Oenanthe melanoleuca (Eastern black-eared wheatear): 130256540
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Entry
130256540 CDS
T09236
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4 isoform X1
KO
K06675
structural maintenance of chromosome 4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130256540 (SMC4)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
130256540 (SMC4)
Condensin II
130256540 (SMC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
APG6_N
EzrA
ABC_tran
Motif
Other DBs
NCBI-GeneID:
130256540
NCBI-ProteinID:
XP_056354219
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All DBs
Position
9:14130947..14160444
Genome browser
AA seq
1306 aa
AA seq
DB search
MEGEQPAGTVPGKSTKTSRAARGKGRKPLEEPSMEVEEENEGTREPDKEPPQAASDEVVD
NRSLEEILGSIPPPPPPAMASEPGAPRLMITHIVNQNFKSYAGEQTLGPFHKRFSCIIGP
NGSGKSNIIDSLLFVFGYRAQKIRSKKLSVLIHNSDEHQDIQSCSVEVHFQKIIDKEGDD
YEVIPDSKFYVSRTAYRDNSSTYYINGKKKTFRDVGMLLRSHGIDLDHNRFLILQGEVEQ
ISMMKPKGQTEHDEGMLEYLEDLIGSARLKEPIQSLCRRVELLNERRGEKLNRVKMVERE
KDALEEDKNKAIEFLRLENQIFKEKNQLCQYYIYDLKKRINDLEMQKEKINEETKSVNEK
SSKLAEETKSKNKALKELEKKFNKITKFIEENKEKFTQLDLQDVKVRENLKHAKSKAKKL
EKQLQKDKEKVEQLRTVPSSSTKAIEDATAKREQLAKAKDKEEAKLRQVLASLQEETKGI
QKEKEAKEKELLEFSKEVTEARSNMELTRSELELYLSKYNSAVARLSEAQEALDSTSNTL
KERKASIKDIAVKLPQAEQQLREKESALENLKKEESGSKDHVLNLRQKVEEAKSSLAQSR
SRGKVLEALLQQKKCGNIPGIYGRLGDLGAIDDKYDVAISSCCAALDHILVDTIDTAQDC
VNFLKAGDIGVATFIALDKMAVWENKMHKIPTPENIPRLFDLVKVEDPKFRQAFYFALRD
TLVAKTLDEATRIAFQKEKRWRVVTLKGQIIEVSGTMTGGGGKVMKGRMGSSVVIDVSEE
EICKMESQLQRDCQRAAQRQQEKSQLEEDIGKLEQDIQEMKNISEKYTASIKGYSEQEIY
LKNQIKELEANVTAATPDKTKQKELEKALDGYKKDYERAAEKAAEMEEEVKRLHQLIMDT
NNQKLKAQQDKIDKIDKEIDEYSSAITKAQVAARTADRNLKKSEEALQRTEKEVEENEKE
MKNWTAELTTLEEKASEVMKECKEAEEALPAVQEEQKNLLQEMKTIQDAEHALQSEALSI
KLKMEQIDSHISTHQGKVKYWQKEISRLALHAIEGEAPAELRQLSEAELEALQEPDALSK
KIALLEAERHQLRPNLAAIAEYRKKEELYLQHVGELDNITSERDKFREACEGLRKQRLNE
FMAGFNVITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTQNTTKSVATNPKVLAVKGLEELGLPECSVAQK
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atggaaggggagcagccagcagggaccgtgccaggcaagagcaccaaaacctcccgtgca
gcccgtgggaagggcaggaagcccttggaggagccctccatggaggtggaagaggaaaac
gaaggcaccagggagcctgacaaagaacctccccaagcagcctcagatgaggtggtggat
aatcgaagtttagaagagattttgggtagcatccctcctcccccacctccagcaatggcc
agtgaacctggtgctcctcggctcatgatcactcacattgtaaaccagaacttcaaatcc
tatgcaggggagcaaactctgggaccttttcacaagcgtttctcgtgtattatcgggccc
aatggcagtggcaaatccaatatcattgattccctgctttttgtctttggctatcgagcc
caaaaaatccgatccaaaaaactctcggtgctgatccacaattctgacgagcaccaggac
atccagagctgctctgtggaagttcacttccaaaagatcattgacaaggaaggagatgat
tatgaagtcattcctgacagcaaattctatgtctctagaactgcctatagagacaattcc
tctacctactacatcaatggcaagaaaaagacattcagagatgttgggatgcttctccga
agccatggcattgatctggatcataacaggttcttaattttacagggggaggtggagcag
atttccatgatgaagcccaaggggcagacggagcacgacgaggggatgttggaatatctg
gaggatttgatcggctcggcgcggctcaaggagcccatccagagcctgtgccgcagggtg
gagctgctgaacgagcgccggggggagaagctaaatcgagttaaaatggtggagagagaa
aaagatgccttggaagaggacaagaataaagccatagagttccttcgcttggaaaaccaa
atatttaaggaaaagaatcagctctgtcaatattacatctatgacctaaagaaacgaata
