KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130256774
Entry
130256774         CDS       T09236                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04382  Cornified envelope formation
oma04510  Focal adhesion
oma04512  ECM-receptor interaction
oma04518  Integrin signaling
oma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130256774 (COL4A3)
   04518 Integrin signaling
    130256774 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130256774 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130256774 (COL4A3)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    130256774 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oma04147]
    130256774 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:oma00536]
    130256774 (COL4A3)
Exosome [BR:oma04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   130256774 (COL4A3)
Glycosaminoglycan binding proteins [BR:oma00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130256774 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 130256774
NCBI-ProteinID: XP_056354707
LinkDB
Position
9:9435946..9490059
AA seq 1670 aa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NT seq 5013 nt   +upstreamnt  +downstreamnt
atggccggcgggggctgccccggccgcctggcgccggtgctgctgctcgccctgctctgg
ccgggccgcgccgcggcggagaactgtgtatgcaaaggtaaaagtccctgcttttgtgat
agcacaaaaggtagtaagggtgaaaaaggctttcctggtgttccaggtccacctggtcaa
agaggctttcctggtccagaagggcctccagggccacagggaccaaagggttctccaggg
tttacaggcttagttggacccaaaggtatacgaggactcccaggaatacctggattttca
ggtcctccaggccttcctggtgaaccaggagctgttggtcctcctgggctcccgggtgtt
ccaggatgcaacggcaccaagggtgaccaaggatttccaggtcctccaggccaaagaggt
gctccaggccttccaggagttgttggtatcaaaggagagaaggggtaccctgcagaggga
tatagccaagagtatggtgcaaaaggtgatcctggattaccagggatgccaggtctccag
ggtgcccagggtgctcaaggatatcctggggaacttggaccacagggccctccaggacct
ttaggcatgcctgggaaaccaggacctcctggacctaagggtcttatgggactgaaagta
ataggagccaaaggaagaaagggtgacattgggttaactggaccccctgggcccccagga
actgttattgtgacgttaagcggaccagacaacatcacggacttgaaaggagaaaaagga
gaaaaaggatcaagaggacccccagggccaatgggatttacagggccggttggtgactct
ctaagtgaaaaaggtgaccaaggagaaccaggagcacaggggaagcctggaaaagaaggt
gccccaggtccaccaggtttaccgggtcaaaatggtgaacagggcaagccaggactgcct
ggaaggcaaggagctaaggggatgaaaggaaaccctggtccacctggagcttgtggtcga
actgagtattatgattatgtggctggtgaaaaaggggatgaaggaccccccggacctcca
ggaccaaaaggtcaacgtggcatacctgggccacagggtcctccaggagctgctggtaga
ccaggtgtgtcaagacctggtctgagaggtcccccaggatttcctgggccaaaaggaaca
aagggagagagaggacaaactggcttgcatattgtaggccctccaggactgcctggtatt
actggcaggcctggctctgttggattaccaggtcctccaggagaaccaggtagagtaaca
tttggaactggcctaccaggacttcctggagagccagggtgtataggacctccaggacct
ccaggagatactggcatgagaggtgatgatgctggtgtgtgtactgattgtagctacatt
ccgggaatgcctggttttcctggttctcctgggcctcgtggtcaggatggcatgcctggt
ggggaaggaacaacaggtccaaaaggttctccaggttctccaggagcaccagggtttcca
ggggctcaaggacctcaaggttttagaggagagcaaggacgtaaaggatcaaaaggtgag
ccaggatatgtacatccagaagggccaaaaggtgagcgaggagatccaggagccatggga
gacaaaggaagaagaggttcaagtggatttatgggaagacctggctctaaagggtcgaag
ggttctaaaggtgaagagggattggctggatcaaaaggagatagaggactacctggattg
cctggtagacttgggcttcctggagaaatgggccttcctggactgccaggttatggacca
caaggagtaagaggttttaaaggctctaaaggaatccgtggaccacctggattacctgga
