Oenanthe melanoleuca (Eastern black-eared wheatear): 130258448
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Entry
130258448 CDS
T09236
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K06243
laminin, beta 2
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130258448
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130258448
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
BRE1
F5_F8_type_C
LXG
Motif
Other DBs
NCBI-GeneID:
130258448
NCBI-ProteinID:
XP_056357803
LinkDB
All DBs
Position
12:complement(8632061..8645629)
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AA seq
1824 aa
AA seq
DB search
MDLLVLAFLLVGGLVAGDWQEPDLSHGCARGSCYPATGNLLVGRATRLSATSTCGLDGPQ
EYCIVSHLQDSEKCFTCDSRDPSLPESHRIENVIYLSSPHDQRTWWQSENGVEHVSIRLD
LEGEFHFTHLIMKFKTFRPAAMLVERSADFGRTWKVYRYFAYNCSKLFPGVRTHPLGRVD
EVLCDQRYSEIEPSSHGEVIFKVLDPSIPVADPYSPEIQELLRVTNLRVNLTKLHTLGDN
LLDSRWEVLQKYYYAVDELVLRGSCFCHGHAAHCAPAPGAPTPSVPGMIHGHCVCEHHTQ
GLNCERCEDFYQDLPWRPAEGSSTNACRRCDCNEHSRQCHFDMAVFLATGNTSGGVCDDC
QHNTMGRHCHLCKPFYYRHPRSDIRSPTACAPCDCDPAGSLDGGACDGHTDVALGMIAGQ
CRCKENVAGPRCDRCRHGAYGLSHGDPQGCQSCRCDPRGTVVGSSPCDPISGDCYCKRFV
AGRSCSQCVPEFWGLSYDLGGCRPCACDFGGAYNNRCSMEDGACPCRPHIMGRQCDQVQP
GFFCAPLDYYTYEAEQATSHGPSHPQLPGAIRAEVPQDCLEYDTREPAGRKGRSRHQPRA
PQPPVPSRRSRQQPLKPDVEEVVRDGAGRMVTWTGSGFARVRDGAGLTFRVDNVPYPMDY
ELLLRYEPESAEDWEAVVSVSSRVLPTSSRCGNLLPSEQMYRESLPHSQRYVLLSRPFCF
EPSTPYEVTMRLQRAGVTQRHPSAFILIDSLVLLPRVSELPGFHGAEAAVRQEELERYQC
LEVFRMAPPHPLAQACARLVCSISALMHGGALPCQCDPQGSLSNECQVQGGQCECKPHVI
GRRCDHCSPGSYGFGPLGCSPCTCSPEGSVSQLCDQVSGQCRCQPGTVGRQCDQCQPGHW
GFPACRPCQCNGHAEECDPRTGTCLRCRDHTSGRHCERCQDGYYGNPVLGSGQQCRPCPC
PGYPGTRHYHGTACHADNETHHIVCLCAPGYAGPRCDRCSPGYFGAPEMEGGECRPCQCN
NNIDTSDPEGCDPRTGQCLRCLYHTTGPHCAQCQPGYYGNALKRSCRRCGCDPRGTLASH
CTNGTCDCDRGTGACACQPNVVGKSCDRCAPHFWNLGGSRGCEPCGCHPIHALHPACDTV
TGQCHCRPGFGGRVCSQCQEHHWGNPEQECQACECEPLGSESPECEQDNGQCRCRLGFGG
LRCDRCQRGYQEPFPHCSPCHPCFGHWDLAVGSLREGLQRLGAQVQALREGGSALPLSPR
RLRELEEALGHVEQLLGDGDSPVGPLLDGLPRQLGGTRMELDNFWKHLQEVERHLDQLVQ
ADTQQHEQLAELSRELGGLNRTASHLQTLLSTVASAGFSESYRRILASLEASRQAEVVAN
GTAGELRRAQMTQRETERLLRQRGNTFRRGTAAARKSLREAQKRVMGLNVTGINEKICGA
PGDRSCEHASCGGALCRNSAGKRHCGGTGCAGALPISARALSSAQNASQQLEVALGQLGV
VAQKMQEVQELARGARSRAEEALGRSQAARSHAEKATAQLRDFIRRIKAFLAEEGADPGS
IELVARQVLNISLPSSPEQIQQLLWEMRESISQLEGVDAVLKSTAEGLAVARDLLAQGQE
ARQRAEGIRDELVGTQQALEVARTQAMTARSTLQSARDAIQVAENRAKEAERSLRVLDRK
ESQAQRRLRELAQLITALQESSQDARHMAQQAKDGAQRATTTSGMLSQDLAQVTQRYVVL
KNRVGLLDRVSGGALQRVSQLMAEAQDLLDKASNSKRKLEDLEQRFGANERTMAAKVTRL
QALEQQVTGLLQEIRERANAYATC
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
atggacctcttggtgcttgctttcctcctggtggggggactggtggcaggggactggcag
gagcctgacctgagccatggctgtgcccgtggcagctgctacccagccactgggaacctg
ctggtggggcgagccacccgtctgagtgccacctccacctgtgggctggacggaccccag
