KEGG   Oenanthe melanoleuca (Eastern black-eared wheatear): 130257035
Entry
130257035         CDS       T09236                                 
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
oma  Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04382  Cornified envelope formation
oma04510  Focal adhesion
oma04512  ECM-receptor interaction
oma04518  Integrin signaling
oma04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oma00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    130257035 (COL4A4)
   04518 Integrin signaling
    130257035 (COL4A4)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130257035 (COL4A4)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    130257035 (COL4A4)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    130257035 (COL4A4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oma04147]
    130257035 (COL4A4)
   00536 Glycosaminoglycan binding proteins [BR:oma00536]
    130257035 (COL4A4)
Exosome [BR:oma04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   130257035 (COL4A4)
Glycosaminoglycan binding proteins [BR:oma00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130257035 (COL4A4)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 130257035
NCBI-ProteinID: XP_056355238
LinkDB
Position
9:complement(9375826..9432445)
AA seq 1681 aa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NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcattaacaaaggattcatttgaacggattaagtggcttatcacagctgcctggtgg
ctgctgattgttttttcaactcaaggaattgatgggggaggatatgcatatattgatcca
tgtgggggacaggattgttctgtttgtcgatgctttccagaaaaaggatccaggggtcag
cctggtgagctgggggctcaaggtccaattgggtccttgggatctacaggaccagctggt
ctgccaggggagaaaggacagagaggtgagaatgggcagcctgggccagctggagaaaaa
ggtgacaagggcccaactggagtcccaggatttcctggtttagatggtgttcctggcctc
ccaggaagggaaggacccagaggcaagcatggtttggatggctgcaatggctctagggga
gacccaggacttccaggagaaagcggttatatgggaccaagaggtccttatggaattcca
gggcaaaaaggagaaaaaggaaattcagtgtatatttcacgttttggaaaaggactacca
ggagagagaggtgatcctggtccccctggcatgcctggacctagagggccaagaggtaca
acgggcccatctggatatccaggccatccaggcttgcctggtactccaggttaccctggt
ttgccaggtgaacagggaaatccagggattggagtagatggacaaaagggggagccgggc
gacatcggactgcctgggccgcccgggtcaccactcttagttggacctcctggagctcag
ctgttcaaaggacaaaagggccaaaaaggattacctggggtaacaggatacagagggcca
cgtggacccaaaggcatacttgggagaggagaaaagggtgagaaaggccttcctggattc
cctggactgcggggtcatcctggttcttatggacctgcaggttttcctggaatgaagggt
gaaacaggatttgctggttttcctggacaacctggctatccaggcatacagggggatcca
ggagagaaagggcccccaggtcctcctggagctgttggaactccactgccttctataaaa
ggtccacgaggagatcctggatttccaggtcctgttggtgaaatggggtcagttggacca
attggtccttcaggccttctaggaagaccaggatatgatggaacaagtcttcctggcctg
ccaggagtaagtggggcaccaggagctcaaggttttcaaggggaccctggtttgcctgga
acaggtgaattaatcccaggaagaccgggatttcctggaccaccaggcccaccagggcag
ccaggaagacaaggcttacctggactacccagtgtaatctgtactgacagagggatccct
ggagaacctggagcaaaaggtcagataggccttccaggaagaaaaggtgctaaaggagag
aagggtaatcaaggcttctgctcatgtcgtgctggtcctcctggtccccgtggtgtgcaa
ggacctccaggtgctcaaggaaggaaaggacaaatgggataccctggaagacatggggaa
aagggcgacccaggctcatccggggcagtgggaccaccagggctccctgggactcctggt
tttgctggacagcatggggaaaaaggagagaagggagatcctggaagagttaaaataaaa
ggattaaaaggtgaaagaggacctactgggcttcaaggatttccaggccaaagaggtctt
gatggcagagatggggaactaggattgccaggggaaaaaggagcggagggcgattctgga
gtagcagttccaggtgataaaggattccctgggctcccaggaactcctggagtaaaaggc
