Oenanthe melanoleuca (Eastern black-eared wheatear): 130257714
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Entry
130257714 CDS
T09236
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130257714 (CHD9)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130257714 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_Hrp3
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
130257714
NCBI-ProteinID:
XP_056356485
LinkDB
All DBs
Position
11:complement(10704903..10790061)
Genome browser
AA seq
2889 aa
AA seq
DB search
MTDPMMDFFDDANLFSETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDSLNHVQDAQ
NQQKMSEFDQLNQYDSLKLHSVNQSFNSSADNVLSPHSQFNCSPVHPQNQSNGMFPDVAD
GSPMWGHQTATTVSNQNGSPFHQGHSQSMQQNKSFVAHHDFALFQANEPQHQCASLRPQQ
SRNNTGQDALSQPKDFMEVNVSTSLRVSVNHPPSVSNPSTSQQPLSVQQFSQTASASIHF
CGNQEGNFDGQSPTITPCSVSNSQQFSSPYSYSNNHISPTSLLQPTTALSTSQQTHSISD
FTGSDAFTSQTGTKQETTEHMLNPNTPLNSSTFQMLHSAHPQGNFSSSKLSPVNINFPAS
TGSASQISHFTDPIESNGFTSLDDNLLHQVETHSEPFTGLDPDDLLQEDLLPQFDDSAFV
QDSTSHVLEHDLEHHITPQQVTPPSEPVRAPSQSQIHPWHSAVSNQHLQGRSRAALQGQP
PSKKTDGSGSYTKMQNTQVRATSEKKQKKKTDSESKQEKANRIISEAIAKAKERGERNIP
RVMSPENFPSVSAEGKEEKKGRKVKSKPKDKECKKPKTGSSSKIKEKTKIGKLIITLGKK
QKRKNESSDELSDAKQTPQQPLKDEESQKRRSNRQVKRKKYAEEGEGKQSEEEAAKVSVK
IKKNSAPLPAEQPLQLFVENPSEEDAAIVDKILSSRVIKKEISAGMTVETEEFFVKYKNY
SYLHCEWATEQQLLKDKRIQQKIKRFKVRKAQRAHFFADMEEEPFNPDYVEVDRVLEVSL
CEDKDTGEPVIYYLVKWCSLPYEDSTWELKEDVDQAKIEEFEQLQASRPDSRRLDRPPPN
SWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEIL
LTGIRGPFLIIAPLSTITNWEREFRTWTDLNVVVYHGSMISRQMIQQYEMYFRDSQGRIV
RGTYRFQAIITTFEMILGGCPELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLEHKVL
LTGTPLQNTVEELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLK
EDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKC
CNHPYLIKGAEEKILGEFKETYSPSAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLI
FSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGL
GINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLK
LGLDKAVLQSMSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQIL
QRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSL
VIDTPRIRKQTRPFSATKDELAELSEVESEGDEKPKLRRPCDRSNGYGRTECFRVEKNLL
VYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTEDG
QTRELQNHLGLSAPVPRGRKGKKVKTQASTFDIHKAEWLRKYNPEHLLQDEGYKKHIKHH
CNKVLLRVRMLYYLKQEVIGSEFQKVFDGTDASEIDVWVPEPDHSEVPAEWWDADADKSL
LIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDYMDGDVEDPEYKPAPAL
FKDDIEDDVSSPGDLVIADGDGQMMEGDKIYWPTQSALTTRLRRLITAYQRTSKNRQAQQ
LQPAFPVQTSMMQLPYEEAALNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDPERGR
