Oenanthe melanoleuca (Eastern black-eared wheatear): 130256815
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Entry
130256815 CDS
T09236
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04136
Autophagy - other
oma04140
Autophagy - animal
oma04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130256815 (ATG16L1)
04136 Autophagy - other
130256815 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130256815 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oma04131
]
130256815 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
oma03029
]
130256815 (ATG16L1)
Membrane trafficking [BR:
oma04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
130256815 (ATG16L1)
Others
Rab GTPases of specific organelles
Auto phagosome
130256815 (ATG16L1)
Mitochondrial biogenesis [BR:
oma03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
130256815 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG16
WD40
ANAPC4_WD40
eIF2A
NBCH_WD40
Ge1_WD40
ZapB
Fez1
PALB2_WD40
WD40_like
HTH_6
Lipoprotein_6
HEF_HK
FlaC_arch
V_ATPase_I
CCDC93_CC
FUSC
Motif
Other DBs
NCBI-GeneID:
130256815
NCBI-ProteinID:
XP_056354812
LinkDB
All DBs
Position
9:6306230..6327523
Genome browser
AA seq
624 aa
AA seq
DB search
MASGLRAAGFPPWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLHAVLADKLQAEK
YDMQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DKEMQMNEAKIAEYLQRISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKL
RKTTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDD
IEVLADETSDTAEETSPVRAVSRTSSKRLSQPAGGLLDSISNIFGLSESPLLGHQSSDTA
RRRSLSSLPAPQDNAEPHPGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVKLWEVLGDRCEPKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRTESIVKELELFGRITALDLNPERTELLTCSRDDLLKIIDLRVSAVK
QTFSAQGFKCGSDWTRVVFSPDGNYVAAGSADGALYIWNVLTGKVERTLAKHHSSSINAV
TWSPAGAHVVSVDKGNKAVLWSEF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggggctgcgcgccgccgggttccctccctggaagcggcacatcgcggaggag
ctgcggcggcgggaccggctgcagcgccaggctttcgaggagatcatcgcccagtataac
aagctgctggagaagtcagaccttcatgcagtgctggctgataagcttcaagcagaaaaa
tatgacatgcagagcagacatgagatcagcccaggacatgatggcacatggaacgatgct
cagctgcaggagctggcccagctgaagataaagcaccaggaggagctgactgagctgcac
aagaaacgtggagagcttgcccagtctgtaattgatttgaacaaccaaatgcagcagaag
gacaaagagatgcagatgaacgaagccaagattgcagagtatttgcaaaggatttctgaa
ctggaaacagagtgccaggaattgcgtagcaaactgcaagatcttgagcgagctaatcag
acactgaaagatgaatatgatgctctccagatcaccttcaatgccttggaggagaagcta
aggaaaactactgaagacaaccaggagctggtttcacgttggatggcagagaaagcacaa
gaagccaatcgtttgaatgcagaaaatgaaaaggattcaaggagacgccaggccaggctg
cagaaggagctggcagaagctgccaaagagcccttgcctgttgaacccagggatgatgat
atagaagtgctcgcagatgaaacctctgacacagctgaggaaacctctccggtgcgagct
gtcagccggacatccagtaagcgactctcccagccagctggaggccttctggactctatc
agtaatatctttggtctgtctgagtctccccttttgggacatcagtcttctgatactgcc
aggaggcgttctctgtcctcactccctgcaccccaggataatgcagagccacatccaggt
gccagtaaagaagtgagagtgcccactactgccatatgtgtctttgatgcacatgatggg
gaggtgaatgcggtgcagttcagccctggctcccggttactagcaacaggaggcatggac
cggagggttaagctttgggaagtattgggagataggtgtgagcccaaaggttccctctct
ggcagtaatgctgggattacaagcatagagtttgatagtgctggttcttacctcttagca
gcttcaaatgactttgccagcagaatctggacagttgatgacaatcgattacggcacacc
ctgacaggtcacagtggtaaagttctgtcagccaagttcctgctggacaatgcacgtatt
gtttcgggaagtcacgaccggaccctcaagctctgggacctccgcagcaaagtttgtata
aaaacagtgtttgcgggatctagctgcaatgacatcgtgtgtactgagcagtgtgtaatg
agtggacattttgataagaaaattcggttctgggacatcaggactgaaagcatagtaaaa
gaactggagttgtttggaagaatcacagctctggacctgaacccggagcgaacagagctc
ctgacctgttcccgtgatgatctcctcaagatcattgatctgcgggtcagtgctgtcaag
cagacgttcagtgcccagggattcaaatgtggctctgactggacgagagttgtgttcagc
cctgatggtaactatgtggctgctggctcagctgatggggccctctacatttggaatgtg
cttactgggaaggtggagaggacgcttgcaaagcatcacagttcttctatcaatgcagtc
acgtggtccccagcgggtgcccacgtggtcagtgtggacaaaggaaacaaggctgtgctg
tggtctgagttttga
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