Oenanthe melanoleuca (Eastern black-eared wheatear): 130256759
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Entry
130256759 CDS
T09236
Symbol
DHX36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130256759 (DHX36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130256759 (DHX36)
03012 Translation factors [BR:
oma03012
]
130256759 (DHX36)
Enzymes [BR:
oma01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130256759 (DHX36)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130256759 (DHX36)
Translation factors [BR:
oma03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130256759 (DHX36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
Helicase_C
HA2_N
AAA_22
nSTAND3
ATPase
AAA_19
AAA_23
Motif
Other DBs
NCBI-GeneID:
130256759
NCBI-ProteinID:
XP_056354673
LinkDB
All DBs
Position
9:complement(13186765..13202945)
Genome browser
AA seq
983 aa
AA seq
DB search
MSYEQRRGWGRGRGRGRGGDGGSASAATSAAGGPGGRGRHPGHLKGRDIGLWYARKQGQK
NRDADRQQRAVVRMDERREEQIVQLLNAVQTRNDKEQEAMSWWSGDEEGSAPQQPPKAKP
DAEKAPVRQIPTWEKTSLDLDVEYLCEKTEQDADLDEQLKEDLMKKRSDPRYIEMQRFRE
KLPSYKMREELVRLINSHRVTVISGETGCGKTTQVTQFILDDHIERGLGSTCRIVCTQPR
RISAISVAERVAAERAEGCGNGRSTGYQIRLQSRLPRKQGSILYCTTGIVLQWLQSDKHL
SSISHVVLDEIHERNLQSDVLMSIVKDLLNVRLDLKVILMSATLNAEKFSEYFDHCPMIH
IPGFTFPVVEYLLEDVIEKLRYTPERTDRRLHWRKGFMQGRVSRPEKEEKEEIYREQWPA
YLRQLQGRYSASTIDALEMMDDDKVDLDLVAALIRHIVLEEEDGAILVFLPGWDNISTLH
EILMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVF
VIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDD
YQLPEILRTPLEELCLQIKILKLGGIAYFLSKLMDPPSCDAVTLAINHLMELNALDRQEE
LTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARR
KELSKNSKSDHLTVVNAFTGWEEARSCGFRNEKDYCWEYFLSSNTLQMLHNMKGQFAEHL
LAAGFVNSRNPKDPKSNTNSGNEKLLKAVICAGLYPKVAKIRPSFSKKRKMVKVCTKTDG
SVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQ
DTIAVDEWIVFQSPEKIANLVKKLRQELDDLLQEKIERPRPVDWAAVRSRDTALLSAIID
LITTQENAAARSFAPRFQGERCS
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccggggctggggccgcgggcgcggccggggccggggcggcgat
ggcggctctgcctccgccgccacctccgcggcgggcgggcccggcgggcggggacggcac
cccgggcacctgaagggccgcgacatcgggctgtggtacgcccgcaagcagggccagaag
aaccgggacgcggaccggcagcagagagccgtggtgcgcatggacgagcgcagggaagag
cagatcgtgcagctgctgaacgctgtccagactagaaacgacaaagagcaagaagccatg
tcctggtggtccggggatgaagaaggctctgctccacaacagcctcccaaagcaaaacca
gatgctgaaaaagctcctgtaagacagattccaacctgggaaaaaacatccctggatctg
gatgtggaatatctctgtgaaaaaactgagcaggatgctgatttagatgaacaacttaaa
gaagacttaatgaagaagagatctgatcccagatatattgaaatgcagagattccgagag
aagctgccctcgtacaagatgagagaggagctggtgaggctgatcaacagccaccgggtg
acggtgatcagcggcgagacgggctgcggcaagaccacgcaggtgacacagttcatcctg
gacgatcacatcgagcgcgggctgggctccacctgcaggatcgtgtgcacgcagccgcgc
cgcatcagcgccatctcggtggctgagagggtggctgcagagagggcagagggctgtggc
aatggcaggagcacgggctaccagatccgcctgcagagtcggttgccaaggaaacaaggt
tcaattctgtactgtaccacgggaattgtcctgcagtggctccagtcagataagcacttg
tccagcatcagtcatgtagttcttgatgaaatccatgaaagaaatcttcaatcagatgtt
ctaatgagcattgttaaagaccttctgaatgttcgactggatctgaaagtcatactgatg
agcgctactttaaatgcagagaagttttctgagtactttgaccattgccccatgattcac
atccctgggttcactttcccagtggtggaatacctgctggaagatgtcattgagaagttg
aggtacaccccggagaggacagaccgtcggctgcactggaggaagggcttcatgcagggc
cgtgtcagcaggccagagaaggaggagaaggaggagatctacagggagcagtggccagcc
tacctaaggcagctgcagggcaggtactcagcaagtaccattgatgccctggaaatgatg
gatgatgacaaggtggacctggaccttgtggcagcactgatcagacacattgtgctggaa
gaggaggatggtgcaattctggtgtttctgccaggctgggataacatcagcactttgcat
gagatcttgatgtctcaagtcatgtttaagtcagataggttcatcatcatacctttgcat
tcactgatgcctactgttaaccagactcaggtgttcaagaagaccccaccaggagtgagg
aaaattgtgattgcaaccaacattgcagagaccagcatcacaatcgatgacgtggtgttt
gtgatagatggagggaaaatcaaggagactcactttgacacccagaacaacatcagcacc
atggcagctgagtgggtcagcaaagccaatgccaagcagaggaagggtcgagcaggaaga
gttcagccaggccactgctaccacctgtacaacgggctgcgtgccagccttctggatgat
tatcagttacctgagatcctcaggacacccttggaagagctctgcttacaaatcaagatc
ctgaagcttggtggaattgcctattttctgagcaagctgatggaccccccatcttgtgat
gccgtgacattggccataaatcacctcatggagctgaatgctctggacaggcaggaggag
ctgactcccctgggtgtgcacctggctcggctgcctgtggagccacacattgggaagatg
atcctgtttggagctttgttctgctgcctggaccctgtgctgaccattgcagccagcctc
agcttcaaggacccttttgtcatccctctgggcaaagagaaaatcgcagatgcaagaaga
aaggagctgtcaaagaactcaaaaagtgaccatctgactgtggtgaatgctttcactggc
tgggaggaggctcggagttgtggtttcaggaatgagaaggactattgctgggaatatttc
ctgtcctcaaataccctgcagatgctgcataacatgaaagggcagtttgctgagcatctc
cttgcagctggatttgtgaacagcagaaaccccaaggatcccaaatccaacaccaactca
ggtaatgagaagctgctcaaagcagtcatctgtgctggcctctatcccaaagtggcaaag
atccggcccagcttcagcaagaagaggaaaatggtgaaggtttgcaccaagacagatggg
tcagttaatatccatcccaaatcagtgaatgtggaggaaacagagttccattataactgg
cttgtgtaccatttgaagatgaggaccagcagtatttacctgtatgattgtacagaggtg
tctccatactgcctcctgttctttggaggggatatatccattcagaaggacaaggaccag
gacaccatcgctgtggatgagtggattgttttccagtctccagaaaaaatagcaaacttg
gtcaagaaactgaggcaggagctggacgacctgctgcaggagaagatcgagaggccgcgg
ccggtggactgggcggcggtgaggagccgggacacggcgctgctgagcgccatcatcgac
ctcatcaccacgcaggagaacgcggccgcgcgcagcttcgcgccgcgcttccagggggag
cgctgcagctga
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