSKLGNLYDTE
GDKSQAFHYYCESYRYFPSNIEVIEWLGAYYIDTQFCEKAIEYFERAALILPTQVKWQLM
VASCYRRSGNYQKALEKYKVIHRKFPENVECLRFLVRLCTDMGLKEVQEYITKLKKAEKL
KEIREQRVKSGRDGSARSRREGSDTGGTKGERLSAKLKALPGTSEPYESSSNKEIDASYA
DPLGPQPERPKTAARKRTEEDDFADEELGEDLLPE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcatctggctcctgagaataatgaagatgatctctattctggctac
aatgattataatcccatgtttgacacagaggatttagaaaatgatgtagcttttcaacag
gcagcaagaacaagtcatggaaggagaccccctgtgacagccaaaattcctggtacatca
agtccaagacctctagctactggatttgggtcaaaggcaactttaacttcatccatggga
agacccatgacaggagctatacaggatggggtttctcgaccaatgacagcagtgcaagct
gcaggttacactaaagcagctgtgagaggttcttcgtttgatcctcttggccaagcaaaa
ggtcctgcttcacctctggaaaagaaaacttcagacagtttagaagagaagatgaggcag
ttggaaaaaaaagtgaatgatttggttgaagaaagttgtgttgccaatagctgtggagac
ttgaaattggctctggacagggcaaaagaggctggaagacaggaaagagaattgttgaga
cagcgtgaacaaatcactcctccagaaagcatcaacttagacctcacttacacagttctc
ctcaatctggccagtcagtatgttgctaatgaaatgtatgctgaagcgctgactacttac
caagttatagtgaagaataagatgttcagcaatggaggtatactgaaggtaaatatggga
aatatatatttaaaacaacggaactattccaaagctatcaaattctaccgtatggctcta
gaccagattactagttctcacaaacagatgaggataaaaataatggagaatattggaatt
gcatttattaaaactggccaatacgttgatgccatttcttcatttgaagaaataatgagc
atatccccaaacctgaaggcaggcttcaacctgatcctctgttactttgctgttggaaat
ggtgagcaaatgaagaaagccttcaaaaacctcattgaagttcccttggaagtggattat
gaagaaaaatacatttccttaaacgaggatctacatacgaatctactgattgaagccatt
aaaaatgacagtttaagtcaagtagaacgtgaaaggaagtccttggcagaggaatacatc
atgacagctgctaaactcattgcaccagcaattgagacatcttttgcagtgggctatgac
tggtgtgttgatgcggtgaaagcttcccactatgtagagttagccaatgatctggaaata
aacaaagccactacctacttgaggcagcagaattttaaccaggcactggagactttgaaa
atgtttgaaaaaaaggatagcagagtaaagagtgcagctgcaacaaacctttcattcctt
tattatttggggaatgaattggaacaagcaactaactatgcagatttagctgtaaattct
gataggtacaatccagcagctctaactaacaaaggaaatactgtttttgcaaatggagac
tatgaaaaagcagctgaattttataaggaagctctcaggaatgattccttatgcactgaa
gcactttataatcttggtttagtttacaagaagttaaacagaatagatgaagctttggat
tgttttctgaagctccatgcaatccttccaaatagtgcccaagtcctttaccagctatca
agcatataccaaatcatggaagatcccaatcaagccatagagtggctgctgcagttgatc
agtgtagtaccaactgatccacatgtgctttcaaagctagggaatttatatgatactgaa
ggtgataaatcccaagcctttcattattactgtgagtcgtaccggtatttcccttccaac
attgaggtcattgaatggcttggagcatattacattgacacccagttctgtgaaaaagcc
attgagtactttgaaagggcagcacttatcctgccaacacaagtgaagtggcagctgatg
gttgccagttgctacaggagaagcggcaactaccaaaaagctctggagaaatacaaagtc
attcacagaaaattcccagagaatgttgaatgcctccgatttttagttcgtctctgcaca
gacatggggctgaaagaagtccaggaatatataacaaagctcaagaaagcagaaaaatta
aaagaaattagagagcagcgcgttaaatctggcagagatggcagtgcacgtagccgcaga
gaaggaagtgatactggtggtaccaaaggggaaagactgagtgccaaactgaaagctctg
cctggaacaagtgaaccctatgaaagtagcagcaataaagaaatagatgcctcctacgca
gacccacttggcccacaaccagaaagaccaaaaacagcagcaagaaaaagaacagaggaa
gatgattttgctgatgaagaactaggagaggatctgcttccagaataa
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