aatgacctggaaatgcagaaggagaaaattaatgaagagactaaaagtgttaatgagaaa
agcagtaaacttgcagaggaaacaaaatccaagaataaagctttgaaagaacttgagaag
aaattcaataaaattacaaagttcatagaggaaaacaaagaaaaattcactcagctggat
ttgcaggatgtgaaagtgagggagaatctcaaacatgccaagagcaaggctaaaaaactg
gagaagcagcttcaaaaggacaaggaaaaggtggagcagctgaggaccgtcccctccagc
agcaccaaagccatcgaggacgccacggccaagagggagcagctggccaaggccaaggac
aaggaggaggccaagctcaggcaggtcctggccagcctgcaggaggagaccaagggaatc
cagaaggaaaaagaggccaaggagaaggagctgctggagttcagcaaggaggtgaccgag
gcccgctccaacatggagctgacccggtcagagctggagctgtacctcagcaagtacaac
tctgctgtggctcgcctcagcgaggcccaggaggccctggacagcacctccaacaccctg
aaggagaggaaagcttccatcaaggacattgctgtcaaattaccccaggctgagcagcag
ctcagggagaaagagagtgctctggagaacctgaaaaaggaggaatccgggagcaaggat
cacgtgctaaacctgcgccagaaagtcgaagaagccaaaagttctttggcacaaagtcgg
agcagagggaaagtgctcgaggctctgctccagcagaagaaatgtggaaatattcctggg
atctatggaaggctgggagacctgggagccatcgatgacaagtacgacgtggccatttcc
tcgtgctgtgcagccttggatcacatccttgtggacaccattgacactgcccaggactgt
gtgaacttcctgaaggctggagacattggagttgccacctttatagccctggacaagatg
gctgtgtgggaaaacaaaatgcacaaaatcccaactcctgagaatatccctaggctcttt
gacctggtgaaggtggaggaccccaaatttcgccaggccttctactttgctctcagggac
actctggtggccaaaaccctggatgaagccaccagaatagcattccaaaaggagaaaagg
tggagagtggtaaccctgaaaggacaaatcatcgaggtgtcaggaaccatgactggtggg
ggaggaaaagtcatgaagggcagaatgggctcctcagttgtgatagatgtctcagaagaa
gagatctgcaaaatggaatcccagctgcagagggactgccagagagctgcacagcgtcag
caggagaaatcccagctggaggaagacatcgggaaactggagcaggacattcaggaaatg
aagaacatctcagagaaatacacagccagcatcaagggttattctgaacaagaaatttat
ctcaaaaaccaaatcaaggagctcgaagccaatgtcactgctgctactccagacaaaact
aaacagaaggagttggaaaaagcccttgatggttataaaaaagattacgagcgtgcggct
gagaaggctgcagagatggaggaggaggtgaaacgcctgcaccagctcatcatggacacc
aacaaccagaaactgaaggctcagcaggacaaaattgataaaattgacaaggaaatagat
gaatactcctcagccatcaccaaggcccaggtggcagccaggactgcagacaggaacctg
aagaaatccgaggaggctctgcagcgcacggagaaggaggtggaagaaaatgagaaggag
atgaaaaactggacagcagagctgacaacactggaggaaaaagccagtgaggtgatgaaa
gagtgcaaggaggctgaggaagctttgccagcagtgcaggaggagcagaagaatttactc
caggagatgaaaactattcaggatgctgaacatgcccttcagagtgaagctctgagcatc
aagctgaaaatggaacaaattgacagccacatctccacccaccagggaaaggttaaatac
tggcagaaggagatctccaggctggccctgcacgccatcgagggcgaggcccccgcggag
ctgcggcagctgagcgaggcggagctggaggcgctgcaggagcccgacgcgctcagcaag
aagatcgcgctgctggaggcggagcgccaccagctccgccccaacctggccgccatcgcc
gagtacaggaagaaggaagagctgtacctgcagcacgtgggagaactggacaacatcacc
agtgagagggacaaattcagagaggcctgtgaagggctcaggaaacagaggctgaatgaa
ttcatggcaggatttaatgtcatcaccaacaagctgaaggagaactaccagatgctcacg
ctgggaggggatgctgagctggagcttgtggacagtctggatcccttctcagagggaatc
atgttcagtgtccggcctcccaagaaaagctggaagaaaatcttcaacctgtcaggaggg
gagaagaccctgagctccctggccctggtgtttgccctccaccactacaaacccacccct
ctgtatttcatggacgagatcgacgccgccctcgacttcaaaaacgtttccatcgtggca
ttttacatctatgaacaaaccaagaacgcccagttcatcatcatctccctgaggaacaac
atgtttgagattgcagacagattaattggcatttataaaacccagaacaccaccaaaagt
gtggccaccaaccccaaagtcctggctgtgaaaggactggaggaacttggcctccctgag
tgcagtgtagcccaaaaatag
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