Oenanthe melanoleuca (Eastern black-eared wheatear): 130257027
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Entry
130257027 CDS
T09236
Symbol
PCDH9
Name
(RefSeq) protocadherin-9
KO
K16498
protocadherin delta 1
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130257027 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oma01009
]
130257027 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oma04515
]
130257027 (PCDH9)
Protein phosphatases and associated proteins [BR:
oma01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130257027 (PCDH9)
Cell adhesion molecules [BR:
oma04515
]
Cadherins
Protocadherins
130257027 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
RCR
EphA2_TM
V_ATPase_I
DUF6249
7tm_3
Motif
Other DBs
NCBI-GeneID:
130257027
NCBI-ProteinID:
XP_056355228
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All DBs
Position
1:complement(60650438..61316797)
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AA seq
1203 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSNTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSGQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPSTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGGGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSD
GPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKLV
NGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPLANLKSYKQAPGSVESPKE
HQL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtgcccata
gggaacataccaaaggacctgaacatttctcatatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtgtctaaagcaggggatgcacctctggtcaaagtgtccagt
aacacgggggaaatctttacaacatctaacagaatagacagagaaaaactatgtgctgga
gcttcctatgcagaagaaaatgagtgtttctttgaacttgaagtggtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggatactaatgacaatgcgcct
atgtttccatcccctgtcatcaatatctccatcccagaaaacactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaatggtgtgcagcactatgag
ttgttaaatgggcagagtgtctttggactggatattgtagaaactccagagggggagaaa
tggcctcagctgattgtgcagcagaacttggacagagagcaaaaggacacctacgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagctatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtctttaaagagagtcaagtagaggtccat
ataccagagaatgcccctgtaggcacctctgtaattcagcttcatgctacagatgctgat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccctgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtccttagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagcc
cgggcaactgtcaccatcaatgtcactgatgtaaacgataaccctcctaacatagacctc
aggtatataataagtcccatcaatggcacagtgtacttatctgagaaagatcccatcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaatggcaaagtgatc
tgtttcattgagagagaggtccccttccacttgaaagctgtttacgacaaccagtatttg
ttagagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtg
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaagctggag
gatgaaaatgacaaccctccgatattcagccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggtcctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagagtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaacggcacccctcctttgcagagtcaagcagcagtaattgtt
actgtgttggatgaaaatgacaacagtcccaaatttactcataatcatttccagtttttc
gtatcagagaacttaccaaagtatagcacggtgggggtgatcacggtgactgatgcagat
gctggggaaaataaagccgtgaccctttccatcctgaacgacaatgaaaactttgtgctg
gatccatactctggagttataaagtccaacgtttcttttgatcgagaacagcagagctct
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtgacaataaacgtgatggatgttaatgacaacagtcctgttgtcatctacccaccttct
aatacttctttcaagctagtgccactctcagcaattccaggatcggtggtagccgaagtc
tttgctgtggatatagacactggcatgaacgctgagctgaagtacacaattgtaagtggc
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccaactcctaatgacgtggggctgcaccgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttatatgtcaatgatactgctggaaat
gcctcctatatttatgacctgatacgcaggactatggaaacacctttggatcggaacata
ggggacagtggccaaccctaccaaaatgaggactatctcacaatcatgattgctattgtg
gcgggtgccatggttgtcatagtggtgatatttgtcacagttcttgttcgctgtcggcac
gcctccaggttcaaagctgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagctcc
cttttgaactttgttaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcaaagtataggaagatttgattgg
ggcacagcaccaccatcaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccacgtgattcaggaactcccgttggacaacacctttgttggtggttgtgacaccctt
tccaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtcccagcgccgtgttacatttcac
ctccccgatggctcccaggaaagctgcagtgacagtggtctgggagaccacgagccagtg
ggtggtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaattctac
gaccaggcttcaccggacaagaggactgaagctgatggcaactctgaccccaattctgat
gggcctcttggtccacgaggattagctgaagctacagagatgtgtactcaagaatgcctg
gttttgggtcactcagacaactgttggatgcctcctagcttgggtccataccaacagcca
aagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaactagtt
aatggacacacgttgaccaggacctggaaagaagacagcaacagaaaccagttcagcgat
cgaaagcagtatggttccagtgagggccatttcaacactggcaaccacatgactgacatt
cctctggccaacttgaagtcttataaacaggccccaggatctgtggagagtccaaaggag
caccagctataa
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integrated database retrieval system
