Oenanthe melanoleuca (Eastern black-eared wheatear): 130258025
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Entry
130258025 CDS
T09236
Symbol
TUBB3
Name
(RefSeq) tubulin beta-3 chain
KO
K07375
tubulin beta
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04145
Phagosome
oma04540
Gap junction
oma04814
Motor proteins
oma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130258025 (TUBB3)
09144 Cellular community - eukaryotes
04540 Gap junction
130258025 (TUBB3)
09142 Cell motility
04814 Motor proteins
130258025 (TUBB3)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130258025 (TUBB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oma03036
]
130258025 (TUBB3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oma04812
]
130258025 (TUBB3)
04147 Exosome [BR:
oma04147
]
130258025 (TUBB3)
Chromosome and associated proteins [BR:
oma03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
130258025 (TUBB3)
Cytoskeleton proteins [BR:
oma04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
130258025 (TUBB3)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130258025 (TUBB3)
Exosomal proteins of colorectal cancer cells
130258025 (TUBB3)
Exosomal proteins of bladder cancer cells
130258025 (TUBB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
7tm_1
7tm_4
Misat_Tub_SegII
7TM_GPCR_Srsx
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
130258025
NCBI-ProteinID:
XP_056357017
LinkDB
All DBs
Position
11:complement(959549..964516)
Genome browser
AA seq
1019 aa
AA seq
DB search
MSTLAPLRLLREPSNASEGNQSNATVGASGGWCQGLDIPNELFLALGLVSLVENLLVVAA
ILKNRNLHSPTYYFICCLAVSDMLVSISNLAEMLFMLLLEHGVLVMRPSIVRHMDSVIDM
LICSSVVSSLSFLGVIAVDRYITIFYALRYHSIMTLQRAVVTMASVWLASTVSSTVLITY
FRSNTILLCLIGFFLFMLVLMLVLYIHMFALARHHLHSISSQQKPPTAHRGGSLKGAVTL
TILLGVFFICWGPFFFHLILIVTCPTNPFCTCFFSYFNLFLILIICNSVIDPLIYAFRSQ
ELRRTLREVVTCSLTLWLASGSPGEPRGERSPPVSPVGRGPPAPGGNREGPAGRREAGPH
AGQRAHHRRLCSRAAPAAAHLVTGTGTVPGPAGATGATGTPRAALPHPVPIPPRSGTRSG
GASRVCPPAPPPPPPPPRDAPADAGWSQCPRAGPGVSPLPVGAGVPPGRAPRGCRVPAPP
RRGVAGAGPGGAWRAVPVPQGCCGAAAAAADWLRAAVTSAAGPVRRREPIKDAAAAAPPP
ALPVPLRSGAAPLPAPARSRPAPLRPGRTMREIVHIQAGQCGNQIGAKFWEVISDEHGID
PSGNYVGDSDLQLERISVYYNEASSHKYVPRAILVDLEPGTMDSVRSGAFGHLFRPDNFI
FGQSGAGNNWAKGHYTEGAELVDSVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLL
ISKVREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEALYDIC
FRTLKLATPTYGDLNHLVSATMSGVTTSLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFA
PLTARGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVATVFRGRMSMKEVDEQML
AIQSKNSSYFVEWIPNNVKVAVCDIPPRGLKMSSTFIGNSTAIQELFKRISEQFTAMFRR
KAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEGEMYEDDEEESEAQGAK
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgctggcccccctgcgtctgctgcgcgagccctcgaatgccagcgagggcaac
cagagcaatgccacggttggggccagcggtggctggtgccaggggctggacattcccaac
gagctgttcctggcgctggggctagtgagcctggtggagaacctgctggtggtggccgcc
atcctgaagaacaggaacctgcactcgcccacctactacttcatctgctgcctggcggtg
