Oenanthe melanoleuca (Eastern black-eared wheatear): 130258120
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Entry
130258120 CDS
T09236
Symbol
RAD54L2
Name
(RefSeq) helicase ARIP4 isoform X1
KO
K10876
RAD54-like protein 2 [EC:5.6.2.-]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oma03400
]
130258120 (RAD54L2)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130258120 (RAD54L2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
RDD1
AAA_22
Motif
Other DBs
NCBI-GeneID:
130258120
NCBI-ProteinID:
XP_056357189
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Position
12:15992764..16060176
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AA seq
1473 aa
AA seq
DB search
MSDESISGSDPDLDPDLEQEDMEEEEEEDEEEAMEEDNDGDDEEDLLDESDQPQDAVFSG
DHAEHAEDGEWQRSTSTTSSQSERAEQLLQNQHKSLASEDTKKKRAQKPSHMRRNIRKLL
REDQLEAVTKAAQQEELERRKRLEQQRKDYPASIPTVPLEFLPEDIVFRTAEATQLPPQV
LAEEVICLDSTSSGSEDDTKGKNSIKDEVIELSSGEDDALQIVDSSDSGNEGEEDGSEES
SGSHVNDALNQSDALGQVIVNINHPPNEEDIFLAPQLAHAVKPHQIGGIRFLYDNLVESL
ERFKTSSGFGCILAHSMGLGKTIQVISFLDVLFRHTEAKTVLAIVPVNTLQNWLAEFNMW
LPAPENLPADYNSKEVQPRTFKVHILNDEHKTTAARAKVVNDWVTEGGVLLMGYEMYRLL
SLKKSFATGRKKRTKKQTGPVIIDLDEEDRQQELLKGIEKALSRPGPDVVICDEGHRIKN
CHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGSRQEFSNMFERPILN
GQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHNVLKVQLPSKEEHVILVRLSKIQRAL
YTEFMNRFRDAGNSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVDDLGT
ANTNSRCQPQGIKVKTESNALASPVGEATNSKFLQSVGFNPFQERANQVVTYEWAKDILC
DYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLSVIEEFLAKRPMPSPPGSDG
GVHNWVRNINYYRLDGSTSASERERLINQFNDPSNTSVWLFLLSTRAGCLGVNLIGANRV
VVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVSDYTLEKKIYDRQISKQGMSDRVVDD
LNPVLNFTRREVENLLHFVEEESDPAQLSLNPSKMKESVLQLACLKYPHLITKEPFQHES
LLIDRKEHKLTKAEKKAAKKSYEEEKRASVPYTRPSYAQYYPASDQSLTSIPAFSQRNWR
PALKGEDKPVASVRPVQSTPIPMMPRHVPMGSAGSASSSNPAVNFPINYLQRAGVFVQKI
VTTTDIVIPGTNTSTDVQARISAGESIHIIRGTKGTYIRTSDGRIFAIRTTGKPKGNEDR
RTAASGSQSSSLESTSNGRHSASSPQLPSAEELTRPISPDSPEIISELQQYAEAAAARES
RHGSPSTAAAQPHGTRTEPTPGAARGTEQRLGAPCTAPSVSSALPAASQHGDAHPVLDLR
GNKRKSTSPSAAEEQSRRQQKKRQLPSSVQPYEHGYPVSGGFTMPPVSLNHNLTHPFASQ
PGNSLYMGTGSSYYQLPNLLPDPHLVFPVTTDPLLTAGTASSSAATSATASVPSFMLNPS
LAGVLPNYSLPFTQSLLPEPRMFAPFPAPILPSSLPRSMASAYPGYVSPHSGYPAGGLLR
SQVPQFETQEVPEVGCSSNDEDKDDDVIEITGK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgagtcaatctcagggagtgatccggacctggacccggacttggagcaggag
gatatggaagaggaggaggaggaagatgaggaggaggcgatggaggaggacaatgatggg
gatgacgaggaggacttacttgatgaaagtgaccaaccccaggatgccgtgttcagcggt
gaccacgcagagcatgcggaggatggagaatggcagcgctcgacttcaactacctcatct
cagagcgagcgggcagagcaactcttgcagaaccagcacaagagcctggcctctgaggac
accaaaaagaagagggctcagaaaccgtctcacatgcggaggaacataagaaagctgttg
cgtgaggaccaactggaagccgtgacaaaggcagcccagcaggaagagctggagagaagg
aaacggcttgagcagcagcggaaggattatccagcctctataccaactgtacccctggag
tttcttcctgaggacattgttttcagaacagcagaggcaacccagctcccccctcaggtc
ctggctgaggaagtgatctgcctcgacagtaccagcagtggcagtgaggatgatactaaa
ggaaaaaatagcattaaagatgaagtgattgagctgagctcaggagaggatgatgccctc
caaattgtggacagcagtgactctggcaatgagggggaggaggatggcagtgaagagagc
agtggctctcatgtgaatgatgccttaaatcagtcagatgctctggggcaagtcattgtc
aacatcaatcatccaccaaatgaggaggacattttcctagctccccagctggcacatgca
gtaaaacctcatcagattggtgggatccgattcctttatgacaacttggtcgagtccttg
gagagatttaaaaccagcagtgggtttgggtgtattttagcacatagtatgggcctgggc
aagaccatacaggtcatctctttcttggatgtactttttcgtcacacagaggcaaagact
gttcttgccattgtacctgtgaatacgctccaaaactggctagcagagttcaacatgtgg