FDWTKFRAMARLHKKTDESLEKYLYAFMSMCRRVCRLPSKEELVDPNIFIQPITEERASR
TLYRIELLRKVREQALRHPQLFERLKLCQPNPDLPVWWECGTHDRDLLIGAAKHGVSRTD
YHILRDPELSFMPAQRNYNQNKVTLSRTSTPLLHQYQMALSASPLTPQSRLSDAKVNAFE
DTKAKNENLKEDPQSSEDESMSTEETQTILKSEPLSPKNGTPIQITDHRPSVKAETDRRM
VAARTEPLTPNPASKKQRVSKRGSDSSSDSDSDSDRSSCSSRSSSSSSSSSSSCSHSRSG
SSSSSSSSCSSASSSSSSSSSSSSSSSSSSSEESDSDEEEAQKRAEGTPHIKAYDEESVA
SLSTTQDETQDSFQMNNGTPNSGYLLQGGYMLAASYWPKDRVMINRLDSICQTVLKGKWP
SARRSYDSTTVASFYTTKLLDSSGAAAEYSEPSAPTPPLAAVKEEYDQSPQLSKVKKHVR
EKEFTVKINDEGGLKLTFQKQGLSQKRPFESEEGALGQQQYLARLRELQNASETSLVNFQ
KSLPKSGTSSHLTASANGVIVDSQPAVKKRRGRRKNVEGVDVLFMNRNKQPNHVNPGINS
CQVVAGINPALTYTQSQGMLDAESPVPVINLKDGTRLAGDDAPKRKDLERWLKEHPGYVE
DSGACIPRMQLHDGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPPLK
DLCRFLKENPEYGVAPEWGEVVKQSGFLPEGMFERILTGPVVREEVSRRGRRPKSEAAKA
TAAAASAGTAISPLLANGLLPAVELPGLQALQHNLHNLQSLQVTAGLMGMPAGLAAAGEA
KNVAAMFPMLLSGMAGLPNLLGMGGLLTKAAESVSEEKKGNDSKETDTKKERTEDQNTDT
GGENSVSSSPSTSSAAAAANPLSLNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQN
SESNDTGSAKPTEEKEENSRVRDQEDKGGTEPSSHNENSTDEGSEKADASSGSDSTSSSS
EDSDSSDED
NT seq
8670 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcctatgatggatttttttgatgatgccaatctttttagtgagaccttagaa
ggtttgtcagatgatgcctttgttcaacctggacctgtttcacttgttgatgaattgaat
ttgggtgcagaatttgaacctttgcacatagactcactgaaccatgtgcaagatgctcaa
aatcaacaaaagatgagtgaatttgatcagctgaatcagtatgattcactgaagcttcac
tcagtaaatcagtcttttaatagctcagctgacaatgtcttatcaccacactctcaattc
aattgttcaccagttcatccgcaaaaccagtccaatgggatgtttccagatgtggctgat
ggtagtcccatgtggggtcatcaaactgccacaactgtttcgaatcaaaatgggtcccct
tttcaccaaggacattctcagtctatgcagcaaaacaaaagctttgtagcacaccatgac
tttgccttatttcaggctaatgaaccacagcatcagtgtgcctcgctacggccgcagcag
agcaggaacaacacggggcaggatgctctgagtcagccaaaagacttcatggaagttaac
gtgtctacttccctcagagtcagtgttaaccacccaccttcagtttctaatccatcgact
tcacagcagcctctgtctgttcagcagttttctcaaactgcaagtgcttcaatacatttt
tgtgggaatcaagaaggaaattttgatggacagtcccctactattactccatgttctgtc
agtaacagtcaacaattttcatctccgtattcctactctaataatcacatttctcctacc
agccttcttcagcctacaacagccctttctactagccagcagacacactctatctctgac
ttcactggaagcgatgcctttacatctcaaacagggaccaagcaagaaacaactgagcac
atgttgaatcctaatacacctttgaattcaagtacttttcaaatgttgcattctgcgcat
cctcagggcaactttagtagttcaaaactctctcctgtgaatattaattttccagcttct
actggttctgcttctcagataagccatttcacagaccctattgaaagtaacggttttaca
tctttagatgacaacttacttcatcaggtggagactcacagtgaaccgttcacaggactt
gacccagatgacctcctgcaggaagaccttctgccacagtttgatgactctgcgtttgtt
caggatagcacaagccatgttctagagcatgacctagaacaccacataaccccacagcaa