gagtactgcattgtcagtcacctccaggactcagagaaatgtttcacctgtgactcacgt
gacccatccttgcctgagagccaccgcatcgagaatgtcatctacctgagcagcccccat
gaccagcggacctggtggcagtcggagaatggtgtggagcacgtcagcatccgcctggac
ctggagggcgagttccacttcacccacctcatcatgaagtttaaaaccttccgccccgcg
gccatgctggtggagcgttctgccgactttgggcgcacctggaaggtgtatcgatacttt
gcctacaactgctccaagctcttccctggagtccgcacccaccccttggggcgagtggat
gaggtgctatgtgaccagcgttactctgagatcgagccctccagccatggggaggtcatc
ttcaaggtgctggacccctccatccctgtagcagatccctacagcccagaaatccaggag
ctgcttcgtgtcaccaacctgcgtgtgaacctcaccaagctgcacacgctgggggacaac
ctgctggactcacggtgggaggtgctgcagaagtactactatgctgtggatgaactggtg
ctgcgtgggagctgcttctgccatggccacgctgcccactgtgccccagcaccgggtgcc
ccgacaccctctgtccctggcatgatccacgggcactgtgtctgcgagcaccacacacag
gggctgaactgtgagcgttgtgaggacttctaccaagacctgccctggcgcccggccgag
ggctccagcaccaacgcctgtcgccgctgtgattgcaatgagcactcacggcagtgccac
tttgacatggctgtgttcctggccacggggaacaccagtgggggtgtgtgtgatgactgc
cagcacaacaccatgggccgccactgccacctctgcaaacccttctactaccggcaccct
cgctccgacatccggtcccccactgcctgtgccccgtgcgactgtgacccggcaggctcg
ctggatggaggtgcctgcgatggccacacggacgtggcgctgggcatgatcgcgggacag
tgccgctgcaaggagaacgtggccggtccccgctgcgaccgctgccggcacggagcctat
ggcctcagccacggcgacccacagggctgccagtcatgcaggtgtgacccacggggtacg
gtggtgggcagctccccgtgtgaccccatcagtggggactgctactgcaaacgctttgtg
gctgggcgctcctgcagccagtgtgtgcccgagttctggggtctgagctacgacttgggg
ggctgccggccctgcgcctgtgacttcgggggagcctacaacaaccggtgctccatggag
gatggggcatgtccctgccgtccccacatcatggggcggcagtgtgaccaggtacagccc
ggcttcttctgtgcccctcttgactactacacctatgaggctgagcaggccactagccat
ggccccagccaccctcagctcccgggtgccattcgggcagaggtgccccaggactgcctg
gagtatgacaccagggagccggcgggacggaagggacgctcacggcatcaaccccgtgct
ccccagccccctgtcccctcgcgccgcagccgccagcagcccctcaagccggatgtggag
gaggtggtgcgggacggtgccgggcgcatggtgacgtggacgggctcggggttcgcccgg
gtgcgcgatggggctggcctgaccttccgcgtggacaacgtgccctaccccatggactac
gagctgctgctgcgctatgagcctgagtcagccgaggactgggaggccgtggtcagtgtc
agctcccgggtgcttcccaccagctctcgctgtgggaacctgctgccctccgagcagatg
taccgcgagagcctgccccacagccagaggtatgtgttgctgtcccgccccttctgcttc
gagcccagcaccccttacgaggtgaccatgcggcttcagcgggctggtgtcacccagcgc
caccctagtgccttcatcctcattgactcgttggtgctcctgccacgcgtgtcagagttg
ccagggttccatggggcagaggcagcagtgcgccaggaggagctggagcggtaccagtgc
ctggaggtgtttcggatggccccccctcatcccctggcccaggcctgtgcccgcctggtc
tgcagcatctcagccctgatgcacggcggggcactgccctgccagtgcgacccacagggc
tccctcagcaacgagtgccaggtacagggcgggcagtgtgagtgcaagccccatgtcatc
ggccgacgctgtgaccactgttccccaggcagctacggcttcgggcccctgggatgcagc
ccctgcacctgctctccggagggctcggtgtcccagctgtgtgaccaggtgagcgggcag
tgccggtgccaacctggtaccgtgggccggcagtgtgaccagtgccagcccggccactgg
ggcttccctgcctgccggccctgccagtgcaatgggcacgctgaggagtgcgacccccgg
acgggcacctgtctgcgctgccgcgaccacacaagtggacggcactgtgagaggtgccag
gatggttactatgggaaccctgtgctgggctcagggcagcagtgccggccctgcccctgc