ctcccagcacctgaaaaccttcctgctgattataactccaaagaggtccagccccgcacc
ttcaaagtccacatcctgaatgatgaacacaagacgacagctgcacgtgcaaaggtggtg
aatgactgggtgacagaaggtggtgtgctgctgatgggatacgagatgtaccgtctgctc
tcactgaagaagtcctttgccactggtaggaagaagagaacaaagaaacaaactggtcct
gtcattattgacttggatgaggaagaccggcagcaggagcttctgaaagggatcgagaag
gctttgtctcggcccggcccagatgtggttatttgtgacgagggacaccggataaagaac
tgccacgccagcacttcccaggccctgaagaacatccgctcgcgccggcgggtggtgctg
acggggtacccgctgcagaacaacctcatcgagtactggtgcatggtggactttgtgcgg
cctgacttcctgggctcgcggcaggagttcagcaacatgtttgagcggcccatcctgaac
gggcagtgcattgacagcacgccgcaggacgtgcggctgatgcgctaccgcagccacgtc
ctgcacagcctgctcgagggcttcgtgcagcggcgaggccacaacgtgctgaaggtgcag
ctcccatctaaggaagaacatgtcattctggtacgtctgtccaagatccagcgggccctt
tacacggagttcatgaaccggttccgtgatgcaggcaacagtggctggctggggctgaac
ccactcaaagctttctgtgtctgttgtaagatctggaaccatccagatgtgttgtatgaa
gctctgcaaaaagagaatctggcaaacgagcaggatttggatgtggatgaccttggcaca
gcaaacactaattcccgctgccagcctcagggaattaaagttaaaacagagagtaacgct
ttggcatcaccagttggagaagctactaatagcaagttcctccagagtgttggcttcaac
ccttttcaggaaagagcaaatcaggttgtaacttatgagtgggccaaagacatcttgtgt
gattaccagacgggagtcctggagaactcacccaagatggtgttacttttccacctaatt
gaggaaagtgtgaagcttggagacaagatcttggtcttcagccagagcttgtccacctta
tccgtcattgaagagtttttggcaaagagaccaatgccaagtcctccaggctcagatgga
ggagttcataactgggtccgaaacatcaactactacaggctggatggcagcacctctgcc
tcagaaagggaacggctgattaaccagttcaatgatcccagcaacacctctgtttggctc
ttccttttgtccacacgtgctgggtgtttgggtgtcaacctcattggagcaaacagagtg
gtggtgtttgatgcttcctggaacccgtgccacgacgcccaggccgtgtgtcgcgtgtac
cgctacgggcagaagaagccgtgccacatctacagactggtttctgattacaccctagag
aagaagatctatgaccgtcagatctccaagcagggcatgtcagatcgggtggtggatgat
ctgaacccagtgctgaacttcactcgacgggaggtggagaacctgctgcattttgtggaa
gaagaatctgaccctgctcagctctccctcaatccaagcaagatgaaggagtctgttcta
caattagcctgtctcaagtatcctcacctcatcaccaaggagccttttcagcacgagtca
ctgctgatcgaccggaaggagcacaagctgaccaaggcagagaagaaagcagccaagaag
agctatgaggaggagaagcgagcgtccgtcccctacacccggccgtcctacgcacagtat
tacccagccagtgaccagagtctgacgagcatccctgcctttagccagagaaactggcga
ccagccctcaagggtgaagacaaaccagtggcaagcgtccgcccagttcagtccactccc
attccaatgatgccccgccatgtccccatgggcagtgcaggatcagcctcaagttccaac
cctgctgtcaactttcccatcaactacctacagcgagctggtgtctttgtgcagaagatt
gttaccaccacggatattgtgattccgggtacaaacacatccactgatgtacaagcaaga
atcagtgctggtgagagcatccacatcatcagagggacaaaagggacgtacatccggacc
agcgacggtcggatctttgccatacggaccactgggaagccaaagggcaatgaagaccgt
cggacagctgcctcaggctcccagagctcttccctggagtccacgagcaatggcagacac
agtgcctcatccccgcagctgcccagcgccgaggagctgactcggcccatctcccccgac
agccccgagatcatcagcgagctgcagcagtacgcggaggcggcggcggcgcgcgagtcc
cgccacggctctcccagcacggccgcggcgcagccgcacggcacccgcaccgagcccacg
cccggcgccgcccggggcaccgagcagcgcctgggggctccctgcacggctccctccgtg
tcctcggccctgccggccgccagccagcacggcgacgcccacccggtgttggacttacgg
ggcaacaagcgcaagtcgacgtcgccgtcagctgcggaggagcaatcgcggaggcagcag
aagaagcgccagttgccgtcgtccgtgcagccgtacgaacacgggtaccccgtttctggt
gggttcaccatgcctcctgtctctttaaaccacaacctaacccatccatttgcctcccag
ccaggaaactccttgtacatgggcactggctcctcttattaccagctgcccaatttactc
ccagaccctcatctggtgttccctgtgactactgaccctctgctgacagccggcaccgcc
agctcttctgctgctacctcagccaccgccagcgtcccctcattcatgctaaacccttct
ctggcaggggtgctgcccaattactcgcttcccttcacgcagtcactcctgcccgagccc
aggatgttcgctcctttcccagcccccatcctgcctagcagccttcccaggagcatggca
tctgcctaccctggctacgtgtcccctcactcgggctacccggctgggggtctccttcgg
tcccaggtgcctcagtttgaaacccaggaggtcccagaggtgggatgcagctctaatgac
gaggacaaagacgacgatgtcatagagatcacagggaaataa
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