gtgacaccaccatccgaacccgtccgggccccgtctcagagtcagatccatccttggcat
tctgcagtttccaatcagcacctgcaaggcagaagtcgtgcagccttgcaaggacagcct
ccttccaagaagactgatggttcaggatcatatactaagatgcagaatacccaggtgagg
gcaacgtctgaaaagaagcagaagaaaaaaacagactcagaaagtaaacaagagaaagcg
aatcgcataatatctgaagcaattgcgaaggcaaaagaaagaggagagagaaacattcca
cgcgtaatgagccctgaaaacttccccagtgtttcagctgaaggaaaagaggaaaagaag
ggtagaaaagttaaatccaagccaaaggataaggagtgtaaaaagccgaaaacgggttcc
tcatccaaaattaaggagaaaacaaaaattggaaaactgatcatcacactgggcaaaaag
cagaaaaggaaaaacgaatcttcagatgaattgtctgatgctaagcagactccacagcag
ccactgaaagatgaagagtcacagaagagaagatcaaatcgtcaagttaaaaggaaaaaa
tatgccgaagaaggagaagggaaacaatcagaagaagaagcagctaaagtttctgttaaa
atcaagaagaattctgcccctttacctgctgaacagcctttacaattatttgtggaaaat
ccaagtgaagaagatgcagcaattgtagacaaaatcttatcctccagggtaataaagaaa
gaaatatctgctgggatgacagtagaaacagaagagttttttgtcaaatacaagaactac
tcatatctccactgtgagtgggccacagaacaacagcttttaaaggataaaagaatccag
cagaaaataaagcgattcaaagtaaggaaagcacaaagagctcacttttttgcagatatg
gaagaggaaccttttaatcctgactatgttgaagtagaccgggtattagaagtgtctctt
tgtgaagataaagacactggtgagcctgttatttactatttagtaaaatggtgttcattg
ccatatgaagacagtacgtgggagctgaaagaagatgtagatcaagcaaaaatagaagaa
tttgaacaattgcaagcttccaggcctgactcaaggagattggaccgaccacctccaaac
tcctggaagaagatagaacagtccagggaatataaaaatggcaatcagctcagggaatat
caactggaaggacttaactggctcctattcaactggtacaataggcgaaattgcattttg
gcagatgaaatgggccttggcaaaaccattcagtccattacgttcctgtatgaaatcctc
ctgacgggtataagaggccctttcctgatcatagctccactttccactataacaaactgg
gagagggaattccgcacgtggactgacctgaatgttgtggtgtaccacggcagtatgatc
agcaggcagatgattcagcagtatgagatgtacttcagggactcccagggccgtattgtt
cgaggtacctacaggttccaggccattatcacaacttttgaaatgattcttggtgggtgc
ccagaattaaatgcaattgagtggcggtgtgttattatcgatgaagctcacagactgaag
aacaaaaactgcaaacttttggaaggactaaaattaatgaaccttgagcataaagtgctg
ttaacaggtaccccactgcagaacacagtagaagaattatttagcctccttcattttctg
gaaccattgcgttttcctgctgaatctacattcatgcaagagttcggagaccttaaaaca
gaggaacaggttcagaaactgcaagctatcctgaaacctatgatgctcaggagattaaaa
gaggatgtagaaaaaaagttggctcctaaggaggaaacgataattgaagtagaactaact
aatattcagaagaaatattaccgagcgattttggagaaaaattttgctttcttatccaaa
ggagcagggcaggcaaatgtacccaatctggttaacactatgatggaactcagaaagtgt
tgtaaccacccttatctcatcaaaggtgctgaagagaagatccttggagagtttaaagaa
acatatagtccaagtgctcctgacttccacctgcaagcaatgatccagtctgctggtaaa
ttggttcttattgataagcttcttccaaaaatgaaagcaggaggccacaaggtccttatc
ttctctcaaatggtgcgctgccttgatattttggaggattaccttatacataaaaggtac
ctgtacgagcggatcgacgggcgcgtgcgcgggaacctgcggcaagcggccattgaccgc
ttcagcaagcccgactcggatcgcttcgtcttcctcctctgcaccagggctggcggcctg
