Oenanthe melanoleuca (Eastern black-eared wheatear): 130257355
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Entry
130257355 CDS
T09236
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130257355 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oma04990
]
130257355 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
oma04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
130257355 (THSD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
ADAMTS_CR_3
TSP1_spondin
TSP1_CCN
PLAC
Motif
Other DBs
NCBI-GeneID:
130257355
NCBI-ProteinID:
XP_056355760
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All DBs
Position
10:3663489..3873208
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AA seq
1095 aa
AA seq
DB search
MVDSLIVSLRLLSSLAVLGFQFVIPQPSIEHRKVPQRIEEQGDAPEDSGAGVPGLWGSWG
PWSACSRSCSGGVMEQTRPCLPAYYRERYRRPGRHFPASERPLPHHSARYEEPLSAYPGH
VISAIRTSVPLHRSEEQPWAGPRNSSQGGRAALRGSRHSQGPRHGAKPDKRNRSRNPIGP
GKYGYGKVPYILPLQTDTGQQPQKLRRQRQSSRSALGSYGPAAAPSLQHGSLYQEPAAPQ
PGHRGLGPSLQHGSLYQEPAAPQPGHRGLGPSLQHGSLYQEPAAPQPGHRGLGPSLQHGS
LYQEPAAPQPGHRGLGPSLQHGSLYQEPAAPQPGHRGLGPSLYHPPAFPASQSLFHSADS
SPQALQGQPQPQRAAAIVCIGAYKQYKLCNTNMCPESSRNIREVQCASYNNKPFMGRFYE
WEPFAEVKGSQKCELNCRAIGYRFYVRQAETVIDGTPCEPNGTAICVAGQCKSIGCDDYL
GSDKVIDKCGICGGDNTACKVVSGVFKHTLTNLGYHKIVEIPEGATKINITEMSKSNNYL
ALRSRSGRSIINGNWAIDRPGRYEGGGTMFTYRRPNEISSTAGESFLADGPTNEVLDVYM
IHQQPNPGIHYEYIIPGDNVISPQLLAHRRPGEPFNGQLGMPESTSHEDEDLHRETDILT
GQSAGTFPVIQPGRFPSHQPENQVPAMQPPRQNREYNWKQVGKTECTTTCGKGSQYPIFH
CVNRITHEEVPEGYCDSSTKPIPEEEACNLFPCPAFWDIGEWSECSKTCGLGMQHRQILC
RQIYANRTLTVQQYRCQHLEKPDTTSTCQLKICSEWQIRTEWTSCSVPCGVGQRTRDVKC
VSNLGDVVDDEECNMKLRPNDIENCDMGPCAKSWFLTEWSDRCSAECGDGIRTRSVVCMT
NHVSSLPLEGCGSNRPSETTPCSNGPCAGKVDWFAGGWTQCSTECGSGTQQREVICVRKT
EGNFDVLNPYECSDLEKPPSQQSCYLKPCGSKWFHTEWSTCSKSCEGGFRVREVRCLSDD
MAASTQCDPQLKPEEKELCNTQDCVPEIDENCKDKYYNCNVVVQARLCVYTYYKTACCAS
CTRVANRQPGFLGHR
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggtagacagtttaatagtttctttgagacttctcagttccctagcagtgctgggattt
cagtttgtcatcccacagccttcaattgaacacagaaaggtcccgcagaggatagaggag
caaggcgatgcgcccgaggacagcggtgccggggtgccggggctgtggggcagctggggc
ccctggtccgcctgctcgcggagctgcagcgggggggtgatggagcagacgcggccctgc
ctgcccgcctattaccgggagcgctaccgccgcccgggccgccacttcccggcctccgag
cggcctctgccccaccacagcgcccgctacgaggagccgctgtccgcctaccccgggcac
gtcatctccgccatccgcacctccgtgccgctgcaccgcagcgaggagcagccgtgggcc
gggccgcgcaacagcagccagggcgggcgggcggcgctgcgcggcagccgccactcgcag
ggcccgcggcacggcgccaagccggacaagagaaacagaagcagaaatcctattggtcca
gggaagtatggctatggcaaagtgccctacatcttaccgttacagactgacacgggccag
cagccgcagaagctgcggaggcagcggcaatcgtcacggagcgccctgggctcctacggg
ccggcagcggcgccctcgctgcagcacggcagcctgtaccaggagccagctgcgcctcag