gaagctggtctgaaaggagagaccagtagggcaactccattacctgcattgcctggacct
cagggaccacatggtttacctggacccccaggaatgcctggtaggattggagcaagaggt
cagccaggtgatccagggcattcaggaccaacaggtgacacaggttttccagggcttggg
tttcctggaaacccaggtccaaaaggagacaaaggacttgcaggaggcagagggccacca
ggttgtgaaggaaagactggagatccaggccgaactggaaacctaggacaaccaggacaa
aagggtgagccaggcatggttattcctggagagccaggaagaatgggttcaccaggaggt
catggcagtcctggctcaaaaggtgaaggtggacttccaggactcccaggcctaccaggg
catcctgggcatgatggtgatgagggactaagaggagatcgtggctcacctggacttcct
ggagacccaggttttcctgggagacctgctgaatgtcttattggcctgccaggtttgcca
ggtggccagggagctacaggcccaccaggaggaagaggtttacaaggttcaaaaggaaac
ctaggtcctcctggtctgagtatcccaggaatctacggaaggcctggggaacctggacta
ataggtcttcagggaaatatgggattacctggtcccaagggacagtctggaagaccagga
atctctggtttgccaggagcaaggggagatccaggtgcaatgggactgttaggaattcct
ggaccccccggcatggctggaagaccaggcagtccgggaatcagaggttctcctggcttc
ccaggaataaagggaagaaaagggtttcatggagaaaaaggcgaatcaggtgataaaggt
tttcctggaccatctgagaccttggttggtattggggacaaaggagagcaaggtttaaaa
ggagctcaaggccgaatgggtgcaaggggagaaaaaggagatgttggtgtgcagggtccc
ccaggtgttgatgggtctgaaggaatacctggtctaccaggagccaaaggattcatgggt
cttccagggactcctggaagacaaggattcccaggtgcactcggaaatcaaggggacatg
ggaattccaggtccaaaaggccagaaaggatctccaggctttccaggaccatcaggtgac
cctggtccaccaggctatggtggctttccaggtgacaaaggagatcctgggtacccatct
gctgggcctgcaggagaacctggtccaaagggagatccaggtcccccaggagtttttggc
agcaaaggagaaaagggctctgagggccatccaggacttacaggagtaccaggaccacgt
gggatcagaggggaaactggaggtgcaggaatcccagggaagagtggaccccctggagat
atgggtgataaagcacgccagggccgcccaggacagccaggagtcccaggccctcctggt
gccgttggagtcccaggaaaacatggacttgttggtgaaaggggtactcaaggtcaggat
ggtatgcctggtcccccaggagtaaagggagaaccaggaccaccagggagagggatccct
ggtgttcgaggttttcctggacgtagaggaatcaaaggagacatgggactgcctggtttt
cctgggcctccaggtgtgaaaggtcatcagggagatcaaggacccattggacctcctggc
tttgtggggttacctggatttcaaggtgccacaggcatggcagtcactggccagaagggg
aacagaggtattcctggtgcacatggaagaccaggtgctcctggttttccaggccttcct
ggtctttccactctcagcatgaaaggaagcaaaggtgtccgaggggcagatggaatacca
gggccaaggggcccagccggtgacattggccctcctggtcccaaaggcatagaaggtcga
tcaggctatcctggtgctagagggcaccctggatttcttggattcccaggtgtaaaagga
gaaaagggtaatcagggacccccaggaccacaaggtgcagaagggccaaggggaccaaaa
ggccagcatggcccacctggagtctctggaaaaacattctccatcccaggaagcaagggt
cctccaggactgccaggaatcccaggaacaccaggtgatcaaggagttcaagggattcct
ggactacaaggacctaaaggagtaaaaggtctaccaggacgttttggtcatccaggtcat
ccaggattgcccggtccaaaaggagacaggggatttccaggacaaagaggacaacctgga
ttgattggctttccaggtctgcaggggttacctggatcaccaggtactatcgttgctggg
ccaacaagaaaaggatttatctttacccggcatagtcagacaacaaagattccttcatgc
ccacatgggacatcccagatctatgttggctattcactgctttttgtacaaggaaatgaa
cgagcacatggacaagatcttggaacagctggtagctgcttgcagaggttcagcaccatg
ccattcttgttctgtagccccaatgatgtttgtagctttgcttctcgtaatgactactcc
tactggctgtccaccacagtggtgatgccaccagacatggcacccatttctggcagggca
ctagagccccagataagcaggtgtgttgtctgtgaaggagctgcaatggtaatagcagtt
cacagccaaactactgtagttcctgcatgtccagatggctggatgtctctctggaagggt
ttttcttttgttatgtacacaagtgccggctcagaagcttctggccaagcattggcatct
cctggatcttgtctggaagaatttcgggctgtcccgtttatagagtgccatggcaggggg
acgtgcaactactacacaaattcctacagtttctggttggcatcattaaatccaagaaga
atgttcaggagacctgtgccacagactttgaaagcaggacaactagaaaatatcatcagt
cgttgtcaggtctgcatgaggagaccaatctaa

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