ggcatcaacctgactgcagcagacacctgcatcatttttgattctgactggaatccccaa
aatgacctgcaggctcaagcccgatgccacaggattggtcagaacaaagcagtgaaggtc
tacagactgatcacacggaattcctatgagagagagatgtttgacagagcaagtctcaaa
ctgggactggataaggctgtcttgcagagtatgagtggaagagaaaacagtgttggtggt
atccagcaactctccaaaaaagaaatagaagatttgcttcgaagaggtgcctatggggcc
attatggatgaagaggatgaaggctccaagttctgtgaggaagacattgaccagattctg
cagcgtcggactaaaaccatcacgattgaatccgagggaagaggctccacgtttgccaag
gctagttttgttgcatccggaaacaggactgatatttcactagatgatcccaacttctgg
cagaaatgggccaaaaaagcagaaatagatatcgatgctatcagtggtagaaacagcctt
gttattgataccccaagaatcaggaaacaaactcggcccttcagtgcaacaaaggatgag
ctggcagagttgtctgaggtggagagtgagggtgatgaaaaacccaagctgcgccggccg
tgtgaccgctccaatggctatggaaggacagagtgcttccgtgtggagaagaacctgctg
gtctatgggtggggtcgatggagagaaattctgtcccatggtcgcttcaagaggcagctg
aatgaacacgatgtggagataatctgccgagccctgttagcctattgtcttgttcactac
agaggggatgagaaaataaagagttttatatgggatctcatcaccccaacagaggatggg
caaacacgagagttacagaaccaccttggcttatcagctcctgtgcctagaggaagaaaa
ggaaaaaaagtgaagacccaggctagcactttcgatatacacaaagcagaatggcttcga
aaatacaatccagagcatctgttgcaagatgaaggatacaaaaagcacataaaacaccat
tgcaacaaggtcttacttcgagtaagaatgctgtattacttaaaacaagaagtcattggt
agtgaattccaaaaggtctttgatggaactgatgccagtgaaattgatgtttgggttcct
gagccagaccactctgaagttccagctgagtggtgggatgcagatgcagataaatctctt
ctaattggagtttttaaacatggttatgaaaaatacaacactatcagagcagacccagct
ctttgcttcttggaaagggttggaaaaccagatgagaaagcagttgctgctgaacagaga
gcaaatgattatatggatggggatgtagaagatccagaatataaaccagcaccagcactg
ttcaaagatgacatagaggatgatgtttcatccccaggtgatctcgtaatagcagatgga
gacggacaaatgatggaaggggacaaaatctattggcccactcagtctgccttaacaacg
cgtctgcgccgcctgataacagcgtatcaacgtaccagtaaaaacaggcaggcccagcag
ctccagccagcattcccagtacaaaccagtatgatgcagcttccgtatgaagaagctgca
ctaaatccaaagatggctgctaagattgaaagacagcagagatggacaagaagagaagaa
gctgacttttacagagtcgtgtccacatttggagtagtgtttgaccctgaaaggggacgg
tttgactggaccaagtttcgagcgatggctcggctgcacaagaaaactgatgagagcctg
gagaagtacctgtatgcatttatgtcaatgtgcaggagggtctgtcgtctcccctcaaaa
gaagagcttgtggacccaaacatttttatccagcccatcacagaggagcgcgcttcccgg
actttgtaccgcattgagctgctgcggaaagtgcgagaacaggctctcagacacccccag
ctgtttgagcgactaaagctgtgccagccaaacccagacctgcctgtctggtgggaatgt
gggactcatgacagggatttacttattggagctgctaagcatggagttagcaggacagat
tatcatattcttcgtgatcctgaactgtcatttatgcctgcccagaggaactataatcaa
aacaaagtgactctctcaaggacttctactccactcttgcaccagtaccagatggcatta
tctgcttctcctcttacacctcagtcaagattgtcagatgctaaagtgaatgcttttgag
gacacaaaagctaaaaacgaaaatctgaaagaggaccctcagtcttctgaagatgaatct
atgtctacagaggagacacagacaatactgaaatctgaacctttgagtcccaagaatggc