cagatgggattgcctggtttgggacttcctgggtctccaggagccagaggtagccccgga
gactttggtgatatgggtaatgttgggccacctggtccaaaaggccagaaaggtgaaact
gtctgcattacatcaccatatcctggaaatccaggtccccctggttttaaaggtattcaa
ggacagaagggtttaaaaggacttcctgggcatcctggaccaactggctttgatgggcaa
aaaggctatcgaggaaggcctggagcaggaatccctggaccagaaggctttcgaggcaca
gctggtgatcctggtgatgaaggtgaaagaggatctacaattgatggcaaacatggcctt
ccaggtccacctggcatagacggtcagaaaggtcttccaggtgacaccacttatggccct
ccaggaatcccaggcaacaggggactgccaggaccccctggtgcacagggagcaaggggt
aatccaggcattcctggacttcaaggacaacctggcaccccaggatttccaggtgccaaa
ggttttagaggcccagaaggtgatgtaggagcaccaggctgtccaggcttccctggctca
ccatgtgtcccaggcttaccaggaccacctggactcagaggtgtcatgggactgccagga
cttcaaggcttaccaggctttaaaggtcagaggggagacaggggcctggctgggccgcct
ggaatcaaaggtctcaaaggctctttgggctcacgaggtctcccaggtcctccaggctca
cgaggtcccccaggacttccaggcaataaaggacccattggcttccctggagaaacagga
agcaaaggcattcagggaccccaaggattcccaggactcccaggaatacaaggcccaatg
ggaatctttggtgtaaaaggtgaagaaggaagaatgggtctacctgggcctagtggagaa
tgtggagatatgggaataaaaggtgagagggggcctccaggagacagcggctacatcaac
ctccgtcttgagaaaggacaaatgggggacccagggtttcctggtgaccatggactgaga
ggtgaaagaggtgaaaaaggcaatactggtttcagagggacacgaggatttccagggaag
aatggtgttccaggattgccaggtgaccaaggtgacactggagtgatggggtttccagga
tcacggggtttgcctggaccaaagggccttcaaggaattacaggttttcaaggagaacca
ggtgaccagggtgatgttggcttaccaggaaaccctggatatccaggactgattggcccc
aaaggatgtaaaggcaagagaggcgacccaactcctctgcttggcacgcacggtcggaaa
gggcctccaggagatccaggattgccaggatttagtggatttccaggggagaagggttta
ccaggtatccaaggacagcctggaagaccaggatccaagggtgaccctggatatccaggg
ccacctggattgccaggagctacaggtcctcaaggattgccaggagaacgtggagaagat
gggaaacctggaattttgggacctccaggtttgcaagggttgcctggatcccaaggcaga
aaaggtcttcctggactgcctggactggatggcttggatggactaaaaggtcaaaaaggt
tctgcaggagctccaggtcagagtgagacagggcccccaggatactcaggagaaattgga
ccaaaaggagacagaggtgaacctggatggcctggtatttctattccaggccccccagga
gaaaggggattcccaggatttccaggtagaagaggacctgttggacccactggacctatg
ggaagatctcctgatagtgcttcccctggtcctccaggggatcaaggattacctggttta
gatggaatcagaggtgatccagggaatcctggtccccctggagaaactatctttgtgcga
ggagatccaggtgatagcggcatgcaaggggcaccaggtaatccagggccacgaggacaa
cagggagccagaggccctccagggagccaaggaagagaaggcccaaagggtcctatgggg
gtccatggcccacaaggtccacctggtgctataggacaaccaggagaccaaggttttcca
ggaagacctggtcccagaggtcccacaggtttcataggtgaccctggtgaaccaggaaaa
gtagatgattcatgccctaaaatcccagggcctcctggggaagcaggacaaagaggagag
gatggctctgcaggattaccagggccaataggccaccctggaccccaaggcataaaaggt
gaagaaggatcatgtggcctgccaggtcaagatgggttacctggggcacctggaccacca
ggggaccaagggagccgaggagaacaaggatatgctgggccacaaggtccacctggccag
actggtgtcccaggacaaccaggcccccaaattagatctgcaagtggattcttgcttgtt
ctgcacagtcagtcagacagagaaccactctgcccacaggggatgccaaagttatggact
ggctatagtctgctgtacctggaaggacaagagaaagcccacaatcaagatcttggtctg
gcaggatcctgcctgcctgtgtttagcaccatgccatttgcctactgcaacatcaaccag
gtgtgttactacgccagccgcaatgacaagtcctactggctgtccagcgccgcgccgctg
cccacggcgccgctggctgaggaggaggtccagccctacatcagcaggtgtgctgtgtgc
gaggcccccgcacaggcagtggcactgcacagccaggaccagtccattcctccctgccca
cccaactggaggagcctttggataggatactcttttctgatgcacactggatctggtgac
cagggaggtggacagtcccttatgtcacccggaagctgcctggaagacttcagatcagca
ccattcatcgagtgccagggccagcggggaacgtgtcagttctttgctaatgaatacagt
ttctggctgaccactgtgatgcctgagctgcagtttgcatcagcccctctgtcagggact
cttaaagaaggacaagagcagaggaaaaaaatcagtagatgccaggtatgcctgaagcat
ggctaa

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