tcggacatgctggtgagcatcagcaacctggcggagatgctcttcatgctgctgctggag
cacggggtgctggtgatgcgccccagcatcgtgcgccacatggacagcgtcatcgacatg
ctcatctgcagctccgtcgtgtcttccctctccttcctgggggtcattgctgttgaccgc
tacatcaccatcttctatgccctgcgctaccacagcatcatgacgctgcagcgggccgtg
gtcaccatggccagcgtctggctggccagcaccgtctccagcaccgttttgatcacctac
ttccgcagcaacaccatcctcctctgcctcatcggcttcttcctcttcatgctggtcctc
atgctggtgctctacatccacatgttcgccctggcccgccaccacctccacagcatctcc
agccagcagaagccacccactgcccaccgtggtggcagcctgaagggtgccgtcaccctc
accatcctcctgggcgtcttctttatctgctgggggcccttcttcttccacctcatcctc
atcgtcacctgtcccaccaaccccttctgcacctgcttcttcagctacttcaacctcttc
ctcatcctcatcatctgtaactcggtgattgaccccctcatctacgccttcaggagccag
gagctccggcggacgctgcgggaggtggtgacgtgctccttgacgctctggctggcatcg
ggcagccccggggagccccggggggagaggtctcccccggtctcgccggtcggtcgaggg
ccacctgctcccggtgggaaccgggaaggaccggctgggcggcgggaggctggaccccac
gcgggacaaagggcccatcaccgccgcctttgttctcgggccgcgcccgccgccgcccac
ctcgtcactggcaccggcactgtccccggtcccgcgggggccaccggggcgaccgggacc
cccagagcggctctcccgcaccctgtccctatccctccccgttccgggacgcggtcggga
ggggcgtcccgcgtgtgtccccccgccccgccgccgccgccgccgccgccccgggatgct
cccgccgacgcggggtggtcccagtgtccccgcgcgggtcccggggtgtccccgctcccg
gtgggggccggggtgccccccggccgtgccccccgcgggtgccgggtccccgctccgccg
cggcggggcgtggccggggcggggccgggcggggcgtggcgggcggtgccggtgccgcag
ggctgttgcggcgctgcggcggcggccgctgattggctgcgggcggcggtgacgtcagcg
gccggcccggtgcggcggcgggagcctataaaggatgcggcggcggccgcgccgcccccc
gcgctcccggtgccgctccgctccggtgccgctccgctcccggccccagcccgctcccgt
cccgctccgctccggcccggccgcaccatgagggagatcgttcacatccaggcggggcaa
tgcggcaaccagatcggcgccaagttctgggaggtgatcagcgacgagcacggcatcgac
cccagcggcaactacgtgggggactcggacctgcagcttgaacgcatcagtgtctactac
aatgaggcctcttctcacaagtacgtgccgcgcgccatcctggtggacctggagccgggg
acgatggacagcgtgcgctcgggtgccttcggccacctcttccgccctgacaacttcatc
tttgggcagagcggtgccgggaacaactgggcaaaggggcactacacggagggggccgag
ctggtggactcggtgctggatgtggtgcggaaggagtgtgagaactgcgactgcctgcag
ggcttccagctgacccactcgctgggcgggggcaccggctcgggcatgggcacgctgctg
atcagcaaggtgcgggaggagtaccccgaccgcatcatgaacaccttcagcgtggtgccg
tcccccaaggtgtcggacacggtggtggagccctacaacgccacgctctccatccaccag
ctggtggagaacacggacgagacgtactgcatcgacaacgaggcgctctacgacatctgc
ttccgcaccctcaaactggccacccccacctacggcgacctcaaccaccttgtctcggcc
accatgagcggcgtcaccacctccctgcgcttccccggccagctcaacgccgacctgcgc
aagctggccgtcaacatggtgcccttcccgcggctgcacttcttcatgcccggcttcgcc
ccgctgacagcacgtggcagccagcagtaccgcgccctcaccgtgcccgagctcacccag
cagatgtttgatgccaagaacatgatggccgcctgtgacccccgccatggccgctacctc
accgtggccaccgtcttccgtggccgcatgtccatgaaggaggtggatgaacagatgttg
gccatccagagcaagaacagctcctactttgtggagtggatccccaacaatgtcaaggtg
gccgtgtgtgacatcccgccacgggggctgaagatgtcctccaccttcatcgggaacagc
acggccatccaggagctcttcaagcgcatctcggagcagttcacagccatgttccgccgc
aaggccttcctgcactggtacacgggcgaggggatggacgagatggagttcaccgaggct
gagagcaacatgaatgacctggtgtccgagtaccagcagtaccaggacgccacggccgag
gaggagggtgagatgtacgaggacgacgaggaggagtcggaggcgcagggcgccaagtga
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integrated database retrieval system