accccaatacaaattacagaccacagacctagcgtgaaggctgagacagacaggcgcatg
gtggcagcaaggacagagcctctaactccaaacccagcttcaaaaaaacagagagtcagc
aaaagggggtctgactctagctctgactcagactctgactcagatagatcatcctgttct
tccaggtcatcatcttcatcctcttcgtcttcctcatcttgttcccactctcgatctggc
tctagctcttcatcatcttcatcttgttcttcagcatcttcatcctcttcctcatcgtcc
tcatcatcatcgtcgtcgtcatcatcatcgtctgaagagagtgatagtgatgaagaggag
gcacagaaacgtgcagaaggaactccacatataaaagcctatgatgaagagagtgtggcc
tctctgagcaccacacaagatgagacacaagacagtttccagatgaacaatgggacacca
aattctggttatctcctacaaggtggatacatgttggctgcatcctactggccaaaggat
cgagttatgattaaccggttggacagcatttgtcagacagtgttgaagggtaaatggcct
tcagcccgaaggagctatgacagcaccacagtggcatcgttctacaccaccaaactcctg
gacagctcaggggcagctgcagagtacagtgagcccagtgcacccacacccccccttgca
gctgtaaaagaagaatatgaccagtctccccagctgtcaaaggtgaagaagcatgtacga
gaaaaggagtttacagtgaaaatcaatgacgaaggtggtttgaaattgacttttcagaag
cagggactgtctcagaaaaggccatttgaaagtgaggagggtgcattgggtcagcagcaa
tatctggctcggctacgtgaactccagaatgcttcagaaaccagccttgtcaacttccaa
aaatcacttcccaaatcaggtacttccagtcatttaacagccagtgccaatggagtcata
gttgacagtcagcctgcagtcaaaaagagacgaggaagaaggaagaatgtggagggggtt
gatgtcctctttatgaatagaaataaacagcctaaccatgttaatccaggtattaactcc
tgccaggttgttgcaggaataaacccagcactcacttacacacagtcccaaggcatgctt
gatgcagagagtccagttcctgttattaacctaaaagatggaacaaggcttgccggtgat
gatgcccctaaaagaaaagatttagaaaggtggcttaaagaacatcctggatatgttgaa
gattcaggagcttgtattcctaggatgcagctgcacgatgggaggcctaaacaaaaaaga
caccgctgtcgaaaccccaataaactggatgttaacagtttaactggtgaagaacgtgtt
cagctcattaatagaagaaatgcaagaaaggttgggggtgcatttgctccccctctgaag
gatttgtgcaggttcttgaaagaaaatccagagtatggagtggctcctgagtggggagaa
gttgtaaaacagtctggcttcctccccgagggcatgttcgagcgcatcctgacgggcccg
gtggtgcgcgaggaggtgagccggcgcggccggcgccccaagagcgaggccgccaaggcc
acggcggcggccgcctcggccggcacggccatcagccccctgctggccaacgggctgctg
ccggccgtggagctgcccggcctgcaggcgctgcagcacaacctgcacaacctgcagtcg
ctgcaggtgacggccggcctgatgggaatgccggccggcctggccgccgcgggagaggcc
aagaacgtggctgccatgttccccatgctgctgtcggggatggctggcttacccaacctg
ctgggcatgggaggactcctgacaaaggcggcagaatccgtgtcggaggagaaaaaggga
aacgattccaaggagacggatacaaagaaagaaaggacagaagaccaaaatacggatact
ggtggtgaaaactctgtttcaagttctccttcaacatcctctgccgctgcagctgccaat
cctctctctcttaaccctttacttttgtccaacatactttacccagggatgcttctcact
ccaggccttaatcttcatatcccagctttgtctcagtctaatattttcgatgtacagaac
agtgaaagcaatgacacaggctcagccaagcccacagaagaaaaggaggaaaattctagg
gttagagatcaggaagacaaagggggaacagagccaagctctcacaatgaaaacagcaca
gatgagggttcagagaaagcagatgcttcatctggatctgacagtacatcgtcttcatct
gaggattcggattcgagcgatgaagactga
DBGET
integrated database retrieval system
