Oenanthe melanoleuca (Eastern black-eared wheatear): 130256785
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Entry
130256785 CDS
T09236
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oma01002
]
130256785 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130256785 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130256785 (USP13)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130256785 (USP13)
Peptidases and inhibitors [BR:
oma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130256785 (USP13)
Ubiquitin system [BR:
oma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130256785 (USP13)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
130256785 (USP13)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
UBA_9
UBA_8
Motif
Other DBs
NCBI-GeneID:
130256785
NCBI-ProteinID:
XP_056354739
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All DBs
Position
9:19031142..19079718
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AA seq
861 aa
AA seq
DB search
MQRAALFRGGDAQMAAGDLGELLVPYMPTIRVPKSGDRVYKTECAFSYDSPDSEGGLYVC
MNTFLGFGREHIERHYRKTGQCVYLHLKRHVIEKVPGASGGALPKRRNAKLFLDLEISSD
LNSDDFEYEDEAKLVIFPDHYEISLPNIEELPALVTIACDALLSAKSPYRKQESDSWEEE
LQASKHAKTLVQLDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNGHA
MEHYKETGYPLAVKLGTITPDGADVYSFDEEEPVLDPHIAKHLAHFGIDMLQMQVTENGL
RDNDIKPRVSEWEVIQEAGVKLKPMYGPGYTGMKNLGNSCYLNAVMQAIFSIPEFQRAYV
GNLPRIFDYSPLDPTQDFNTQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKPQHNGIS
PRMFKAFISKGHPEFSSNRQQDAQEFFLHLINLVERNPVGSENPSDVFRFLVEERTQCCQ
SRKVRYTERVDYIMQLPVAMEAATNKDELIAYELKRREAEAARRPLPELVRAKIPFRACL
QAFSEPSNVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSIDM
PDFLDISHLRARGLQPGEEELPDIAPPIVIPDDPKDHMANHFVESLDIDESSVMQLAEMG
FPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLVTPAFGEVASSGAAALGAVGLD
NQPPEEMVAIIISMGFQRNLAIQALKAANNNLERALDWIFSHPDPEEESDPALDMMDMEN
NANANILADTGSEGPRIKDGPGRYELFGFISHMGTSTMSGHYVCHLRKEGRWVIYNDLRV
CASERPPKDLGYIYFYHRIPS
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgggccgcgctcttccgcggcggcgatgcgcagatggccgccggggacctgggc
gagctgctcgtcccctacatgcccacgatccgggtgcccaagtcaggggaccgggtctac
aagacggagtgtgccttctcctacgactcgcccgattcagaaggaggtctctatgtgtgc
atgaacacgtttctgggatttggaagggagcacatcgagaggcattaccggaaaacagga
cagtgtgtctacctgcacctgaaacgacacgtgatagagaaggtaccaggagcatctggt
ggagctttaccaaaaaggaggaatgctaagctatttttagatctggagataagcagtgat
ctcaacagcgatgactttgagtatgaggatgaagcaaaacttgttatctttcctgatcac
tatgaaatctcattacccaacatagaagagctaccagcactggtgacgatagcttgtgat
gcactcctcagtgcaaaatcaccctacaggaagcaggaatctgactcctgggaagaagag
ctgcaggcatctaaacatgctaaaacacttgtacagttagacaatggtgttagaattccc
cccagtgggtggaagtgctccaagtgtgacctgcgggagaacctgtggctgaacctgacc
gacggctctgtgctctgtgggaagtggttcttcgatggcagtgggggcaatgggcacgcc
atggagcactacaaggagacaggttatcccctggcagtgaagctgggaaccatcactcct
gatggagcagatgtctattcctttgatgaagaggagccggttttagatccacatatagca
aaacatttggcacactttggaattgatatgctgcagatgcaagtgacagagaatgggctg
agagataacgacataaagccaagagtctcagaatgggaagtgattcaggaagctggtgtg
aagctcaagcccatgtatggcccaggatacactggcatgaagaacctgggaaatagctgc
tacctcaatgctgtcatgcaagccattttcagcatcccagagttccagcgagcgtatgtg
ggaaaccttccacgaatatttgactactcccctcttgatccaacacaagatttcaacact
cagatggctaaactggggcacggcctcctttcaggccaatattctaagccacccatgaaa
tctgagctcattgagcaagtgatgaaagaagaacacaagcctcaacacaatggaatatct
cctcgaatgttcaaggcttttataagtaaaggccacccagaattttcatctaacagacaa
caggacgcacaagaatttttcctacatcttataaatctagtagagaggaaccctgtgggt
tcagaaaaccccagtgatgtgttccggttcctggtggaggagcgcacgcagtgctgccag
tccaggaaggtgcgctacacggagagggtggactacatcatgcagctacctgtggccatg
gaggcagcaacaaacaaagatgaattaattgcctatgaattgaagaggagagaagcagaa
gctgcaaggagacctctgccagagctggtccgtgccaagatcccatttagagcatgtctg
caggccttttctgaaccaagcaatgtagaggatttctggagcagtgcccttcaagcaaaa
tctgcaggagttaagacttcccgttttgcttcctttcctgagtacttagtggtgcagata
aagaaattcacctttggccttgactggatacccaaaaagcttgatgtttctatagacatg
ccagatttcctggatatcagtcaccttcgggccagggggctccagccaggagaagaggag
ctcccagacattgctcctcccattgtcattcctgatgacccaaaagatcacatggcgaac
catttcgtggagtccctagatattgatgagtcctcagttatgcagctggcagagatgggc
tttcctttggaagcatgtcggaaagctgtgtactatacaggcaacctgggtgctgaagtt
gctttcaactggatcattgcacacatggaagagccagacttcgctgagccattggtcaca
cctgcatttggagaagttgcttccagtggggcagctgctttaggagctgtagggctagat
aaccagcctcctgaagagatggttgcaattatcatttccatgggattccaaaggaatctg
gcgattcaggcgctgaaggcagcaaacaataacttggagcgtgcactggactggatcttc
agccaccctgaccctgaggaagaaagtgaccctgctttggacatgatggatatggagaac
aatgctaatgccaatatccttgcagacacagggtctgagggacccaggatcaaagatggc
cctggaaggtatgagctgtttgggttcatcagccacatgggaacatccacgatgagtggc
cactacgtttgtcacctcagaaaggaaggaagatgggttatctacaacgaccttagagtc
tgtgcctcagaacgacctcccaaagacctgggctacatttatttttaccacaggatacca
agttag
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