Oenanthe melanoleuca (Eastern black-eared wheatear): 130258178
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Entry
130258178 CDS
T09236
Symbol
USP4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oma01002
]
130258178 (USP4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oma04121
]
130258178 (USP4)
Enzymes [BR:
oma01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
130258178 (USP4)
Peptidases and inhibitors [BR:
oma01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
130258178 (USP4)
Ubiquitin system [BR:
oma04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
130258178 (USP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
130258178
NCBI-ProteinID:
XP_056357294
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All DBs
Position
12:complement(13431178..13462202)
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AA seq
955 aa
AA seq
DB search
MDMAAAAAAGGERARPDPAEQRAELGPLLATALRPGESWYLVESRWFKQWKKYVGFDSWD
MFGAGDPNLFPGPVDNAGLFPGPIDNSGLFGDPETQSLKEHLIDELDYVLVPTEAWNKLV
AWYGCIDGQKPIVRKVVEYGLFVKHYKVEVYLLELKLCESSDPDNVISCHFSKADTVATI
EKEMRKLFNIPAEKETRLWNRYMSNTYEQLSKLDSTVQDAGLCQGQVVLIEVKNEDGTWP
GQHCLAKSSTATSRNFTTSSKSSASSYSSVSATSVITNGDSSNSYGLNSSHLGRGGSGFV
CNSYNCRDSASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINQNNP
LGMRGEIAEAYADLIKQMWSGRQSHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDG
LHEDLNRVKKKPYLELKDANGRPDSEVAKEAWENHRLRNDSIIVDIFHGLFKSTLVCPKC
SKVSVTFDPFCYLTLPLPLRRDRLMEVTLVYADPQRRPVQYRVVVPMMGAISDLCESLSK
LSGVPAENMVVTDVYNHRFHKIFQMDEGLNHILPKDDIFVYEVCKPSEDGSEYVTLSIYF
REKTMRQSSNTSGTVLFGQPLLISVPKHKLTVDHLYSVVLEQISRCVKLPLAEEYSTPYP
DRGTCNGSNGVVEGDIEEMEHQDGGDEGKEKVTEVDPCHSEGCMQVESARDLQPCKKQHF
TFSLVNSSGTSEINSIVEGKILKLNAFSAVAIDWDSETRRLLYDEQEAQAFEKHGSMLQP
QKKKAVVALRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPRILVVHLKRFS
YSRYWRDKLDTVVEFPIRGLNMSEFVCDPRAGSYVYDLIAVSNHYGAMGVGHYTAYAKNK
VNDKWYYFDDSSVSVASEDQIVTKAAYVLFYQRRNSEEHSAHSAPQEECDGMDTN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggacatggcggcggccgccgcggccggcggggaacgggcccggccggacccggccgag
cagcgggcggagctggggccgctcctggccacggccctccggcccggcgagtcctggtac
ctggtggagagccggtggttcaaacagtggaagaagtatgtgggctttgacagctgggac
atgttcggcgccggcgatcccaacctcttcccgggccccgtcgacaacgcgggcctgttc
ccggggcccatcgacaactcgggcctgttcggcgatccagaaactcagagtttaaaagag
cacctcattgatgagctggattacgtgttggtgcccaccgaagcctggaacaaactagta
gcgtggtatggctgcatagacgggcagaagcctattgtgaggaaggtggtggagtacggg
ctgtttgtgaagcactataaggttgaggtttatctcctggagctgaagctgtgcgagagc
agtgatcccgacaatgtcatcagctgccacttcagcaaggcagatactgttgctaccatc
gagaaagaaatgagaaaactattcaatatcccagctgagaaggaaaccaggctatggaac
aggtatatgagtaacacttacgagcagctcagcaagctggatagcacagtgcaagatgca
gggctctgtcagggtcaggttgttttaatagaagtgaaaaatgaagatggcacatggcct
ggacaacattgcctggcaaaatcaagcactgcaactagcagaaactttactacctcttca
aaatcatcagcaagttcttattcctcagtgtctgccacttctgtcattactaacggtgat
agcagtaactcctatggactgaacagctcccacctgggcaggggaggttctggatttgtc
tgtaactcttacaactgcagggacagtgcttctctgtcacaacctggactctgtggactc
agtaaccttggaaacacctgcttcatgaattctgcattacagtgcctgagcaatactcct
cctctgactgactacttcctggaagataaatatgaagctgaaataaatcagaataaccca
ctggggatgaggggagaaattgcagaagcatatgcagatctcattaaacagatgtggtcc
gggagacagtctcatgtggccccacgtatgtttaaaacacaggttggacggtttgctcct
cagttttcaggataccagcagcaggattcccaggagctcctggcttttctattagatggc
ttgcatgaggatttgaacagagtgaagaagaagccctacttggagctgaaggatgccaat
ggcagacctgattcggaggtggcaaaagaggcgtgggagaatcataggctgaggaatgat
tccatcattgtggatatttttcatggtcttttcaagtctacccttgtttgtcccaaatgc
tccaaagtttctgtgacctttgatcccttctgttacttaactctcccactgcccttgagg
agggatcgtctcatggaagttaccttggtatatgcagacccacagcgcagacctgtccag
taccgggttgtggtgccaatgatgggggccatctcagatctgtgtgaatcactttccaaa
ctctctggtgttcctgcagaaaatatggtggtgacagacgtgtataatcaccgattccac
aaaatcttccaaatggatgaaggtttgaatcatatcttgccaaaagacgacatctttgtg
tatgaagtgtgcaagcctagtgaggatggctcagagtatgttactctctccatttatttt
cgggaaaagacgatgaggcaatccagcaatacttcaggaactgtgctctttgggcagcca
ctgttaatatctgtgcccaaacacaagctcactgtggatcacctctacagtgtagttttg
gagcagatcagccgctgtgtgaaacttcctctggcagaagaatactccacaccctaccca
gacagaggaacctgcaatggctccaatggtgtggttgaaggtgacattgaagagatggag
catcaggatggtggagatgaaggcaaggaaaaagtgacagaagttgatccctgccactct
gagggctgtatgcaagtggagtcagcaagagacctgcagccttgcaagaaacagcatttc
acttttagccttgtgaattcctctgggacctcagagataaactccattgttgaaggaaaa
atcttaaaactgaatgctttttctgcagttgccattgattgggattctgagacacggagg
ctactttatgatgaacaggaggcacaggcatttgaaaaacatggaagcatgctacaacca
cagaagaagaaggctgtagtagccctcagagactgcatagagctcttcactactatggaa
acacttggtgaacatgacccgtggtactgccctaactgtaagaaacatcaacaggccaca
aagaaatttgacttgtggtctttgcccaggattttggtggtacatttaaaacgcttctcg
tacagcagatactggagggataaacttgacactgttgtggaattccccatcaggggtttg
aacatgtccgagtttgtctgtgacccaagagcaggctcatacgtgtatgacctcattgca
gtttccaatcactatggagccatgggagtgggccactacactgcctatgctaagaacaag
gtgaacgacaagtggtactacttcgacgacagcagcgtctcggtggcttcagaagaccaa
atagtgacaaaagccgcgtatgtgctgttctatcagcgccgaaacagcgaggaacattct
gcccactctgctccccaagaagagtgtgatggcatggacaccaactga
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