cctggctaccctggcacacggcattaccacgggactgcctgccatgccgacaatgagaca
caccacatcgtctgcctctgtgcccctggatatgcagggccccgctgtgaccgctgctcc
cctggttactttggggctccggagatggagggaggggagtgccggccctgtcagtgcaac
aacaacatcgacaccagcgacccggagggctgtgacccccgcacgggacagtgcctgcgc
tgcctgtaccacactactgggccacactgtgcccagtgccagcctggctactacggcaat
gccctgaagcgtagctgccggcgctgtggctgtgacccacggggtacactggcctcccac
tgcaccaatggcacctgcgattgtgaccgtggcacaggagcctgtgcctgccagcccaac
gttgtgggcaagagctgtgatcgctgcgcaccccacttctggaacctgggggggtcaagg
ggctgtgagccctgtggctgccaccccatacacgccctgcaccctgcctgtgacacagtg
acagggcagtgccattgccggcctggcttcgggggtcgtgtctgttcccagtgccaggag
caccactggggaaaccccgagcaggagtgccaagcctgtgagtgtgagccgctgggttct
gagagcccagagtgtgagcaggacaacgggcagtgccggtgccggctgggattcggggga
ctgcgctgtgaccgctgccagcggggctaccaggagcccttcccccactgctcaccctgc
cacccttgctttgggcactgggacctggctgtgggcagcctgcgggaagggctgcagcgc
cttggggcacaggtgcaggcactgagggagggaggatctgcactcccactcagcccccgt
cgcctgcgggaactggaggaggctctggggcacgtggaacaactgctgggagatggagac
agccctgttggtcccctccttgatggactgcccaggcagctgggtggcaccaggatggag
ctggacaacttctggaagcacctccaagaagtggagcgacatctagaccagctggttcag
gcggatacgcagcagcatgagcagctagctgagctgagccgcgagctgggaggtctcaac
cgaaccgcctcccacctccaaaccctcctcagcaccgtagcatcagctggattcagtgag
tcttaccgcagaatcctggcatcgctggaggcctcgcggcaggcagaggtggtggccaat
ggcacagctggcgagctacgcagggcgcagatgacgcagcgggagactgagcggctgctg
cggcagcggggcaacactttccgccgtggcacagctgcagcccggaaatccttgcgggag
gcacagaaacgggtgatgggactcaacgttactgggatcaatgagaagatttgtggggca
cccggagaccggagctgcgagcacgcgtcttgtggaggagccttgtgccgaaacagtgca
gggaaaaggcattgtggtggcactggttgtgcaggggcactgcctatatcagctcgagcc
ctgagcagtgcccaaaatgcctcacagcagctggaggtggcattagggcagctgggtgtt
gtggcacagaagatgcaggaggtgcaggagctggcacggggggcacggagccgggcagag
gaggcgctggggcgctcccaggctgcccgcagccatgcagagaaggcgacggcccagctg
cgggacttcatccgccgaatcaaggccttcctggcagaggagggagctgacccaggcagc
atcgagctggtggctcggcaggtgctgaacatctccctgcccagcagccccgaacagatc
cagcagctgctgtgggagatgcgggagagcatcagccagctagagggggtggatgcagtg
ctcaagagcacagcagaggggctggctgtggcacgggatctgctggcacagggacaggag
gccaggcaacgagcagaaggcataagggatgagctggtggggacacagcaggcactggag
gtggcacgaacacaggcaatgacagcaaggagcaccctgcagagcgccagggatgccatc
caggtggctgagaacagagccaaggaggcggagcgcagtctgcgggtgctggacaggaag
gagtcgcaggcacagaggcggctgcgggaattggcacagctcatcaccgccctgcaggag
agcagccaggatgctcgccacatggcccagcaggccaaggacggggcacagcgtgccacc
accacctcggggatgcttagccaggacctggcacaggtaacacagcgttatgtggtgctg
aagaaccgggtgggcttgctggacagggtgtctggtggggccctgcagcgtgtgtcgcag
ctgatggcagaggcccaagacctcctggataaggccagcaacagcaagaggaagctggaa
gatctggagcagcgctttggggccaatgaacggacgatggcggctaaagtgacacgactg
caggctttggagcagcaggtcaccgggctgttgcaggagatccgggagagagccaacgct
tacgccacctgctag
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