Oenanthe melanoleuca (Eastern black-eared wheatear): 130258391
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Entry
130258391 CDS
T09236
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04810
Regulation of actin cytoskeleton
oma05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130258391 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130258391 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oma03019
]
130258391 (CYFIP1)
Messenger RNA biogenesis [BR:
oma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130258391 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
130258391 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
130258391
NCBI-ProteinID:
XP_056357688
LinkDB
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Position
1:79762779..79834909
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AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYASLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaagtaactctggaggatgccttgtccaatgtggatctcttggaggaacta
ccattgccagatcagcaaccatgtattgagcccccaccatcatctcttctttaccagcca
aacttcaacactaattttgaagacagaaatgcatttgtcactggtattgcaagatacatt
gagcaagctacagtccattctagcatgaatgaaatgttagaagaaggtcaggaatatgca
atcatgttatacacatggagaagctgctcaagagccattccccaggtcaagtgcaacgag
cagcctaacagagtagaaatttatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgcaattgaacggttttgtggggaggtg
agacgcctgtgccacgcagagagaaggaaggactttgtgtctgaagcctatctgatcaca
ctgggcaaattcatcaacatgtttgcagtgttggatgagttgaaaaatatgaagtgcagc
gtgaagaacgaccactcagcctacaagcgagctgctcagttcctgaggaaaatggcagat
cctcagtccattcaagaatctcagaacctttccatgtttcttgccaaccacaacaagata
acacaatctttgcagcagcagttggaggtcattgttggctatgaagagctgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaacacccagtgagaaa
catatgcttttgaaagtgatgggctttggattatacctgatggatggaagtgtcagtaac
atctataagttggatgcaaagaaaagaataaatttagccaagatagacaagtactttaag
cagttgcaagttgtcccactgtttggtgacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaggaaaataaatccaggtggacatgcacatcttccggcagcagt
ccccagtacaatatttgtgagcagatgatccaaatcagagaagaccatatgcgtttcata
tctgagctggctcgttacagcaacagtgaggtggtgactgggtctggtcgacaagaagct
caaaaaacagatgcagaatatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagtgctcatgtcatggaagtgtactcgtggaaactggttcacccaact
gacaaatactctaataaagattgtcctgacaatgcagaagagtatgaaagagcaacaaga
tacaattatactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaggtgctgatggggcgaatggaaagtgttttcaatcatgccattcgtcatacaatt
tatgcagctcttcaggactttgcccaggtcacacttagggaaccattaagacaagccatt
aaaaagaagaaaaatgtcattcagagtgttttgcaggccatcaggaagacagtgtgtgac
tgggaagcaggtcacgagccattcaatgacccagctctaaggggagagaaggaccccaaa
agtggttttgacatcaaagtcccaagacgtgcagttggaccctccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaattccatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaacgctgcagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcttagagctgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattttgacagatcatattttggagacaaaggaggcatcaatg
atggagtatgttctgtattctttggacctttataatgacagtgctcattatgcacttacc
aaatttaagaagcagttcctctatgatgaaattgaggcagaggtaaacctgtgttttgac
caatttgtctacaagctggcagaccaaatatttgcatactacaaggcaatggctggcagc
ctgcttctggataaacggctgcgatcagagtgcaagaaccagggagcaaccattcagctg
ctgcagtccaaccgctacgagacactgctgaaacagagacatgttcaactcctgggtcgg
tccatagacctgaaccgcctgatcactcagcgcatttcagcagccatgtacaggtcgatg
gaactggccatcggccgatttgagagcgaggatttgacctccattgtggagctggatggt
ttgatagagataaacaaaatgactcacaagcttctgagtagatatatgaccttggacagc
tttgatgccatgttcagagaagccaatcacaatgtgtcagccccttatggcagaattact
cttcatgtcttttgggagctcaattatgatttccttccaaactactgctacaatggatct
actaacagatttgttcggacggtgctgccattttctcaggagtttcagcgtgataagcag
cctaatgcacagccacagtatctctatggatcaaaggctttgaatttggcatattccagc
atttacagcaactacaggaattttgttggtccccctcactttaaagtaatttgtagactt
cttggatatcagggcattgctgtggtgatggaggagttgctgaaagttgtcaagagcctg
ttacaagggaccattcttcagtacgtcaagaccctaatggaagtgatgcctaagatctgt
aggttaccaagacatgagtatggttctccaggtatcttggagttttttcaccatcagttg
aaggacattgttgaatatgcagaactgaaaactgtctgcttccagaatttacgggaagtg
ggaaatgctgtcctgttttgcctcctcattgaacagagcctgtctctagaggaagtgtgt
gacctgttgcacgcagcgccgttccagaacatcctgcccagggttcacgtcaaagagggt
gaaagacttgatgctaaaatgaagagactggaatcaaaatatgcttcactacatttggtt
cctctcattgaaagacttggcacaccccagcaaattgcaatcgcacgggagggggacttg
ctgaccaaagagcgcctctgctgcggcctgtccatgtttgaggtgatcctgacgaggatc
cgctccttcctggacgatcccatctggcgcgggcccctgcccagcaacggggtgatgcac
gtggatgagtgtgtggagttccatcgcctctggagcgcgatgcagttcgtctactgcatc
cccgtgggaacacacgagttcactgtggagcagtgctttggggatggcttgcactgggct
ggttgtatgatcatcgtgctgctgggacagcagcggcgctttgatgtgttggatttctgc
taccacctgctgaaagtccaaaagcacgatggcaaagatgaagttatcaagaatgtgcct
ttgaagaaaatggttgagagaattcgcaagttccagattctgaatgatgaaataattgct
attttggacaagtatttgaagtctggtgatggagagagcacacctgtggaacacgtgcgc
tgcttccagccaccaattcatcagtcccttgccagcaactag
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