cccggccaccgcggcctggggccctcgctgcagcacggcagcctgtaccaggagccagct
gcacctcagcctggccaccgcggcctggggccctcgctgcagcacggcagcctgtaccag
gagccagctgcgcctcagcccggccaccgcggcctggggccctcgctgcagcacggcagc
ctgtaccaggagccagctgcgcctcagcccggccaccgcggcctggggccctcgctgcag
cacggcagcctgtaccaggagccagctgcgcctcagcccggccaccgcggcctggggccc
tcgctctatcacccacctgccttccctgcctcgcagagtctgttccacagcgccgactcc
agcccccaggccctgcaggggcagccccagccccagagggctgcagccatcgtctgcatc
ggtgcctacaagcaatataaactctgcaacacaaatatgtgtcctgaaagcagcaggaat
attagagaggtacagtgtgcatcatacaataacaagccatttatgggtcgattttatgaa
tgggagccttttgcagaagtgaaggggagtcagaagtgcgagctgaactgccgggccatc
ggctaccgcttctacgtgcgccaggcggagacggtgatcgacggcaccccctgcgagccc
aacggcacggccatctgcgtggcagggcagtgcaagagcattggctgtgacgactatctg
ggttctgacaaggtgattgacaagtgtggaatatgtggaggggacaacactgcttgcaaa
gttgtgtctggagttttcaaacacacgctaacaaatcttggctaccacaagatagtggaa
attcctgaaggagctactaaaatcaacattactgagatgtcaaagagcaacaactatttg
gcgctgcggagccgctcgggacgctccatcatcaatggcaactgggccatcgaccggccg
ggcaggtacgaaggtggtgggacaatgttcacttacagacgccccaatgagatctccagc
accgcaggggagtcatttttagctgatgggccaacaaatgaagtccttgatgtctatatg
atacatcagcagcctaacccgggtatacattatgaatatatcattccaggagacaatgtc
attagtcctcagttgcttgctcacaggagaccaggggagccatttaatggtcagttagga
atgccagaaagtacaagtcatgaagatgaggatttgcatagagagacagacattctcact
ggacagtcagctggaacttttccagttattcagccaggaagatttccttctcatcagcca
gaaaaccaggtgcctgctatgcaaccaccaagacaaaaccgagaatacaactggaaacag
gttggaaaaactgaatgcactactacatgtggcaaaggatcacagtacccaattttccac
tgtgtcaacagaatcactcacgaggaggtacctgagggttactgtgacagcagcaccaaa
cccattccagaagaggaggcctgcaacctcttcccatgccctgctttctgggatataggg
gagtggtctgagtgcagcaaaacctgcgggctgggaatgcagcaccggcagatcctgtgc
cggcagatctacgccaaccgcacgctgacggtgcagcagtaccgctgccagcacctggag
aaacccgacacgaccagcacctgccagctcaagatctgcagcgagtggcagatcaggacc
gagtggacctcatgttcagtgccttgtggagtggggcagaggactcgagatgtgaagtgt
gtcagcaaccttggggatgttgttgatgacgaggaatgtaacatgaagctgcggccaaac
gacatcgagaactgcgacatgggcccctgtgccaagagctggttccttacagaatggagt
gacaggtgctcggcagagtgcggggacgggatccgcacgcgctccgtggtctgcatgacc
aaccacgtcagcagcttgcccctggagggctgtggcagcaaccggccctcggaaaccact
ccctgcagtaacgggccctgcgctgggaaagtggactggtttgctgggggctggacacag
tgctctactgaatgtggtagtggaactcagcagagagaagtgatttgtgttaggaaaact
gaaggtaattttgatgttttgaacccctatgaatgttcagatttggaaaaacctcccagc
cagcaatcctgctacctcaaaccatgtggttctaagtggtttcatacagaatggagcaca
tgttccaaatcctgtgaaggaggatttcgggttcgggaggtgcgatgtctgtcggatgac
atggcagccagtactcagtgtgatccacaactcaaacctgaagagaaagaactgtgtaat
acacaggattgtgtccctgaaatagatgagaactgcaaggataaatactacaactgcaac
gtggtggttcaggcccggctctgtgtgtacacctattacaaaacagcctgctgtgcctcc
tgcacccgtgtggcaaacagacagccaggcttcctggggcacagataa
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